RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 PRSS45Q7RTY3 260 aa3.94□□□□□ -1.78
VPS13B-207ENST00000518569 TRIM74Q86UV6 250 aa3.94□□□□□ -1.78
VPS13B-207ENST00000518569 TRIM73Q86UV7 250 aa3.94□□□□□ -1.78
VPS13B-207ENST00000518569 TICAM2Q86XR7 235 aa3.94□□□□□ -1.78
VPS13B-207ENST00000518569 GPSM1Q86YR5 675 aa3.94□□□□□ -1.78
VPS13B-207ENST00000518569 FAM217AQ8IXS0 508 aa3.94□□□□□ -1.78
VPS13B-207ENST00000518569 NRACQ8N912 160 aa3.94□□□□□ -1.78
VPS13B-207ENST00000518569 DNAAF1Q8NEP3 725 aa3.94□□□□□ -1.78
VPS13B-207ENST00000518569 OR4N2Q8NGD1 307 aa3.94□□□□□ -1.78
VPS13B-207ENST00000518569 RUFY2Q8WXA3 655 aa3.94□□□□□ -1.78
VPS13B-207ENST00000518569 LPAR1Q92633 364 aa3.94□□□□□ -1.78
VPS13B-207ENST00000518569 APOPT1Q96IL0 206 aa3.94□□□□□ -1.78
VPS13B-207ENST00000518569 NLRP4Q96MN2 994 aa3.94□□□□□ -1.78
VPS13B-207ENST00000518569 SEC62Q99442 399 aaKnown RBP3.94□□□□□ -1.78
VPS13B-207ENST00000518569 EYA3Q99504 573 aa3.94□□□□□ -1.78
VPS13B-207ENST00000518569 FOXP1Q9H334 677 aaPredicted RBP3.94□□□□□ -1.78
VPS13B-207ENST00000518569 KLHL31Q9H511 634 aa3.94□□□□□ -1.78
VPS13B-207ENST00000518569 CXorf56Q9H5V9 222 aa3.94□□□□□ -1.78
VPS13B-207ENST00000518569 ZBTB40Q9NUA8 1239 aa3.94□□□□□ -1.78
VPS13B-207ENST00000518569 CDH22Q9UJ99 828 aa3.94□□□□□ -1.78
VPS13B-207ENST00000518569 RAP2CQ9Y3L5 183 aa3.94□□□□□ -1.78
VPS13B-207ENST00000518569 CYP46A1Q9Y6A2 500 aa3.94□□□□□ -1.78
VPS13B-207ENST00000518569 SETD1BQ9UPS6 1966 aaKnown RBP3.94□□□□□ -1.78
VPS13B-207ENST00000518569 ZNF521Q96K83 1311 aa3.94□□□□□ -1.78
VPS13B-207ENST00000518569 A0A096LPK6 155 aa3.93□□□□□ -1.78
VPS13B-207ENST00000518569 ARHGAP10A1A4S6 786 aa3.93□□□□□ -1.78
VPS13B-207ENST00000518569 A6NLC8 198 aa3.93□□□□□ -1.78
VPS13B-207ENST00000518569 HSPB6O14558 160 aa3.93□□□□□ -1.78
VPS13B-207ENST00000518569 MMP3P08254 477 aa3.93□□□□□ -1.78
VPS13B-207ENST00000518569 ARL1P40616 181 aaPredicted RBP3.93□□□□□ -1.78
VPS13B-207ENST00000518569 POLD2P49005 469 aa3.93□□□□□ -1.78
VPS13B-207ENST00000518569 CENPAP49450 140 aa3.93□□□□□ -1.78
VPS13B-207ENST00000518569 ARSFP54793 590 aa3.93□□□□□ -1.78
VPS13B-207ENST00000518569 RPP30P78346 268 aaKnown RBP3.93□□□□□ -1.78
VPS13B-207ENST00000518569 PRICKLE4Q2TBC4 344 aa3.93□□□□□ -1.78
VPS13B-207ENST00000518569 FBXO43Q4G163 708 aa3.93□□□□□ -1.78
VPS13B-207ENST00000518569 MON1AQ86VX9 555 aa3.93□□□□□ -1.78
VPS13B-207ENST00000518569 LRRC57Q8N9N7 239 aa3.93□□□□□ -1.78
VPS13B-207ENST00000518569 TMEM163Q8TC26 289 aa3.93□□□□□ -1.78
VPS13B-207ENST00000518569 ST8SIA4Q92187 359 aa3.93□□□□□ -1.78
VPS13B-207ENST00000518569 ZBTB10Q96DT7 871 aa3.93□□□□□ -1.78
VPS13B-207ENST00000518569 RNF125Q96EQ8 232 aa3.93□□□□□ -1.78
VPS13B-207ENST00000518569 FCRL4Q96PJ5 515 aa3.93□□□□□ -1.78
VPS13B-207ENST00000518569 WDR77Q9BQA1 342 aaPredicted RBP3.93□□□□□ -1.78
VPS13B-207ENST00000518569 UNC45AQ9H3U1 944 aa3.93□□□□□ -1.78
VPS13B-207ENST00000518569 RNF7Q9UBF6 113 aa3.93□□□□□ -1.78
VPS13B-207ENST00000518569 HMGB1P1B2RPK0 211 aaPredicted RBP3.92□□□□□ -1.78
VPS13B-207ENST00000518569 STMND1H3BQB6 276 aa3.92□□□□□ -1.78
VPS13B-207ENST00000518569 TSPAN4O14817 238 aa3.92□□□□□ -1.78
VPS13B-207ENST00000518569 CEP104O60308 925 aa3.92□□□□□ -1.78
VPS13B-207ENST00000518569 SYF2O95926 243 aaKnown RBP3.92□□□□□ -1.78
VPS13B-207ENST00000518569 PSG1P11464 419 aa3.92□□□□□ -1.78
VPS13B-207ENST00000518569 CHRNB2P17787 502 aa3.92□□□□□ -1.78
VPS13B-207ENST00000518569 PAX3P23760 479 aa3.92□□□□□ -1.78
VPS13B-207ENST00000518569 RFC1P35251 1148 aaPredicted RBP3.92□□□□□ -1.78
VPS13B-207ENST00000518569 DDIT3P35638 169 aa3.92□□□□□ -1.78
VPS13B-207ENST00000518569 LIFRP42702 1097 aa3.92□□□□□ -1.78
VPS13B-207ENST00000518569 YWHAZP63104 245 aaKnown RBP3.92□□□□□ -1.78
VPS13B-207ENST00000518569 GALNT2Q10471 571 aa3.92□□□□□ -1.78
VPS13B-207ENST00000518569 PTGR1Q14914 329 aa3.92□□□□□ -1.78
VPS13B-207ENST00000518569 ME3Q16798 604 aa3.92□□□□□ -1.78
VPS13B-207ENST00000518569 DUSP6Q16828 381 aa3.92□□□□□ -1.78
VPS13B-207ENST00000518569 EDRF1Q3B7T1 1238 aa3.92□□□□□ -1.78
VPS13B-207ENST00000518569 LEXMQ3ZCV2 418 aa3.92□□□□□ -1.78
VPS13B-207ENST00000518569 SLC9C2Q5TAH2 1124 aa3.92□□□□□ -1.78
VPS13B-207ENST00000518569 HEPHL1Q6MZM0 1159 aa3.92□□□□□ -1.78
VPS13B-207ENST00000518569 INO80CQ6PI98 192 aaPredicted RBP3.92□□□□□ -1.78
VPS13B-207ENST00000518569 FAM83HQ6ZRV2 1179 aaPredicted RBP3.92□□□□□ -1.78
VPS13B-207ENST00000518569 COLCA1Q6ZS62 124 aa3.92□□□□□ -1.78
VPS13B-207ENST00000518569 SLC16A12Q6ZSM3 486 aa3.92□□□□□ -1.78
VPS13B-207ENST00000518569 IRF2BP2Q7Z5L9 587 aa3.92□□□□□ -1.78
VPS13B-207ENST00000518569 PAF1Q8N7H5 531 aa3.92□□□□□ -1.78
VPS13B-207ENST00000518569 C11orf65Q8NCR3 313 aa3.92□□□□□ -1.78
VPS13B-207ENST00000518569 MCPH1Q8NEM0 835 aa3.92□□□□□ -1.78
VPS13B-207ENST00000518569 ENGASEQ8NFI3 743 aa3.92□□□□□ -1.78
VPS13B-207ENST00000518569 GABPB2Q8TAK5 448 aaPredicted RBP3.92□□□□□ -1.78
VPS13B-207ENST00000518569 INPP5DQ92835 1189 aa3.92□□□□□ -1.78
VPS13B-207ENST00000518569 SLC25A28Q96A46 364 aa3.92□□□□□ -1.78
VPS13B-207ENST00000518569 ZNF48Q96MX3 618 aaPredicted RBP3.92□□□□□ -1.78
VPS13B-207ENST00000518569 NAP1L4Q99733 375 aaKnown RBP3.92□□□□□ -1.78
VPS13B-207ENST00000518569 EIF2AK1Q9BQI3 630 aaKnown RBP3.92□□□□□ -1.78
VPS13B-207ENST00000518569 AGXT2Q9BYV1 514 aa3.92□□□□□ -1.78
VPS13B-207ENST00000518569 PAIP1Q9H074 479 aaKnown RBP3.92□□□□□ -1.78
VPS13B-207ENST00000518569 ISCUQ9H1K1 167 aa3.92□□□□□ -1.78
VPS13B-207ENST00000518569 PREBQ9HCU5 417 aa3.92□□□□□ -1.78
VPS13B-207ENST00000518569 IL1RAPL1Q9NZN1 696 aa3.92□□□□□ -1.78
VPS13B-207ENST00000518569 PABPN1LA6NDY0 278 aaKnown RBP3.91□□□□□ -1.78
VPS13B-207ENST00000518569 DDTLA6NHG4 134 aaPredicted RBP3.91□□□□□ -1.78
VPS13B-207ENST00000518569 EBAG9O00559 213 aa3.91□□□□□ -1.78
VPS13B-207ENST00000518569 TNPO2O14787 897 aaKnown RBP3.91□□□□□ -1.78
VPS13B-207ENST00000518569 SPTLC2O15270 562 aa3.91□□□□□ -1.78
VPS13B-207ENST00000518569 F9P00740 461 aa3.91□□□□□ -1.78
VPS13B-207ENST00000518569 URODP06132 367 aa3.91□□□□□ -1.78
VPS13B-207ENST00000518569 COX7A2P14406 83 aa3.91□□□□□ -1.78
VPS13B-207ENST00000518569 PTPN2P17706 415 aa3.91□□□□□ -1.78
VPS13B-207ENST00000518569 CD72P21854 359 aa3.91□□□□□ -1.78
VPS13B-207ENST00000518569 AVPR1AP37288 418 aa3.91□□□□□ -1.78
VPS13B-207ENST00000518569 NR1H2P55055 460 aa3.91□□□□□ -1.78
VPS13B-207ENST00000518569 EFNB1P98172 346 aa3.91□□□□□ -1.78
VPS13B-207ENST00000518569 CYP4A11Q02928 519 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms