RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 KCNU1A8MYU2 1149 aa13.73□□□□□ -0.21
PABPC1-208ENST00000519004 AXIN1O15169 862 aa13.73□□□□□ -0.21
PABPC1-208ENST00000519004 NADKO95544 446 aaPredicted RBP13.73□□□□□ -0.21
PABPC1-208ENST00000519004 M6PRP20645 277 aa13.73□□□□□ -0.21
PABPC1-208ENST00000519004 ACO1P21399 889 aaKnown RBP13.73□□□□□ -0.21
PABPC1-208ENST00000519004 MPP1Q00013 466 aa13.73□□□□□ -0.21
PABPC1-208ENST00000519004 ROR1Q01973 937 aa13.73□□□□□ -0.21
PABPC1-208ENST00000519004 CNTN2Q02246 1040 aa13.73□□□□□ -0.21
PABPC1-208ENST00000519004 EN1Q05925 392 aaPredicted RBP13.73□□□□□ -0.21
PABPC1-208ENST00000519004 PIGHQ14442 188 aaPredicted RBP13.73□□□□□ -0.21
PABPC1-208ENST00000519004 PLCL1Q15111 1095 aa13.73□□□□□ -0.21
PABPC1-208ENST00000519004 INSCQ1MX18 579 aa13.73□□□□□ -0.21
PABPC1-208ENST00000519004 SNAP47Q5SQN1 464 aa13.73□□□□□ -0.21
PABPC1-208ENST00000519004 WDR78Q5VTH9 848 aa13.73□□□□□ -0.21
PABPC1-208ENST00000519004 BROXQ5VW32 411 aa13.73□□□□□ -0.21
PABPC1-208ENST00000519004 ZCCHC8Q6NZY4 707 aaKnown RBP13.73□□□□□ -0.21
PABPC1-208ENST00000519004 SPRED1Q7Z699 444 aa13.73□□□□□ -0.21
PABPC1-208ENST00000519004 SLC51BQ86UW2 128 aa13.73□□□□□ -0.21
PABPC1-208ENST00000519004 TXNRD3Q86VQ6 643 aa13.73□□□□□ -0.21
PABPC1-208ENST00000519004 LACC1Q8IV20 430 aa13.73□□□□□ -0.21
PABPC1-208ENST00000519004 UNC5BQ8IZJ1 945 aa13.73□□□□□ -0.21
PABPC1-208ENST00000519004 DEPDC4Q8N2C3 294 aa13.73□□□□□ -0.21
PABPC1-208ENST00000519004 NIPA2Q8N8Q9 360 aa13.73□□□□□ -0.21
PABPC1-208ENST00000519004 SPATA18Q8TC71 538 aa13.73□□□□□ -0.21
PABPC1-208ENST00000519004 MTMR12Q9C0I1 747 aa13.73□□□□□ -0.21
PABPC1-208ENST00000519004 KCNN3Q9UGI6 736 aa13.73□□□□□ -0.21
PABPC1-208ENST00000519004 ARIH1Q9Y4X5 557 aaPredicted RBP13.73□□□□□ -0.21
PABPC1-208ENST00000519004 COPG1Q9Y678 874 aaKnown RBP13.73□□□□□ -0.21
PABPC1-208ENST00000519004 RNF103-CHMP3A0A140T963 221 aa13.73□□□□□ -0.21
PABPC1-208ENST00000519004 H7C0C1 242 aa13.73□□□□□ -0.21
PABPC1-208ENST00000519004 HDAC3O15379 428 aa13.73□□□□□ -0.21
PABPC1-208ENST00000519004 ABCB7O75027 752 aa13.73□□□□□ -0.21
PABPC1-208ENST00000519004 RASAL1O95294 804 aa13.73□□□□□ -0.21
PABPC1-208ENST00000519004 NTRK1P04629 796 aa13.73□□□□□ -0.21
PABPC1-208ENST00000519004 CHRNGP07510 517 aa13.73□□□□□ -0.21
PABPC1-208ENST00000519004 MAPTP10636 758 aaKnown RBP13.73□□□□□ -0.21
PABPC1-208ENST00000519004 C7P10643 843 aa13.73□□□□□ -0.21
PABPC1-208ENST00000519004 SPNP16150 400 aa13.73□□□□□ -0.21
PABPC1-208ENST00000519004 HTR1BP28222 390 aa13.73□□□□□ -0.21
PABPC1-208ENST00000519004 ELK4P28324 431 aa13.73□□□□□ -0.21
PABPC1-208ENST00000519004 GNA15P30679 374 aa13.73□□□□□ -0.21
PABPC1-208ENST00000519004 VAC14Q08AM6 782 aa13.73□□□□□ -0.21
PABPC1-208ENST00000519004 CTF1Q16619 201 aa13.73□□□□□ -0.21
PABPC1-208ENST00000519004 PAGE2BQ5JRK9 111 aa13.73□□□□□ -0.21
PABPC1-208ENST00000519004 DNAJC24Q6P3W2 148 aa13.73□□□□□ -0.21
PABPC1-208ENST00000519004 DARS2Q6PI48 645 aaKnown RBP13.73□□□□□ -0.21
PABPC1-208ENST00000519004 NPNTQ6UXI9 565 aa13.73□□□□□ -0.21
PABPC1-208ENST00000519004 GK5Q6ZS86 529 aa13.73□□□□□ -0.21
PABPC1-208ENST00000519004 LDHDQ86WU2 507 aa13.73□□□□□ -0.21
PABPC1-208ENST00000519004 RFX6Q8HWS3 928 aa13.73□□□□□ -0.21
PABPC1-208ENST00000519004 THNSL1Q8IYQ7 743 aa13.73□□□□□ -0.21
PABPC1-208ENST00000519004 DHRSXQ8N5I4 330 aa13.73□□□□□ -0.21
PABPC1-208ENST00000519004 OR6Q1Q8NGQ2 317 aa13.73□□□□□ -0.21
PABPC1-208ENST00000519004 RASSF5Q8WWW0 418 aa13.73□□□□□ -0.21
PABPC1-208ENST00000519004 LRRC39Q96DD0 335 aa13.73□□□□□ -0.21
PABPC1-208ENST00000519004 SIGLEC10Q96LC7 697 aa13.73□□□□□ -0.21
PABPC1-208ENST00000519004 SNX18Q96RF0 628 aa13.73□□□□□ -0.21
PABPC1-208ENST00000519004 COQ7Q99807 217 aa13.73□□□□□ -0.21
PABPC1-208ENST00000519004 C9orf16Q9BUW7 83 aa13.73□□□□□ -0.21
PABPC1-208ENST00000519004 RUBCNLQ9H714 662 aa13.73□□□□□ -0.21
PABPC1-208ENST00000519004 AGPAT4Q9NRZ5 378 aa13.73□□□□□ -0.21
PABPC1-208ENST00000519004 SLCO3A1Q9UIG8 710 aa13.73□□□□□ -0.21
PABPC1-208ENST00000519004 VWA7Q9Y334 891 aa13.73□□□□□ -0.21
PABPC1-208ENST00000519004 PCDHA11Q9Y5I1 949 aa13.73□□□□□ -0.21
PABPC1-208ENST00000519004 IGLV3-22A0A075B6J6 115 aa13.72□□□□□ -0.21
PABPC1-208ENST00000519004 SPDYE2BA6NHP3 402 aa13.72□□□□□ -0.21
PABPC1-208ENST00000519004 ERVH48-1M5A8F1 160 aa13.72□□□□□ -0.21
PABPC1-208ENST00000519004 GRID2O43424 1007 aa13.72□□□□□ -0.21
PABPC1-208ENST00000519004 GAS7O60861 476 aa13.72□□□□□ -0.21
PABPC1-208ENST00000519004 PSMD10O75832 226 aa13.72□□□□□ -0.21
PABPC1-208ENST00000519004 TOMM70O94826 608 aa13.72□□□□□ -0.21
PABPC1-208ENST00000519004 SPDYE6P0CI01 402 aa13.72□□□□□ -0.21
PABPC1-208ENST00000519004 ATP6V1B2P21281 511 aa13.72□□□□□ -0.21
PABPC1-208ENST00000519004 EEF1B2P24534 225 aaKnown RBP13.72□□□□□ -0.21
PABPC1-208ENST00000519004 ETV3P41162 512 aa13.72□□□□□ -0.21
PABPC1-208ENST00000519004 ILF2Q12905 390 aaKnown RBP13.72□□□□□ -0.21
PABPC1-208ENST00000519004 SLC12A1Q13621 1099 aa13.72□□□□□ -0.21
PABPC1-208ENST00000519004 C15orf59Q2T9L4 293 aaPredicted RBP13.72□□□□□ -0.21
PABPC1-208ENST00000519004 SPDYE2Q495Y8 402 aa13.72□□□□□ -0.21
PABPC1-208ENST00000519004 GPATCH4Q5T3I0 446 aaKnown RBP13.72□□□□□ -0.21
PABPC1-208ENST00000519004 SEL1L3Q68CR1 1132 aa13.72□□□□□ -0.21
PABPC1-208ENST00000519004 DCUN1D2Q6PH85 259 aa13.72□□□□□ -0.21
PABPC1-208ENST00000519004 GLRX5Q86SX6 157 aa13.72□□□□□ -0.21
PABPC1-208ENST00000519004 LINC00523Q86TU6 105 aa13.72□□□□□ -0.21
PABPC1-208ENST00000519004 PIGZQ86VD9 579 aa13.72□□□□□ -0.21
PABPC1-208ENST00000519004 TNS4Q8IZW8 715 aa13.72□□□□□ -0.21
PABPC1-208ENST00000519004 SFRP1Q8N474 314 aa13.72□□□□□ -0.21
PABPC1-208ENST00000519004 ARFGAP1Q8N6T3 406 aa13.72□□□□□ -0.21
PABPC1-208ENST00000519004 SLC4A11Q8NBS3 891 aa13.72□□□□□ -0.21
PABPC1-208ENST00000519004 DDX17Q92841 729 aaKnown RBP13.72□□□□□ -0.21
PABPC1-208ENST00000519004 EBNA1BP2Q99848 306 aaKnown RBP13.72□□□□□ -0.21
PABPC1-208ENST00000519004 MOCS1Q9NZB8 636 aa13.72□□□□□ -0.21
PABPC1-208ENST00000519004 SARDHQ9UL12 918 aa13.72□□□□□ -0.21
PABPC1-208ENST00000519004 SPEF1Q9Y4P9 236 aa13.72□□□□□ -0.21
PABPC1-208ENST00000519004 E2F8A0AVK6 867 aa13.72□□□□□ -0.21
PABPC1-208ENST00000519004 EI24O14681 340 aa13.72□□□□□ -0.21
PABPC1-208ENST00000519004 GPC4O75487 556 aa13.72□□□□□ -0.21
PABPC1-208ENST00000519004 GPD2P43304 727 aa13.72□□□□□ -0.21
PABPC1-208ENST00000519004 MAGEA3P43357 314 aa13.72□□□□□ -0.21
PABPC1-208ENST00000519004 BST2Q10589 180 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms