RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 ZNF556Q9HAH1 456 aa4.55□□□□□ -1.68
CLK4-207ENST00000520909 KRCC1Q9NPI7 259 aaPredicted RBP4.55□□□□□ -1.68
CLK4-207ENST00000520909 CDHR2Q9BYE9 1310 aa4.55□□□□□ -1.68
CLK4-207ENST00000520909 SCN5AQ14524 2016 aa4.54□□□□□ -1.68
CLK4-207ENST00000520909 A0A1B0GUV1 79 aa4.54□□□□□ -1.68
CLK4-207ENST00000520909 A0A1B0GVT2 93 aa4.54□□□□□ -1.68
CLK4-207ENST00000520909 CLEC18AA5D8T8 446 aa4.54□□□□□ -1.68
CLK4-207ENST00000520909 BECN2A8MW95 431 aa4.54□□□□□ -1.68
CLK4-207ENST00000520909 INAFM1C9JVW0 142 aa4.54□□□□□ -1.68
CLK4-207ENST00000520909 SOCS5O75159 536 aa4.54□□□□□ -1.68
CLK4-207ENST00000520909 ANXA2P07355 339 aaKnown RBP4.54□□□□□ -1.68
CLK4-207ENST00000520909 PDGFRBP09619 1106 aa4.54□□□□□ -1.68
CLK4-207ENST00000520909 RFPL3SP0C7P2 107 aa4.54□□□□□ -1.68
CLK4-207ENST00000520909 ARP10275 920 aa4.54□□□□□ -1.68
CLK4-207ENST00000520909 GYS1P13807 737 aa4.54□□□□□ -1.68
CLK4-207ENST00000520909 GSTM5P46439 218 aa4.54□□□□□ -1.68
CLK4-207ENST00000520909 RFX5P48382 616 aaPredicted RBP4.54□□□□□ -1.68
CLK4-207ENST00000520909 RASSF2P50749 326 aa4.54□□□□□ -1.68
CLK4-207ENST00000520909 MINDY4Q4G0A6 757 aa4.54□□□□□ -1.68
CLK4-207ENST00000520909 DARS2Q6PI48 645 aaKnown RBP4.54□□□□□ -1.68
CLK4-207ENST00000520909 SPSB3Q6PJ21 355 aa4.54□□□□□ -1.68
CLK4-207ENST00000520909 CCDC149Q6ZUS6 474 aa4.54□□□□□ -1.68
CLK4-207ENST00000520909 CYB5R4Q7L1T6 521 aa4.54□□□□□ -1.68
CLK4-207ENST00000520909 CLEC18CQ8NCF0 446 aa4.54□□□□□ -1.68
CLK4-207ENST00000520909 OTUD7AQ8TE49 926 aaPredicted RBP4.54□□□□□ -1.68
CLK4-207ENST00000520909 KIF1BPQ96EK5 621 aa4.54□□□□□ -1.68
CLK4-207ENST00000520909 EIF3CQ99613 913 aaKnown RBP4.54□□□□□ -1.68
CLK4-207ENST00000520909 ABHD14AQ9BUJ0 271 aa4.54□□□□□ -1.68
CLK4-207ENST00000520909 PRDM16Q9HAZ2 1276 aa4.54□□□□□ -1.68
CLK4-207ENST00000520909 AS3MTQ9HBK9 375 aa4.54□□□□□ -1.68
CLK4-207ENST00000520909 IL1RAPL2Q9NP60 686 aa4.54□□□□□ -1.68
CLK4-207ENST00000520909 NCKIPSDQ9NZQ3 722 aa4.54□□□□□ -1.68
CLK4-207ENST00000520909 TBC1D14Q9P2M4 693 aa4.54□□□□□ -1.68
CLK4-207ENST00000520909 ARFGEF2Q9Y6D5 1785 aa4.54□□□□□ -1.68
CLK4-207ENST00000520909 ZNF831Q5JPB2 1677 aa4.53□□□□□ -1.68
CLK4-207ENST00000520909 RREB1Q92766 1687 aa4.53□□□□□ -1.68
CLK4-207ENST00000520909 ANKRD18BA2A2Z9 1011 aa4.53□□□□□ -1.68
CLK4-207ENST00000520909 FOXO6A8MYZ6 492 aa4.53□□□□□ -1.68
CLK4-207ENST00000520909 EYA2O00167 538 aa4.53□□□□□ -1.68
CLK4-207ENST00000520909 GOLIM4O00461 696 aa4.53□□□□□ -1.68
CLK4-207ENST00000520909 ZSCAN9O15535 394 aaPredicted RBP4.53□□□□□ -1.68
CLK4-207ENST00000520909 SPRY3O43610 288 aa4.53□□□□□ -1.68
CLK4-207ENST00000520909 PRSS2P07478 247 aa4.53□□□□□ -1.68
CLK4-207ENST00000520909 IFIT2P09913 472 aaKnown RBP4.53□□□□□ -1.68
CLK4-207ENST00000520909 ALADP13716 330 aa4.53□□□□□ -1.68
CLK4-207ENST00000520909 TM4SF1P30408 202 aa4.53□□□□□ -1.68
CLK4-207ENST00000520909 DSC1Q08554 894 aa4.53□□□□□ -1.68
CLK4-207ENST00000520909 TFCP2Q12800 502 aa4.53□□□□□ -1.68
CLK4-207ENST00000520909 SLC15A2Q16348 729 aa4.53□□□□□ -1.68
CLK4-207ENST00000520909 CCDC152Q4G0S7 254 aa4.53□□□□□ -1.68
CLK4-207ENST00000520909 ARHGAP29Q52LW3 1261 aa4.53□□□□□ -1.68
CLK4-207ENST00000520909 KIAA1755Q5JYT7 1200 aa4.53□□□□□ -1.68
CLK4-207ENST00000520909 SLC10A5Q5PT55 438 aa4.53□□□□□ -1.68
CLK4-207ENST00000520909 CCDC144NLQ6NUI1 221 aa4.53□□□□□ -1.68
CLK4-207ENST00000520909 SLC16A12Q6ZSM3 486 aa4.53□□□□□ -1.68
CLK4-207ENST00000520909 AACSQ86V21 672 aa4.53□□□□□ -1.68
CLK4-207ENST00000520909 GPSM1Q86YR5 675 aa4.53□□□□□ -1.68
CLK4-207ENST00000520909 CNBD1Q8NA66 436 aa4.53□□□□□ -1.68
CLK4-207ENST00000520909 PUS3Q9BZE2 481 aaKnown RBP4.53□□□□□ -1.68
CLK4-207ENST00000520909 G3BP2Q9UN86 482 aaKnown RBP4.53□□□□□ -1.68
CLK4-207ENST00000520909 B3GNT3Q9Y2A9 372 aa4.53□□□□□ -1.68
CLK4-207ENST00000520909 LY75O60449 1722 aa4.53□□□□□ -1.68
CLK4-207ENST00000520909 C4BP0C0L5 1744 aa4.53□□□□□ -1.68
CLK4-207ENST00000520909 COL5A3P25940 1745 aaPredicted RBP4.53□□□□□ -1.68
CLK4-207ENST00000520909 NUP188Q5SRE5 1749 aa4.53□□□□□ -1.68
CLK4-207ENST00000520909 CICQ96RK0 1608 aaPredicted RBP4.53□□□□□ -1.68
CLK4-207ENST00000520909 N4BP2Q86UW6 1770 aaPredicted RBP4.53□□□□□ -1.68
CLK4-207ENST00000520909 AFDNP55196 1824 aaKnown RBP4.52□□□□□ -1.69
CLK4-207ENST00000520909 CARMIL3Q8ND23 1372 aa4.52□□□□□ -1.69
CLK4-207ENST00000520909 KRTAP9-6A8MVA2 160 aa4.52□□□□□ -1.69
CLK4-207ENST00000520909 RGS14O43566 566 aa4.52□□□□□ -1.69
CLK4-207ENST00000520909 CIAO1O76071 339 aa4.52□□□□□ -1.69
CLK4-207ENST00000520909 DDNO94850 711 aaPredicted RBP4.52□□□□□ -1.69
CLK4-207ENST00000520909 GLUD1P00367 558 aa4.52□□□□□ -1.69
CLK4-207ENST00000520909 SERPINB2P05120 415 aa4.52□□□□□ -1.69
CLK4-207ENST00000520909 ARSBP15848 533 aa4.52□□□□□ -1.69
CLK4-207ENST00000520909 RPL17P18621 184 aaKnown RBP4.52□□□□□ -1.69
CLK4-207ENST00000520909 MX1P20591 662 aa4.52□□□□□ -1.69
CLK4-207ENST00000520909 IL15P40933 162 aaPredicted RBP4.52□□□□□ -1.69
CLK4-207ENST00000520909 GLUD2P49448 558 aa4.52□□□□□ -1.69
CLK4-207ENST00000520909 EPHB1P54762 984 aa4.52□□□□□ -1.69
CLK4-207ENST00000520909 DDR1Q08345 913 aa4.52□□□□□ -1.69
CLK4-207ENST00000520909 GPS2Q13227 327 aa4.52□□□□□ -1.69
CLK4-207ENST00000520909 GPR18Q14330 331 aa4.52□□□□□ -1.69
CLK4-207ENST00000520909 KIAA0753Q2KHM9 967 aa4.52□□□□□ -1.69
CLK4-207ENST00000520909 LRRC24Q50LG9 513 aa4.52□□□□□ -1.69
CLK4-207ENST00000520909 FAXCQ5TGI0 409 aa4.52□□□□□ -1.69
CLK4-207ENST00000520909 OTUD1Q5VV17 481 aaPredicted RBP4.52□□□□□ -1.69
CLK4-207ENST00000520909 RRAGBQ5VZM2 374 aa4.52□□□□□ -1.69
CLK4-207ENST00000520909 PRR5LQ6MZQ0 368 aa4.52□□□□□ -1.69
CLK4-207ENST00000520909 LDHAL6AQ6ZMR3 332 aa4.52□□□□□ -1.69
CLK4-207ENST00000520909 ATG9AQ7Z3C6 839 aa4.52□□□□□ -1.69
CLK4-207ENST00000520909 OR52N4Q8NGI2 321 aa4.52□□□□□ -1.69
CLK4-207ENST00000520909 NEUROD6Q96NK8 337 aa4.52□□□□□ -1.69
CLK4-207ENST00000520909 ZNF347Q96SE7 839 aa4.52□□□□□ -1.69
CLK4-207ENST00000520909 FZD10Q9ULW2 581 aa4.52□□□□□ -1.69
CLK4-207ENST00000520909 NUP98P52948 1817 aa4.52□□□□□ -1.69
CLK4-207ENST00000520909 ABCC12Q96J65 1359 aa4.51□□□□□ -1.69
CLK4-207ENST00000520909 hCG_2014768A0A024R1R8 64 aa4.51□□□□□ -1.69
CLK4-207ENST00000520909 SMTNL1A8MU46 457 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms