RNA–Protein interactions for RNA: ENST00000519540.5

FAM49B-214, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-214ENST00000519540 IHHQ14623 411 aa18.74■□□□□ 0.59
FAM49B-214ENST00000519540 LBRQ14739 615 aaKnown RBP18.74■□□□□ 0.59
FAM49B-214ENST00000519540 PCSK7Q16549 785 aa18.74■□□□□ 0.59
FAM49B-214ENST00000519540 ADGRF1Q5T601 910 aa18.74■□□□□ 0.59
FAM49B-214ENST00000519540 FIBCD1Q8N539 461 aa18.74■□□□□ 0.59
FAM49B-214ENST00000519540 STARD13Q9Y3M8 1113 aa18.74■□□□□ 0.59
FAM49B-214ENST00000519540 CHD5Q8TDI0 1954 aa18.73■□□□□ 0.59
FAM49B-214ENST00000519540 FGBP02675 491 aa18.73■□□□□ 0.59
FAM49B-214ENST00000519540 IRF1P10914 325 aa18.73■□□□□ 0.59
FAM49B-214ENST00000519540 ETFBP38117 255 aa18.73■□□□□ 0.59
FAM49B-214ENST00000519540 CHRNA4P43681 627 aa18.73■□□□□ 0.59
FAM49B-214ENST00000519540 CORO7P57737 925 aa18.73■□□□□ 0.59
FAM49B-214ENST00000519540 RNF187Q5TA31 235 aaPredicted RBP18.73■□□□□ 0.59
FAM49B-214ENST00000519540 STRA8Q7Z7C7 330 aa18.73■□□□□ 0.59
FAM49B-214ENST00000519540 ITIH5Q86UX2 942 aa18.73■□□□□ 0.59
FAM49B-214ENST00000519540 OTUD6BQ8N6M0 293 aa18.73■□□□□ 0.59
FAM49B-214ENST00000519540 PPHLN1Q8NEY8 458 aaKnown RBP18.73■□□□□ 0.59
FAM49B-214ENST00000519540 OR52K2Q8NGK3 314 aa18.73■□□□□ 0.59
FAM49B-214ENST00000519540 ARRDC2Q8TBH0 407 aa18.73■□□□□ 0.59
FAM49B-214ENST00000519540 PTCD2Q8WV60 388 aaKnown RBP18.73■□□□□ 0.59
FAM49B-214ENST00000519540 TADA1Q96BN2 335 aa18.73■□□□□ 0.59
FAM49B-214ENST00000519540 CYP2S1Q96SQ9 504 aa18.73■□□□□ 0.59
FAM49B-214ENST00000519540 RBBP8Q99708 897 aa18.73■□□□□ 0.59
FAM49B-214ENST00000519540 MANSC1Q9H8J5 431 aa18.73■□□□□ 0.59
FAM49B-214ENST00000519540 IL21Q9HBE4 155 aa18.73■□□□□ 0.59
FAM49B-214ENST00000519540 PDFQ9HBH1 243 aa18.73■□□□□ 0.59
FAM49B-214ENST00000519540 ATP13A1Q9HD20 1204 aa18.73■□□□□ 0.59
FAM49B-214ENST00000519540 PRKAG3Q9UGI9 489 aa18.73■□□□□ 0.59
FAM49B-214ENST00000519540 CCDC78A2IDD5 438 aa18.73■□□□□ 0.59
FAM49B-214ENST00000519540 TPP1O14773 563 aa18.73■□□□□ 0.59
FAM49B-214ENST00000519540 CLDN11O75508 207 aa18.73■□□□□ 0.59
FAM49B-214ENST00000519540 PDE1BQ01064 536 aa18.73■□□□□ 0.59
FAM49B-214ENST00000519540 TMCO4Q5TGY1 634 aa18.73■□□□□ 0.59
FAM49B-214ENST00000519540 PDPK2PQ6A1A2 396 aa18.73■□□□□ 0.59
FAM49B-214ENST00000519540 ZFRQ96KR1 1074 aaKnown RBP18.73■□□□□ 0.59
FAM49B-214ENST00000519540 ZNF599Q96NL3 588 aa18.73■□□□□ 0.59
FAM49B-214ENST00000519540 ALG13Q9NP73 1137 aaKnown RBP18.73■□□□□ 0.59
FAM49B-214ENST00000519540 SSX2IPQ9Y2D8 614 aa18.73■□□□□ 0.59
FAM49B-214ENST00000519540 TCAF1Q9Y4C2 921 aa18.73■□□□□ 0.59
FAM49B-214ENST00000519540 TTC24A2A3L6 582 aaPredicted RBP18.72■□□□□ 0.59
FAM49B-214ENST00000519540 CCT8L1PA6NM43 557 aa18.72■□□□□ 0.59
FAM49B-214ENST00000519540 TGM5O43548 720 aa18.72■□□□□ 0.59
FAM49B-214ENST00000519540 MBL2P11226 248 aaPredicted RBP18.72■□□□□ 0.59
FAM49B-214ENST00000519540 HOXD9P28356 352 aaPredicted RBP18.72■□□□□ 0.59
FAM49B-214ENST00000519540 SPRP35270 261 aaPredicted RBP18.72■□□□□ 0.59
FAM49B-214ENST00000519540 SERPINB4P48594 390 aa18.72■□□□□ 0.59
FAM49B-214ENST00000519540 SGSHP51688 502 aa18.72■□□□□ 0.59
FAM49B-214ENST00000519540 PABPC1LQ4VXU2 614 aaKnown RBP18.72■□□□□ 0.59
FAM49B-214ENST00000519540 CCDC121Q6ZUS5 278 aa18.72■□□□□ 0.59
FAM49B-214ENST00000519540 OR7D4Q8NG98 312 aa18.72■□□□□ 0.59
FAM49B-214ENST00000519540 CCT6BQ92526 530 aa18.72■□□□□ 0.59
FAM49B-214ENST00000519540 PTPRN2Q92932 1015 aa18.72■□□□□ 0.59
FAM49B-214ENST00000519540 CLP1Q92989 425 aaKnown RBP18.72■□□□□ 0.59
FAM49B-214ENST00000519540 SLC22A12Q96S37 553 aa18.72■□□□□ 0.59
FAM49B-214ENST00000519540 MRM3Q9HC36 420 aaKnown RBP18.72■□□□□ 0.59
FAM49B-214ENST00000519540 IARS2Q9NSE4 1012 aaKnown RBP18.72■□□□□ 0.59
FAM49B-214ENST00000519540 SMPD4Q9NXE4 827 aa18.72■□□□□ 0.59
FAM49B-214ENST00000519540 ARL2BPQ9Y2Y0 163 aa18.72■□□□□ 0.59
FAM49B-214ENST00000519540 CA8P35219 290 aa18.71■□□□□ 0.59
FAM49B-214ENST00000519540 NUMBP49757 651 aa18.71■□□□□ 0.59
FAM49B-214ENST00000519540 LIMK2P53671 638 aa18.71■□□□□ 0.59
FAM49B-214ENST00000519540 PDE1CQ14123 709 aaPredicted RBP18.71■□□□□ 0.59
FAM49B-214ENST00000519540 SLC25A41Q8N5S1 370 aa18.71■□□□□ 0.59
FAM49B-214ENST00000519540 KLHL23Q8NBE8 558 aa18.71■□□□□ 0.59
FAM49B-214ENST00000519540 MCMBPQ9BTE3 642 aa18.71■□□□□ 0.59
FAM49B-214ENST00000519540 STOML2Q9UJZ1 356 aa18.71■□□□□ 0.59
FAM49B-214ENST00000519540 ASB3Q9Y575 518 aa18.71■□□□□ 0.59
FAM49B-214ENST00000519540 INSL6Q9Y581 213 aa18.71■□□□□ 0.59
FAM49B-214ENST00000519540 SMAD3P84022 425 aaKnown RBP18.71■□□□□ 0.59
FAM49B-214ENST00000519540 PPIGQ13427 754 aaKnown RBP eCLIP18.71■□□□□ 0.59
FAM49B-214ENST00000519540 IL31Q6EBC2 164 aa18.71■□□□□ 0.59
FAM49B-214ENST00000519540 FSTL4Q6MZW2 842 aa18.71■□□□□ 0.59
FAM49B-214ENST00000519540 ESRP1Q6NXG1 681 aaKnown RBP18.71■□□□□ 0.59
FAM49B-214ENST00000519540 CHST9Q7L1S5 443 aa18.71■□□□□ 0.59
FAM49B-214ENST00000519540 CCDC63Q8NA47 563 aa18.71■□□□□ 0.59
FAM49B-214ENST00000519540 ARMC2Q8NEN0 867 aa18.71■□□□□ 0.59
FAM49B-214ENST00000519540 DDX50Q9BQ39 737 aaKnown RBP18.71■□□□□ 0.59
FAM49B-214ENST00000519540 ZBED2Q9BTP6 218 aa18.71■□□□□ 0.59
FAM49B-214ENST00000519540 POLR1EQ9GZS1 481 aaKnown RBP18.71■□□□□ 0.59
FAM49B-214ENST00000519540 TRPC7Q9HCX4 862 aa18.71■□□□□ 0.59
FAM49B-214ENST00000519540 MYLKQ15746 1914 aa18.7■□□□□ 0.58
FAM49B-214ENST00000519540 PLXNA4Q9HCM2 1894 aa18.7■□□□□ 0.58
FAM49B-214ENST00000519540 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.7■□□□□ 0.58
FAM49B-214ENST00000519540 A0A1B0GVM2 712 aa18.7■□□□□ 0.58
FAM49B-214ENST00000519540 ILVBLA1L0T0 632 aa18.7■□□□□ 0.58
FAM49B-214ENST00000519540 TCAF2A6NFQ2 919 aa18.7■□□□□ 0.58
FAM49B-214ENST00000519540 GOLGA8TH3BQL2 631 aa18.7■□□□□ 0.58
FAM49B-214ENST00000519540 MUSKO15146 869 aa18.7■□□□□ 0.58
FAM49B-214ENST00000519540 KDELR3O43731 214 aa18.7■□□□□ 0.58
FAM49B-214ENST00000519540 TSPAN3O60637 253 aa18.7■□□□□ 0.58
FAM49B-214ENST00000519540 CXCL14O95715 111 aa18.7■□□□□ 0.58
FAM49B-214ENST00000519540 ARCN1P48444 511 aaKnown RBP18.7■□□□□ 0.58
FAM49B-214ENST00000519540 CSE1LP55060 971 aaKnown RBP18.7■□□□□ 0.58
FAM49B-214ENST00000519540 ZNF177Q13360 481 aaPredicted RBP18.7■□□□□ 0.58
FAM49B-214ENST00000519540 MSLNQ13421 630 aaPredicted RBP18.7■□□□□ 0.58
FAM49B-214ENST00000519540 ZNF235Q14590 738 aa18.7■□□□□ 0.58
FAM49B-214ENST00000519540 STXBP5Q5T5C0 1151 aa18.7■□□□□ 0.58
FAM49B-214ENST00000519540 ARMC3Q5W041 872 aa18.7■□□□□ 0.58
FAM49B-214ENST00000519540 TXNDC8Q6A555 127 aa18.7■□□□□ 0.58
FAM49B-214ENST00000519540 LILRA6Q6PI73 481 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms