RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 UCMAQ8WVF2 138 aa10.05□□□□□ -0.8
CLN8-202ENST00000517514 ZNF592Q92610 1267 aa10.05□□□□□ -0.8
CLN8-202ENST00000517514 EXOC4Q96A65 974 aa10.05□□□□□ -0.8
CLN8-202ENST00000517514 ISG20Q96AZ6 181 aaKnown RBP10.05□□□□□ -0.8
CLN8-202ENST00000517514 RTP4Q96DX8 246 aa10.05□□□□□ -0.8
CLN8-202ENST00000517514 EXOC2Q96KP1 924 aa10.05□□□□□ -0.8
CLN8-202ENST00000517514 PSKH2Q96QS6 385 aa10.05□□□□□ -0.8
CLN8-202ENST00000517514 FAM129BQ96TA1 746 aa10.05□□□□□ -0.8
CLN8-202ENST00000517514 TMEM121Q9BTD3 319 aa10.05□□□□□ -0.8
CLN8-202ENST00000517514 CEP44Q9C0F1 390 aa10.05□□□□□ -0.8
CLN8-202ENST00000517514 BRD8Q9H0E9 1235 aa10.05□□□□□ -0.8
CLN8-202ENST00000517514 SP110Q9HB58 689 aa10.05□□□□□ -0.8
CLN8-202ENST00000517514 CDC23Q9UJX2 597 aa10.05□□□□□ -0.8
CLN8-202ENST00000517514 HPCAL4Q9UM19 191 aa10.05□□□□□ -0.8
CLN8-202ENST00000517514 PLA2G4CQ9UP65 541 aa10.05□□□□□ -0.8
CLN8-202ENST00000517514 DRG1Q9Y295 367 aaKnown RBP10.05□□□□□ -0.8
CLN8-202ENST00000517514 ATP8A1Q9Y2Q0 1164 aa10.05□□□□□ -0.8
CLN8-202ENST00000517514 NEU2Q9Y3R4 380 aa10.05□□□□□ -0.8
CLN8-202ENST00000517514 MRFAP1Q9Y605 127 aa10.05□□□□□ -0.8
CLN8-202ENST00000517514 MYLKQ15746 1914 aa10.04□□□□□ -0.8
CLN8-202ENST00000517514 PLXND1Q9Y4D7 1925 aa10.04□□□□□ -0.8
CLN8-202ENST00000517514 FAM86C2PA6NEL3 165 aa10.04□□□□□ -0.8
CLN8-202ENST00000517514 STK25O00506 426 aa10.04□□□□□ -0.8
CLN8-202ENST00000517514 MCF2LO15068 1137 aa10.04□□□□□ -0.8
CLN8-202ENST00000517514 NPC1O15118 1278 aa10.04□□□□□ -0.8
CLN8-202ENST00000517514 ZBTB24O43167 697 aaPredicted RBP10.04□□□□□ -0.8
CLN8-202ENST00000517514 URI1O94763 535 aaPredicted RBP10.04□□□□□ -0.8
CLN8-202ENST00000517514 GSRP00390 522 aa10.04□□□□□ -0.8
CLN8-202ENST00000517514 ETS1P14921 441 aa10.04□□□□□ -0.8
CLN8-202ENST00000517514 GKP32189 559 aa10.04□□□□□ -0.8
CLN8-202ENST00000517514 MMP13P45452 471 aa10.04□□□□□ -0.8
CLN8-202ENST00000517514 CLCN5P51795 746 aa10.04□□□□□ -0.8
CLN8-202ENST00000517514 METAP1P53582 386 aa10.04□□□□□ -0.8
CLN8-202ENST00000517514 MAXP61244 160 aa10.04□□□□□ -0.8
CLN8-202ENST00000517514 SATB1Q01826 763 aa10.04□□□□□ -0.8
CLN8-202ENST00000517514 BYSLQ13895 437 aaKnown RBP10.04□□□□□ -0.8
CLN8-202ENST00000517514 RFTN1Q14699 578 aaPredicted RBP10.04□□□□□ -0.8
CLN8-202ENST00000517514 TEX44Q53QW1 395 aa10.04□□□□□ -0.8
CLN8-202ENST00000517514 ALG1LQ6GMV1 187 aa10.04□□□□□ -0.8
CLN8-202ENST00000517514 TIGD7Q6NT04 549 aaPredicted RBP10.04□□□□□ -0.8
CLN8-202ENST00000517514 DARS2Q6PI48 645 aaKnown RBP10.04□□□□□ -0.8
CLN8-202ENST00000517514 SERPINA13PQ6UXR4 307 aa10.04□□□□□ -0.8
CLN8-202ENST00000517514 DPY19L3Q6ZPD9 716 aa10.04□□□□□ -0.8
CLN8-202ENST00000517514 NUDT18Q6ZVK8 323 aa10.04□□□□□ -0.8
CLN8-202ENST00000517514 CDKL3Q8IVW4 592 aaPredicted RBP10.04□□□□□ -0.8
CLN8-202ENST00000517514 PLPP6Q8IY26 295 aa10.04□□□□□ -0.8
CLN8-202ENST00000517514 CHPFQ8IZ52 775 aa10.04□□□□□ -0.8
CLN8-202ENST00000517514 MAML2Q8IZL2 1156 aaPredicted RBP10.04□□□□□ -0.8
CLN8-202ENST00000517514 STK40Q8N2I9 435 aa10.04□□□□□ -0.8
CLN8-202ENST00000517514 PCDH20Q8N6Y1 951 aaKnown RBP10.04□□□□□ -0.8
CLN8-202ENST00000517514 FAM71DQ8N9W8 422 aa10.04□□□□□ -0.8
CLN8-202ENST00000517514 OR6K2Q8NGY2 324 aa10.04□□□□□ -0.8
CLN8-202ENST00000517514 ARRDC2Q8TBH0 407 aa10.04□□□□□ -0.8
CLN8-202ENST00000517514 HTR3CQ8WXA8 447 aa10.04□□□□□ -0.8
CLN8-202ENST00000517514 CASKIN2Q8WXE0 1202 aa10.04□□□□□ -0.8
CLN8-202ENST00000517514 TADA1Q96BN2 335 aa10.04□□□□□ -0.8
CLN8-202ENST00000517514 TEKT5Q96M29 485 aa10.04□□□□□ -0.8
CLN8-202ENST00000517514 MGME1Q9BQP7 344 aa10.04□□□□□ -0.8
CLN8-202ENST00000517514 FRMD8P1Q9BZ68 369 aaPredicted RBP10.04□□□□□ -0.8
CLN8-202ENST00000517514 TM6SF2Q9BZW4 377 aa10.04□□□□□ -0.8
CLN8-202ENST00000517514 SLC6A17Q9H1V8 727 aa10.04□□□□□ -0.8
CLN8-202ENST00000517514 NT5MQ9NPB1 228 aa10.04□□□□□ -0.8
CLN8-202ENST00000517514 RBM22Q9NW64 420 aaKnown RBP eCLIP10.04□□□□□ -0.8
CLN8-202ENST00000517514 SARDHQ9UL12 918 aa10.04□□□□□ -0.8
CLN8-202ENST00000517514 WASF2Q9Y6W5 498 aa10.04□□□□□ -0.8
CLN8-202ENST00000517514 ZDBF2Q9HCK1 2354 aa10.04□□□□□ -0.8
CLN8-202ENST00000517514 LRRK1Q38SD2 2015 aa10.04□□□□□ -0.8
CLN8-202ENST00000517514 ZNF318Q5VUA4 2279 aa10.03□□□□□ -0.8
CLN8-202ENST00000517514 EDDM13A0A1B0GTR0 161 aa10.03□□□□□ -0.8
CLN8-202ENST00000517514 TARSL2A2RTX5 802 aaKnown RBP10.03□□□□□ -0.8
CLN8-202ENST00000517514 C5orf60A6NFR6 353 aa10.03□□□□□ -0.8
CLN8-202ENST00000517514 K7ESF4 209 aa10.03□□□□□ -0.8
CLN8-202ENST00000517514 KRIT1O00522 736 aa10.03□□□□□ -0.8
CLN8-202ENST00000517514 KCNN4O15554 427 aa10.03□□□□□ -0.8
CLN8-202ENST00000517514 PHF2O75151 1096 aa10.03□□□□□ -0.8
CLN8-202ENST00000517514 ITGAVP06756 1048 aa10.03□□□□□ -0.8
CLN8-202ENST00000517514 EPHX1P07099 455 aa10.03□□□□□ -0.8
CLN8-202ENST00000517514 ZSCAN5DPP0CG00 497 aa10.03□□□□□ -0.8
CLN8-202ENST00000517514 TDGF1P13385 188 aa10.03□□□□□ -0.8
CLN8-202ENST00000517514 HOXB2P14652 356 aa10.03□□□□□ -0.8
CLN8-202ENST00000517514 COILP38432 576 aaPredicted RBP10.03□□□□□ -0.8
CLN8-202ENST00000517514 PTGIRP43119 386 aa10.03□□□□□ -0.8
CLN8-202ENST00000517514 RENBPP51606 427 aa10.03□□□□□ -0.8
CLN8-202ENST00000517514 CCNHP51946 323 aaPredicted RBP10.03□□□□□ -0.8
CLN8-202ENST00000517514 GEMIN4P57678 1058 aaKnown RBP10.03□□□□□ -0.8
CLN8-202ENST00000517514 ST8SIA6P61647 398 aa10.03□□□□□ -0.8
CLN8-202ENST00000517514 DSC2Q02487 901 aa10.03□□□□□ -0.8
CLN8-202ENST00000517514 NSUN2Q08J23 767 aaKnown RBP eCLIP10.03□□□□□ -0.8
CLN8-202ENST00000517514 CRY1Q16526 586 aa10.03□□□□□ -0.8
CLN8-202ENST00000517514 ACCSLQ4AC99 568 aa10.03□□□□□ -0.8
CLN8-202ENST00000517514 HSF5Q4G112 596 aaPredicted RBP10.03□□□□□ -0.8
CLN8-202ENST00000517514 CARD16Q5EG05 197 aa10.03□□□□□ -0.8
CLN8-202ENST00000517514 MARC1Q5VT66 337 aa10.03□□□□□ -0.8
CLN8-202ENST00000517514 NCEH1Q6PIU2 408 aa10.03□□□□□ -0.8
CLN8-202ENST00000517514 MAMSTRQ6ZN01 415 aa10.03□□□□□ -0.8
CLN8-202ENST00000517514 SYT13Q7L8C5 426 aa10.03□□□□□ -0.8
CLN8-202ENST00000517514 PRPF39Q86UA1 669 aaKnown RBP10.03□□□□□ -0.8
CLN8-202ENST00000517514 KLHDC8BQ8IXV7 354 aa10.03□□□□□ -0.8
CLN8-202ENST00000517514 SPEM1Q8N4L4 309 aa10.03□□□□□ -0.8
CLN8-202ENST00000517514 LRRN4CLQ8ND94 238 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms