RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 MYEOVQ96EZ4 313 aa6.98□□□□□ -1.29
CTNNA1-216ENST00000519489 C14orf79Q96F83 325 aa6.98□□□□□ -1.29
CTNNA1-216ENST00000519489 ZNF560Q96MR9 790 aa6.98□□□□□ -1.29
CTNNA1-216ENST00000519489 SMOQ99835 787 aa6.98□□□□□ -1.29
CTNNA1-216ENST00000519489 CTRCQ99895 268 aa6.98□□□□□ -1.29
CTNNA1-216ENST00000519489 NUDT22Q9BRQ3 303 aa6.98□□□□□ -1.29
CTNNA1-216ENST00000519489 MCCC2Q9HCC0 563 aa6.98□□□□□ -1.29
CTNNA1-216ENST00000519489 SVEP1Q4LDE5 3571 aa6.98□□□□□ -1.29
CTNNA1-216ENST00000519489 IGHV5-10-1A0A0J9YXX1 117 aa6.97□□□□□ -1.29
CTNNA1-216ENST00000519489 STAU1O95793 577 aaKnown RBP6.97□□□□□ -1.29
CTNNA1-216ENST00000519489 HNRNPA2B1P22626 353 aaKnown RBP6.97□□□□□ -1.29
CTNNA1-216ENST00000519489 NFKBIAP25963 317 aa6.97□□□□□ -1.29
CTNNA1-216ENST00000519489 DNAJA1P31689 397 aaKnown RBP6.97□□□□□ -1.29
CTNNA1-216ENST00000519489 CHKAP35790 457 aa6.97□□□□□ -1.29
CTNNA1-216ENST00000519489 CSKP41240 450 aa6.97□□□□□ -1.29
CTNNA1-216ENST00000519489 PNPLA4P41247 253 aa6.97□□□□□ -1.29
CTNNA1-216ENST00000519489 ABL2P42684 1182 aa6.97□□□□□ -1.29
CTNNA1-216ENST00000519489 CCT2P78371 535 aaKnown RBP6.97□□□□□ -1.29
CTNNA1-216ENST00000519489 B4GALNT1Q00973 533 aa6.97□□□□□ -1.29
CTNNA1-216ENST00000519489 AKAP17AQ02040 695 aaKnown RBP6.97□□□□□ -1.29
CTNNA1-216ENST00000519489 DPYDQ12882 1025 aa6.97□□□□□ -1.29
CTNNA1-216ENST00000519489 E2F5Q15329 346 aa6.97□□□□□ -1.29
CTNNA1-216ENST00000519489 KYAT1Q16773 422 aa6.97□□□□□ -1.29
CTNNA1-216ENST00000519489 PLA2G4EQ3MJ16 856 aa6.97□□□□□ -1.29
CTNNA1-216ENST00000519489 DCAF10Q5QP82 559 aa6.97□□□□□ -1.29
CTNNA1-216ENST00000519489 PIP5KL1Q5T9C9 394 aa6.97□□□□□ -1.29
CTNNA1-216ENST00000519489 KCTD16Q68DU8 428 aa6.97□□□□□ -1.29
CTNNA1-216ENST00000519489 B4GALNT3Q6L9W6 998 aa6.97□□□□□ -1.29
CTNNA1-216ENST00000519489 RINT1Q6NUQ1 792 aa6.97□□□□□ -1.29
CTNNA1-216ENST00000519489 BNC2Q6ZN30 1099 aaPredicted RBP6.97□□□□□ -1.29
CTNNA1-216ENST00000519489 MMS22LQ6ZRQ5 1243 aa6.97□□□□□ -1.29
CTNNA1-216ENST00000519489 NXPE1Q8N323 547 aa6.97□□□□□ -1.29
CTNNA1-216ENST00000519489 LRRC52Q8N7C0 313 aa6.97□□□□□ -1.29
CTNNA1-216ENST00000519489 GOLGA6L1Q8N7Z2 621 aa6.97□□□□□ -1.29
CTNNA1-216ENST00000519489 BMPERQ8N8U9 685 aa6.97□□□□□ -1.29
CTNNA1-216ENST00000519489 PCDH19Q8TAB3 1148 aa6.97□□□□□ -1.29
CTNNA1-216ENST00000519489 PNPLA2Q96AD5 504 aa6.97□□□□□ -1.29
CTNNA1-216ENST00000519489 HDAC11Q96DB2 347 aa6.97□□□□□ -1.29
CTNNA1-216ENST00000519489 RTP4Q96DX8 246 aa6.97□□□□□ -1.29
CTNNA1-216ENST00000519489 TMEM121Q9BTD3 319 aa6.97□□□□□ -1.29
CTNNA1-216ENST00000519489 DDA1Q9BW61 102 aa6.97□□□□□ -1.29
CTNNA1-216ENST00000519489 INTS2Q9H0H0 1204 aaKnown RBP6.97□□□□□ -1.29
CTNNA1-216ENST00000519489 POLHQ9Y253 713 aa6.97□□□□□ -1.29
CTNNA1-216ENST00000519489 PCDHGA9Q9Y5G4 932 aaKnown RBP6.97□□□□□ -1.29
CTNNA1-216ENST00000519489 UNC13CQ8NB66 2214 aa6.97□□□□□ -1.29
CTNNA1-216ENST00000519489 NPHP3-ACAD11A0A0J9YXS1 232 aa6.96□□□□□ -1.3
CTNNA1-216ENST00000519489 CCDC196A0A1B0GTZ2 297 aa6.96□□□□□ -1.3
CTNNA1-216ENST00000519489 A6NNZ2 444 aa6.96□□□□□ -1.3
CTNNA1-216ENST00000519489 SHISA8B8ZZ34 492 aa6.96□□□□□ -1.3
CTNNA1-216ENST00000519489 HHLA1C9JL84 531 aa6.96□□□□□ -1.3
CTNNA1-216ENST00000519489 DLGAP3O95886 979 aa6.96□□□□□ -1.3
CTNNA1-216ENST00000519489 PLS3P13797 630 aa6.96□□□□□ -1.3
CTNNA1-216ENST00000519489 MAP4P27816 1152 aaKnown RBP6.96□□□□□ -1.3
CTNNA1-216ENST00000519489 AKT2P31751 481 aa6.96□□□□□ -1.3
CTNNA1-216ENST00000519489 STAT5AP42229 794 aa6.96□□□□□ -1.3
CTNNA1-216ENST00000519489 NUMBP49757 651 aa6.96□□□□□ -1.3
CTNNA1-216ENST00000519489 STK19P49842 368 aaPredicted RBP6.96□□□□□ -1.3
CTNNA1-216ENST00000519489 LIG4P49917 911 aa6.96□□□□□ -1.3
CTNNA1-216ENST00000519489 COPB1P53618 953 aaKnown RBP6.96□□□□□ -1.3
CTNNA1-216ENST00000519489 PER3P56645 1201 aa6.96□□□□□ -1.3
CTNNA1-216ENST00000519489 TFAMQ00059 246 aaKnown RBP6.96□□□□□ -1.3
CTNNA1-216ENST00000519489 MC1RQ01726 317 aa6.96□□□□□ -1.3
CTNNA1-216ENST00000519489 ABHD18Q0P651 414 aa6.96□□□□□ -1.3
CTNNA1-216ENST00000519489 PDE1CQ14123 709 aaPredicted RBP6.96□□□□□ -1.3
CTNNA1-216ENST00000519489 MCM6Q14566 821 aa6.96□□□□□ -1.3
CTNNA1-216ENST00000519489 MAPRE1Q15691 268 aaKnown RBP6.96□□□□□ -1.3
CTNNA1-216ENST00000519489 C10orf120Q5SQS8 335 aa6.96□□□□□ -1.3
CTNNA1-216ENST00000519489 ESRP1Q6NXG1 681 aaKnown RBP6.96□□□□□ -1.3
CTNNA1-216ENST00000519489 KLHDC10Q6PID8 442 aa6.96□□□□□ -1.3
CTNNA1-216ENST00000519489 FIGNL1Q6PIW4 674 aa6.96□□□□□ -1.3
CTNNA1-216ENST00000519489 KYAT3Q6YP21 454 aaKnown RBP6.96□□□□□ -1.3
CTNNA1-216ENST00000519489 HORMAD1Q86X24 394 aa6.96□□□□□ -1.3
CTNNA1-216ENST00000519489 PHACTR4Q8IZ21 702 aa6.96□□□□□ -1.3
CTNNA1-216ENST00000519489 CSGALNACT2Q8N6G5 542 aa6.96□□□□□ -1.3
CTNNA1-216ENST00000519489 NUDT8Q8WV74 236 aa6.96□□□□□ -1.3
CTNNA1-216ENST00000519489 GLMNQ92990 594 aa6.96□□□□□ -1.3
CTNNA1-216ENST00000519489 KIAA1143Q96AT1 154 aaPredicted RBP6.96□□□□□ -1.3
CTNNA1-216ENST00000519489 BICD1Q96G01 975 aa6.96□□□□□ -1.3
CTNNA1-216ENST00000519489 CCDC74BQ96LY2 380 aa6.96□□□□□ -1.3
CTNNA1-216ENST00000519489 KLF6Q99612 283 aaPredicted RBP6.96□□□□□ -1.3
CTNNA1-216ENST00000519489 FOXC2Q99958 501 aa6.96□□□□□ -1.3
CTNNA1-216ENST00000519489 SLC25A23Q9BV35 468 aa6.96□□□□□ -1.3
CTNNA1-216ENST00000519489 ELOVL4Q9GZR5 314 aa6.96□□□□□ -1.3
CTNNA1-216ENST00000519489 APMAPQ9HDC9 416 aa6.96□□□□□ -1.3
CTNNA1-216ENST00000519489 SLC39A1Q9NY26 324 aa6.96□□□□□ -1.3
CTNNA1-216ENST00000519489 TMEM9Q9P0T7 183 aa6.96□□□□□ -1.3
CTNNA1-216ENST00000519489 APOBEC3BQ9UH17 382 aaKnown RBP6.96□□□□□ -1.3
CTNNA1-216ENST00000519489 APPL1Q9UKG1 709 aa6.96□□□□□ -1.3
CTNNA1-216ENST00000519489 KIAA1024Q9UPX6 916 aa6.96□□□□□ -1.3
CTNNA1-216ENST00000519489 ITIH6Q6UXX5 1313 aa6.96□□□□□ -1.3
CTNNA1-216ENST00000519489 EDDM13A0A1B0GTR0 161 aa6.95□□□□□ -1.3
CTNNA1-216ENST00000519489 HNRNPDLO14979 420 aaKnown RBP6.95□□□□□ -1.3
CTNNA1-216ENST00000519489 SLC7A4O43246 635 aa6.95□□□□□ -1.3
CTNNA1-216ENST00000519489 ATP5BP06576 529 aaKnown RBP6.95□□□□□ -1.3
CTNNA1-216ENST00000519489 ANXA6P08133 673 aa6.95□□□□□ -1.3
CTNNA1-216ENST00000519489 PLA2G4BP0C869 781 aa6.95□□□□□ -1.3
CTNNA1-216ENST00000519489 BMP4P12644 408 aa6.95□□□□□ -1.3
CTNNA1-216ENST00000519489 POLR2EP19388 210 aaKnown RBP6.95□□□□□ -1.3
CTNNA1-216ENST00000519489 PDCP20941 246 aa6.95□□□□□ -1.3
CTNNA1-216ENST00000519489 MPSTP25325 297 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms