RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 NFIL3Q16649 462 aa7.52□□□□□ -1.21
CTNNA1-227ENST00000521387 ASTE1Q2TB18 679 aaPredicted RBP7.52□□□□□ -1.21
CTNNA1-227ENST00000521387 DEFB109BQ30KR1 87 aa7.52□□□□□ -1.21
CTNNA1-227ENST00000521387 POM121L1PQ3SYA9 428 aa7.52□□□□□ -1.21
CTNNA1-227ENST00000521387 TEX35Q5T0J7 233 aa7.52□□□□□ -1.21
CTNNA1-227ENST00000521387 CCDC122Q5T0U0 273 aa7.52□□□□□ -1.21
CTNNA1-227ENST00000521387 ATP1A1-AS1Q5TC04 95 aa7.52□□□□□ -1.21
CTNNA1-227ENST00000521387 TDRD10Q5VZ19 366 aaKnown RBP7.52□□□□□ -1.21
CTNNA1-227ENST00000521387 HGSNATQ68CP4 663 aa7.52□□□□□ -1.21
CTNNA1-227ENST00000521387 ZCCHC8Q6NZY4 707 aaKnown RBP7.52□□□□□ -1.21
CTNNA1-227ENST00000521387 ZPBP2Q6X784 338 aa7.52□□□□□ -1.21
CTNNA1-227ENST00000521387 ZNF720Q7Z2F6 126 aa7.52□□□□□ -1.21
CTNNA1-227ENST00000521387 DSG4Q86SJ6 1040 aa7.52□□□□□ -1.21
CTNNA1-227ENST00000521387 PRIMA1Q86XR5 153 aa7.52□□□□□ -1.21
CTNNA1-227ENST00000521387 AADATQ8N5Z0 425 aa7.52□□□□□ -1.21
CTNNA1-227ENST00000521387 OR6B3Q8NGW1 331 aa7.52□□□□□ -1.21
CTNNA1-227ENST00000521387 CXorf38Q8TB03 319 aa7.52□□□□□ -1.21
CTNNA1-227ENST00000521387 GANCQ8TET4 914 aa7.52□□□□□ -1.21
CTNNA1-227ENST00000521387 PMEPA1Q969W9 287 aa7.52□□□□□ -1.21
CTNNA1-227ENST00000521387 THAP11Q96EK4 314 aa7.52□□□□□ -1.21
CTNNA1-227ENST00000521387 CCDC42Q96M95 316 aa7.52□□□□□ -1.21
CTNNA1-227ENST00000521387 SLITRK1Q96PX8 696 aa7.52□□□□□ -1.21
CTNNA1-227ENST00000521387 CCDC3Q9BQI4 270 aa7.52□□□□□ -1.21
CTNNA1-227ENST00000521387 TUBB2BQ9BVA1 445 aa7.52□□□□□ -1.21
CTNNA1-227ENST00000521387 DUSP23Q9BVJ7 150 aa7.52□□□□□ -1.21
CTNNA1-227ENST00000521387 STRA6Q9BX79 667 aa7.52□□□□□ -1.21
CTNNA1-227ENST00000521387 FBRSQ9HAH7 460 aa7.52□□□□□ -1.21
CTNNA1-227ENST00000521387 OLFML3Q9NRN5 406 aa7.52□□□□□ -1.21
CTNNA1-227ENST00000521387 DMAC2Q9NW81 257 aa7.52□□□□□ -1.21
CTNNA1-227ENST00000521387 ZNF446Q9NWS9 450 aa7.52□□□□□ -1.21
CTNNA1-227ENST00000521387 DPP3Q9NY33 737 aa7.52□□□□□ -1.21
CTNNA1-227ENST00000521387 CPSF3Q9UKF6 684 aaKnown RBP7.52□□□□□ -1.21
CTNNA1-227ENST00000521387 NCKAP1Q9Y2A7 1128 aa7.52□□□□□ -1.21
CTNNA1-227ENST00000521387 NME7Q9Y5B8 376 aa7.52□□□□□ -1.21
CTNNA1-227ENST00000521387 DUSP10Q9Y6W6 482 aa7.52□□□□□ -1.21
CTNNA1-227ENST00000521387 ZNF891A8MT65 544 aaPredicted RBP7.51□□□□□ -1.21
CTNNA1-227ENST00000521387 PJA2O43164 708 aa7.51□□□□□ -1.21
CTNNA1-227ENST00000521387 TIMM44O43615 452 aa7.51□□□□□ -1.21
CTNNA1-227ENST00000521387 PRICKLE3O43900 615 aaPredicted RBP7.51□□□□□ -1.21
CTNNA1-227ENST00000521387 MAGEC1O60732 1142 aa7.51□□□□□ -1.21
CTNNA1-227ENST00000521387 RNASEH2AO75792 299 aaKnown RBP7.51□□□□□ -1.21
CTNNA1-227ENST00000521387 CNTN5O94779 1100 aa7.51□□□□□ -1.21
CTNNA1-227ENST00000521387 JMJD7P0C870 316 aa7.51□□□□□ -1.21
CTNNA1-227ENST00000521387 EPB41P11171 864 aaKnown RBP7.51□□□□□ -1.21
CTNNA1-227ENST00000521387 GUCY2CP25092 1073 aa7.51□□□□□ -1.21
CTNNA1-227ENST00000521387 RPL13P26373 211 aaKnown RBP7.51□□□□□ -1.21
CTNNA1-227ENST00000521387 YWHAQP27348 245 aa7.51□□□□□ -1.21
CTNNA1-227ENST00000521387 MAT2AP31153 395 aaKnown RBP7.51□□□□□ -1.21
CTNNA1-227ENST00000521387 CCKBRP32239 447 aa7.51□□□□□ -1.21
CTNNA1-227ENST00000521387 MAGEA1P43355 309 aa7.51□□□□□ -1.21
CTNNA1-227ENST00000521387 TUBP50607 506 aa7.51□□□□□ -1.21
CTNNA1-227ENST00000521387 CDC20Q12834 499 aa7.51□□□□□ -1.21
CTNNA1-227ENST00000521387 SPA17Q15506 151 aa7.51□□□□□ -1.21
CTNNA1-227ENST00000521387 INPP5JQ15735 1006 aaPredicted RBP7.51□□□□□ -1.21
CTNNA1-227ENST00000521387 NADK2Q4G0N4 442 aa7.51□□□□□ -1.21
CTNNA1-227ENST00000521387 FNDC3BQ53EP0 1204 aaKnown RBP7.51□□□□□ -1.21
CTNNA1-227ENST00000521387 ADIPOR2Q86V24 386 aa7.51□□□□□ -1.21
CTNNA1-227ENST00000521387 SLC35F3Q8IY50 421 aa7.51□□□□□ -1.21
CTNNA1-227ENST00000521387 SLC22A18ASQ8N1D0 253 aa7.51□□□□□ -1.21
CTNNA1-227ENST00000521387 TMEM145Q8NBT3 493 aa7.51□□□□□ -1.21
CTNNA1-227ENST00000521387 TMEM161BQ8NDZ6 487 aa7.51□□□□□ -1.21
CTNNA1-227ENST00000521387 SCAMP5Q8TAC9 235 aa7.51□□□□□ -1.21
CTNNA1-227ENST00000521387 SYN2Q92777 582 aaPredicted RBP7.51□□□□□ -1.21
CTNNA1-227ENST00000521387 GOLGA1Q92805 767 aa7.51□□□□□ -1.21
CTNNA1-227ENST00000521387 KLHDC7BQ96G42 594 aa7.51□□□□□ -1.21
CTNNA1-227ENST00000521387 MYO19Q96H55 970 aa7.51□□□□□ -1.21
CTNNA1-227ENST00000521387 PCED1BQ96HM7 432 aa7.51□□□□□ -1.21
CTNNA1-227ENST00000521387 SLC45A3Q96JT2 553 aa7.51□□□□□ -1.21
CTNNA1-227ENST00000521387 FAM84AQ96KN4 292 aa7.51□□□□□ -1.21
CTNNA1-227ENST00000521387 NOX5Q96PH1 765 aa7.51□□□□□ -1.21
CTNNA1-227ENST00000521387 NTPCRQ9BSD7 190 aaKnown RBP7.51□□□□□ -1.21
CTNNA1-227ENST00000521387 PARVGQ9HBI0 331 aa7.51□□□□□ -1.21
CTNNA1-227ENST00000521387 SIX2Q9NPC8 291 aa7.51□□□□□ -1.21
CTNNA1-227ENST00000521387 KMT5AQ9NQR1 393 aa7.51□□□□□ -1.21
CTNNA1-227ENST00000521387 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.51□□□□□ -1.212e-14■■■■■ 82
CTNNA1-227ENST00000521387 IL37Q9NZH6 218 aa7.51□□□□□ -1.21
CTNNA1-227ENST00000521387 ARMCX3Q9UH62 379 aaPredicted RBP7.51□□□□□ -1.21
CTNNA1-227ENST00000521387 KLF15Q9UIH9 416 aa7.51□□□□□ -1.21
CTNNA1-227ENST00000521387 AJAP1Q9UKB5 411 aaPredicted RBP7.51□□□□□ -1.21
CTNNA1-227ENST00000521387 ODF2LQ9ULJ1 636 aa7.51□□□□□ -1.21
CTNNA1-227ENST00000521387 MYO6Q9UM54 1294 aa7.51□□□□□ -1.21
CTNNA1-227ENST00000521387 PHTF1Q9UMS5 762 aa7.51□□□□□ -1.21
CTNNA1-227ENST00000521387 DERAQ9Y315 318 aa7.51□□□□□ -1.21
CTNNA1-227ENST00000521387 PRRC2AP48634 2157 aaKnown RBP7.51□□□□□ -1.21
CTNNA1-227ENST00000521387 UNC13CQ8NB66 2214 aa7.51□□□□□ -1.21
CTNNA1-227ENST00000521387 SSU72P8A0A1W2PR75 194 aa7.5□□□□□ -1.21
CTNNA1-227ENST00000521387 NEMP2A6NFY4 417 aa7.5□□□□□ -1.21
CTNNA1-227ENST00000521387 D6RAR5 112 aa7.5□□□□□ -1.21
CTNNA1-227ENST00000521387 SLC16A3O15427 465 aaKnown RBP7.5□□□□□ -1.21
CTNNA1-227ENST00000521387 KRT86O43790 486 aa7.5□□□□□ -1.21
CTNNA1-227ENST00000521387 AKR1B10O60218 316 aa7.5□□□□□ -1.21
CTNNA1-227ENST00000521387 MOCS3O95396 460 aa7.5□□□□□ -1.21
CTNNA1-227ENST00000521387 CBX6O95503 412 aa7.5□□□□□ -1.21
CTNNA1-227ENST00000521387 ATP1A1P05023 1023 aaKnown RBP7.5□□□□□ -1.21
CTNNA1-227ENST00000521387 SERPING1P05155 500 aa7.5□□□□□ -1.21
CTNNA1-227ENST00000521387 MAPTP10636 758 aaKnown RBP7.5□□□□□ -1.21
CTNNA1-227ENST00000521387 PON1P27169 355 aa7.5□□□□□ -1.21
CTNNA1-227ENST00000521387 ANXA13P27216 316 aa7.5□□□□□ -1.21
CTNNA1-227ENST00000521387 CD82P27701 267 aa7.5□□□□□ -1.21
CTNNA1-227ENST00000521387 ADRA1BP35368 520 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms