RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 CNPY2Q9Y2B0 182 aa6.21□□□□□ -1.42
SQLE-203ENST00000518931 AOX1Q06278 1338 aa6.21□□□□□ -1.42
SQLE-203ENST00000518931 IKBKBO14920 756 aa6.2□□□□□ -1.42
SQLE-203ENST00000518931 MLYCDO95822 493 aa6.2□□□□□ -1.42
SQLE-203ENST00000518931 HNRNPA1P09651 372 aaKnown RBP eCLIP6.2□□□□□ -1.42
SQLE-203ENST00000518931 HSPA5P11021 654 aaKnown RBP6.2□□□□□ -1.42
SQLE-203ENST00000518931 TCF7P36402 384 aaPredicted RBP6.2□□□□□ -1.42
SQLE-203ENST00000518931 ZNF41P51814 821 aaPredicted RBP6.2□□□□□ -1.42
SQLE-203ENST00000518931 CCDC15Q0P6D6 951 aa6.2□□□□□ -1.42
SQLE-203ENST00000518931 AIMP1Q12904 312 aaKnown RBP6.2□□□□□ -1.42
SQLE-203ENST00000518931 FHL3Q13643 280 aa6.2□□□□□ -1.42
SQLE-203ENST00000518931 RABL6Q3YEC7 729 aaPredicted RBP6.2□□□□□ -1.42
SQLE-203ENST00000518931 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.2□□□□□ -1.42
SQLE-203ENST00000518931 TOR1AIP1Q5JTV8 583 aa6.2□□□□□ -1.42
SQLE-203ENST00000518931 SLC9C2Q5TAH2 1124 aa6.2□□□□□ -1.42
SQLE-203ENST00000518931 SUMO4Q6EEV6 95 aa6.2□□□□□ -1.42
SQLE-203ENST00000518931 USP17L6PQ6QN14 398 aa6.2□□□□□ -1.42
SQLE-203ENST00000518931 KLHL24Q6TFL4 600 aa6.2□□□□□ -1.42
SQLE-203ENST00000518931 GBP6Q6ZN66 633 aa6.2□□□□□ -1.42
SQLE-203ENST00000518931 CCDC186Q7Z3E2 898 aa6.2□□□□□ -1.42
SQLE-203ENST00000518931 SZRD1Q7Z422 152 aa6.2□□□□□ -1.42
SQLE-203ENST00000518931 R3HCC1LQ7Z5L2 792 aaKnown RBP6.2□□□□□ -1.42
SQLE-203ENST00000518931 ADSSL1Q8N142 457 aa6.2□□□□□ -1.42
SQLE-203ENST00000518931 SRBD1Q8N5C6 995 aaKnown RBP6.2□□□□□ -1.42
SQLE-203ENST00000518931 TERB1Q8NA31 727 aa6.2□□□□□ -1.42
SQLE-203ENST00000518931 CYP2W1Q8TAV3 490 aa6.2□□□□□ -1.42
SQLE-203ENST00000518931 THAP4Q8WY91 577 aa6.2□□□□□ -1.42
SQLE-203ENST00000518931 WDYHV1Q96HA8 205 aa6.2□□□□□ -1.42
SQLE-203ENST00000518931 C1orf74Q96LT6 269 aa6.2□□□□□ -1.42
SQLE-203ENST00000518931 ZNF396Q96N95 335 aaPredicted RBP6.2□□□□□ -1.42
SQLE-203ENST00000518931 LZTS2Q9BRK4 669 aa6.2□□□□□ -1.42
SQLE-203ENST00000518931 CIPCQ9C0C6 399 aa6.2□□□□□ -1.42
SQLE-203ENST00000518931 THAP9Q9H5L6 903 aa6.2□□□□□ -1.42
SQLE-203ENST00000518931 ZNF304Q9HCX3 659 aa6.2□□□□□ -1.42
SQLE-203ENST00000518931 RRAGDQ9NQL2 400 aaPredicted RBP6.2□□□□□ -1.42
SQLE-203ENST00000518931 TFCP2L1Q9NZI6 479 aa6.2□□□□□ -1.42
SQLE-203ENST00000518931 CACNG4Q9UBN1 327 aa6.2□□□□□ -1.42
SQLE-203ENST00000518931 ZNF215Q9UL58 517 aaPredicted RBP6.2□□□□□ -1.42
SQLE-203ENST00000518931 CTAGE9A4FU28 777 aa6.19□□□□□ -1.42
SQLE-203ENST00000518931 HNRNPCL2B2RXH8 293 aa6.19□□□□□ -1.42
SQLE-203ENST00000518931 SMIM22K7EJ46 135 aa6.19□□□□□ -1.42
SQLE-203ENST00000518931 SPTLC2O15270 562 aa6.19□□□□□ -1.42
SQLE-203ENST00000518931 POLR3GO15318 223 aaPredicted RBP6.19□□□□□ -1.42
SQLE-203ENST00000518931 RIPK2O43353 540 aa6.19□□□□□ -1.42
SQLE-203ENST00000518931 CEP104O60308 925 aa6.19□□□□□ -1.42
SQLE-203ENST00000518931 CCNT2O60583 730 aaKnown RBP6.19□□□□□ -1.42
SQLE-203ENST00000518931 HNRNPCL1O60812 293 aaKnown RBP6.19□□□□□ -1.42
SQLE-203ENST00000518931 RTN2O75298 545 aa6.19□□□□□ -1.42
SQLE-203ENST00000518931 ITGA5P08648 1049 aa6.19□□□□□ -1.42
SQLE-203ENST00000518931 CSF1P09603 554 aa6.19□□□□□ -1.42
SQLE-203ENST00000518931 TSPY4P0CV99 314 aa6.19□□□□□ -1.42
SQLE-203ENST00000518931 TSPY10P0CW01 314 aa6.19□□□□□ -1.42
SQLE-203ENST00000518931 ARP10275 920 aa6.19□□□□□ -1.42
SQLE-203ENST00000518931 TBXAS1P24557 533 aaPredicted RBP6.19□□□□□ -1.42
SQLE-203ENST00000518931 CST5P28325 142 aaPredicted RBP6.19□□□□□ -1.42
SQLE-203ENST00000518931 RBL1P28749 1068 aa6.19□□□□□ -1.42
SQLE-203ENST00000518931 ACSL1P33121 698 aa6.19□□□□□ -1.42
SQLE-203ENST00000518931 GNL1P36915 607 aaPredicted RBP6.19□□□□□ -1.42
SQLE-203ENST00000518931 CCR5P51681 352 aa6.19□□□□□ -1.42
SQLE-203ENST00000518931 HTD2P86397 168 aa6.19□□□□□ -1.42
SQLE-203ENST00000518931 ACTN3Q08043 901 aaPredicted RBP6.19□□□□□ -1.42
SQLE-203ENST00000518931 TMEM119Q4V9L6 283 aa6.19□□□□□ -1.42
SQLE-203ENST00000518931 HSP90AA5PQ58FG0 334 aa6.19□□□□□ -1.42
SQLE-203ENST00000518931 TTC39AQ5SRH9 613 aa6.19□□□□□ -1.42
SQLE-203ENST00000518931 CCDC122Q5T0U0 273 aa6.19□□□□□ -1.42
SQLE-203ENST00000518931 MAP3K21Q5TCX8 1036 aa6.19□□□□□ -1.42
SQLE-203ENST00000518931 FCRLBQ6BAA4 426 aa6.19□□□□□ -1.42
SQLE-203ENST00000518931 SULT6B1Q6IMI4 303 aa6.19□□□□□ -1.42
SQLE-203ENST00000518931 NFRKBQ6P4R8 1299 aa6.19□□□□□ -1.42
SQLE-203ENST00000518931 FBXO38Q6PIJ6 1188 aa6.19□□□□□ -1.42
SQLE-203ENST00000518931 PET117Q6UWS5 81 aa6.19□□□□□ -1.42
SQLE-203ENST00000518931 TRIM72Q6ZMU5 477 aa6.19□□□□□ -1.42
SQLE-203ENST00000518931 ZNF788Q6ZQV5 615 aa6.19□□□□□ -1.42
SQLE-203ENST00000518931 BBS12Q6ZW61 710 aa6.19□□□□□ -1.42
SQLE-203ENST00000518931 PIWIL3Q7Z3Z3 882 aaKnown RBP6.19□□□□□ -1.42
SQLE-203ENST00000518931 METTL23Q86XA0 190 aa6.19□□□□□ -1.42
SQLE-203ENST00000518931 SFTPA1Q8IWL2 248 aa6.19□□□□□ -1.42
SQLE-203ENST00000518931 CCDC28AQ8IWP9 274 aa6.19□□□□□ -1.42
SQLE-203ENST00000518931 AFAP1Q8N556 730 aa6.19□□□□□ -1.42
SQLE-203ENST00000518931 DPP10Q8N608 796 aa6.19□□□□□ -1.42
SQLE-203ENST00000518931 RASSF8Q8NHQ8 419 aa6.19□□□□□ -1.42
SQLE-203ENST00000518931 MBD3L2Q8NHZ7 208 aaPredicted RBP6.19□□□□□ -1.42
SQLE-203ENST00000518931 SUN3Q8TAQ9 357 aa6.19□□□□□ -1.42
SQLE-203ENST00000518931 NEK9Q8TD19 979 aa6.19□□□□□ -1.42
SQLE-203ENST00000518931 ABHD5Q8WTS1 349 aa6.19□□□□□ -1.42
SQLE-203ENST00000518931 AFG1LQ8WV93 481 aa6.19□□□□□ -1.42
SQLE-203ENST00000518931 CUL5Q93034 780 aa6.19□□□□□ -1.42
SQLE-203ENST00000518931 RILPL2Q969X0 211 aa6.19□□□□□ -1.42
SQLE-203ENST00000518931 EID2BQ96D98 161 aa6.19□□□□□ -1.42
SQLE-203ENST00000518931 C18orf8Q96DM3 657 aa6.19□□□□□ -1.42
SQLE-203ENST00000518931 DAZAP1Q96EP5 407 aaKnown RBP6.19□□□□□ -1.42
SQLE-203ENST00000518931 FAM81BQ96LP2 452 aa6.19□□□□□ -1.42
SQLE-203ENST00000518931 AK8Q96MA6 479 aa6.19□□□□□ -1.42
SQLE-203ENST00000518931 TCP11L1Q9NUJ3 509 aa6.19□□□□□ -1.42
SQLE-203ENST00000518931 RGL1Q9NZL6 768 aa6.19□□□□□ -1.42
SQLE-203ENST00000518931 ACTR3BQ9P1U1 418 aa6.19□□□□□ -1.42
SQLE-203ENST00000518931 SERGEFQ9UGK8 458 aa6.19□□□□□ -1.42
SQLE-203ENST00000518931 IL16Q14005 1332 aa6.19□□□□□ -1.42
SQLE-203ENST00000518931 COL15A1P39059 1388 aa6.18□□□□□ -1.42
SQLE-203ENST00000518931 GPR75-ASB3A0A0A6YYF3 556 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms