RNA–Protein interactions for RNA: ENST00000517766.5

CD47-205, Transcript of CD47 molecule, humanhuman

TSL 2

Gene CD47, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-205ENST00000517766 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.01□□□□□ -1.45
CD47-205ENST00000517766 NUP93Q8N1F7 819 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 LRRC43Q8N309 656 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 FBXO36Q8NEA4 188 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 BAHD1Q8TBE0 780 aaPredicted RBP6.01□□□□□ -1.45
CD47-205ENST00000517766 SPPL2BQ8TCT7 592 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 BCAS4Q8TDM0 211 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 SH3TC2Q8TF17 1288 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 WFDC12Q8WWY7 111 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 HTR3CQ8WXA8 447 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 ARHGEF2Q92974 986 aaKnown RBP6.01□□□□□ -1.45
CD47-205ENST00000517766 CEP295NLQ96MC4 621 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 PWWP2AQ96N64 755 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 TOX2Q96NM4 488 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 SERPINB11Q96P15 392 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 CASD1Q96PB1 797 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 DEFB118Q96PH6 123 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 DEPDC7Q96QD5 511 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 HAPLN3Q96S86 360 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 TMEM209Q96SK2 561 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 SELENOSQ9BQE4 189 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 C10orf88Q9H8K7 445 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 VPS37BQ9H9H4 285 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 LRRC4CQ9HCJ2 640 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 PIGVQ9NUD9 493 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 ARHGEF38Q9NXL2 777 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 DTLQ9NZJ0 730 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 COX16Q9P0S2 106 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 CALCOCO1Q9P1Z2 691 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 ADAM30Q9UKF2 790 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 SCML2Q9UQR0 700 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 PRG3Q9Y2Y8 225 aaPredicted RBP6.01□□□□□ -1.45
CD47-205ENST00000517766 MIA3Q5JRA6 1907 aa6.01□□□□□ -1.45
CD47-205ENST00000517766 CLUHO75153 1309 aa6□□□□□ -1.45
CD47-205ENST00000517766 TCRBV7S3A2A0A539 114 aa6□□□□□ -1.45
CD47-205ENST00000517766 GMNCA6NCL1 334 aa6□□□□□ -1.45
CD47-205ENST00000517766 GOLGA8MH3BSY2 632 aa6□□□□□ -1.45
CD47-205ENST00000517766 TRDMT1O14717 391 aaKnown RBP6□□□□□ -1.45
CD47-205ENST00000517766 FGF10O15520 208 aaPredicted RBP6□□□□□ -1.45
CD47-205ENST00000517766 IRAK2O43187 625 aa6□□□□□ -1.45
CD47-205ENST00000517766 PSMD3O43242 534 aa6□□□□□ -1.45
CD47-205ENST00000517766 MFSD11O43934 449 aa6□□□□□ -1.45
CD47-205ENST00000517766 OPHN1O60890 802 aa6□□□□□ -1.45
CD47-205ENST00000517766 RTN3O95197 1032 aaPredicted RBP6□□□□□ -1.45
CD47-205ENST00000517766 TP53P04637 393 aaPredicted RBP6□□□□□ -1.45
CD47-205ENST00000517766 SLC2A3P11169 496 aa6□□□□□ -1.45
CD47-205ENST00000517766 MLNP12872 115 aa6□□□□□ -1.45
CD47-205ENST00000517766 CCL5P13501 91 aa6□□□□□ -1.45
CD47-205ENST00000517766 CHN1P15882 459 aa6□□□□□ -1.45
CD47-205ENST00000517766 ERCC2P18074 760 aa6□□□□□ -1.45
CD47-205ENST00000517766 CCR1P32246 355 aa6□□□□□ -1.45
CD47-205ENST00000517766 STX2P32856 288 aa6□□□□□ -1.45
CD47-205ENST00000517766 RFC2P35250 354 aa6□□□□□ -1.45
CD47-205ENST00000517766 SLCO1A2P46721 670 aa6□□□□□ -1.45
CD47-205ENST00000517766 SLC18A1P54219 525 aa6□□□□□ -1.45
CD47-205ENST00000517766 GEMIN4P57678 1058 aaKnown RBP6□□□□□ -1.45
CD47-205ENST00000517766 PITX1P78337 314 aaPredicted RBP6□□□□□ -1.45
CD47-205ENST00000517766 IFI35P80217 286 aaPredicted RBP6□□□□□ -1.45
CD47-205ENST00000517766 NRG1Q02297 640 aaPredicted RBP6□□□□□ -1.45
CD47-205ENST00000517766 AP1B1Q10567 949 aa6□□□□□ -1.45
CD47-205ENST00000517766 SLC10A2Q12908 348 aaPredicted RBP6□□□□□ -1.45
CD47-205ENST00000517766 GPR17Q13304 367 aa6□□□□□ -1.45
CD47-205ENST00000517766 EIF4EBP2Q13542 120 aaPredicted RBP6□□□□□ -1.45
CD47-205ENST00000517766 SEMA5AQ13591 1074 aa6□□□□□ -1.45
CD47-205ENST00000517766 PPP2R5DQ14738 602 aa6□□□□□ -1.45
CD47-205ENST00000517766 GPNMBQ14956 572 aa6□□□□□ -1.45
CD47-205ENST00000517766 PRKD1Q15139 912 aaPredicted RBP6□□□□□ -1.45
CD47-205ENST00000517766 FXNQ16595 210 aa6□□□□□ -1.45
CD47-205ENST00000517766 PARP6Q2NL67 630 aa6□□□□□ -1.45
CD47-205ENST00000517766 BBS9Q3SYG4 887 aa6□□□□□ -1.45
CD47-205ENST00000517766 CTXN3Q4LDR2 81 aa6□□□□□ -1.45
CD47-205ENST00000517766 ANKRD20A2Q5SQ80 823 aa6□□□□□ -1.45
CD47-205ENST00000517766 FNBP1LQ5T0N5 605 aa6□□□□□ -1.45
CD47-205ENST00000517766 ANKRD20A1Q5TYW2 823 aa6□□□□□ -1.45
CD47-205ENST00000517766 FAM171A1Q5VUB5 890 aa6□□□□□ -1.45
CD47-205ENST00000517766 ANKRD20A3Q5VUR7 823 aa6□□□□□ -1.45
CD47-205ENST00000517766 ANKRD34AQ69YU3 496 aa6□□□□□ -1.45
CD47-205ENST00000517766 MSANTD2Q6P1R3 559 aa6□□□□□ -1.45
CD47-205ENST00000517766 SLC39A5Q6ZMH5 540 aa6□□□□□ -1.45
CD47-205ENST00000517766 C3orf62Q6ZUJ4 267 aa6□□□□□ -1.45
CD47-205ENST00000517766 B4GALNT4Q76KP1 1039 aa6□□□□□ -1.45
CD47-205ENST00000517766 MON1AQ86VX9 555 aa6□□□□□ -1.45
CD47-205ENST00000517766 JAZF1Q86VZ6 243 aa6□□□□□ -1.45
CD47-205ENST00000517766 NLRP14Q86W24 1093 aa6□□□□□ -1.45
CD47-205ENST00000517766 SCN4BQ8IWT1 228 aa6□□□□□ -1.45
CD47-205ENST00000517766 CCDC13Q8IYE1 715 aa6□□□□□ -1.45
CD47-205ENST00000517766 PYROXD2Q8N2H3 581 aa6□□□□□ -1.45
CD47-205ENST00000517766 LZTR1Q8N653 840 aa6□□□□□ -1.45
CD47-205ENST00000517766 DQX1Q8TE96 717 aaKnown RBP6□□□□□ -1.45
CD47-205ENST00000517766 HDAC11Q96DB2 347 aa6□□□□□ -1.45
CD47-205ENST00000517766 SPATA13Q96N96 652 aa6□□□□□ -1.45
CD47-205ENST00000517766 XPO6Q96QU8 1125 aaKnown RBP6□□□□□ -1.45
CD47-205ENST00000517766 VAT1Q99536 393 aa6□□□□□ -1.45
CD47-205ENST00000517766 TKTL2Q9H0I9 626 aa6□□□□□ -1.45
CD47-205ENST00000517766 SMOC2Q9H3U7 446 aa6□□□□□ -1.45
CD47-205ENST00000517766 HIPK3Q9H422 1215 aa6□□□□□ -1.45
CD47-205ENST00000517766 CCDC134Q9H6E4 229 aa6□□□□□ -1.45
CD47-205ENST00000517766 ACSS3Q9H6R3 686 aa6□□□□□ -1.45
CD47-205ENST00000517766 CATSPERBQ9H7T0 1116 aa6□□□□□ -1.45
CD47-205ENST00000517766 XAB2Q9HCS7 855 aaKnown RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms