RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 NOS3P29474 1203 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 FMO4P31512 558 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 SOAT1P35610 550 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 CRKLP46109 303 aaKnown RBP4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 ASMTP46597 345 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 KCNJ1P48048 391 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 KHKP50053 298 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 GNAQP50148 359 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 KCNQ1P51787 676 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 ZNF134P52741 427 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 MVDP53602 400 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 ADARP55265 1226 aaKnown RBP4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 ERVFC1P60507 584 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 ASIC1P78348 528 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 PRR5P85299 388 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 BEX3Q00994 111 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 PRKCEQ02156 737 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 CDK18Q07002 472 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 KIF5AQ12840 1032 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 RIPK1Q13546 671 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 CUL2Q13617 745 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 UBXN2BQ14CS0 331 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 RAB3GAP1Q15042 981 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 RRS1Q15050 365 aaKnown RBP4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 TRADDQ15628 312 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 TAZQ16635 292 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 ASTE1Q2TB18 679 aaPredicted RBP4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 TWISTNBQ3B726 338 aaPredicted RBP4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 SFMBT2Q5VUG0 894 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 TMEM200BQ69YZ2 307 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 SLC9A4Q6AI14 798 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 JADE1Q6IE81 842 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 NAPEPLDQ6IQ20 393 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 PAQR3Q6TCH7 311 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 INTS8Q75QN2 995 aaKnown RBP4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 CEP57Q86XR8 500 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 CLEC10AQ8IUN9 316 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 UNC5CLQ8IV45 518 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 TMEFF1Q8IYR6 380 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 MMP21Q8N119 569 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 ANKS4BQ8N8V4 417 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 KDM1BQ8NB78 822 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 NSUN7Q8NE18 718 aaKnown RBP4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 LPCAT1Q8NF37 534 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 KIAA1524Q8TCG1 905 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 NEK9Q8TD19 979 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 NSMCE1Q8WV22 266 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 ANKRD49Q8WVL7 239 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 PSPC1Q8WXF1 523 aaKnown RBP4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 RAB40AQ8WXH6 277 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 RAB7BQ96AH8 199 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 MMABQ96EY8 250 aaPredicted RBP4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 MISP3Q96FF7 219 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 ELMOD3Q96FG2 381 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 FBXL20Q96IG2 436 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 FAR2Q96K12 515 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 TCEANC2Q96MN5 208 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 SPATA13Q96N96 652 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 ZNF558Q96NG5 402 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 CAMK1GQ96NX5 476 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 HAPLN3Q96S86 360 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 FAM83CQ9BQN1 747 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 ERP44Q9BS26 406 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 POLR3CQ9BUI4 534 aaPredicted RBP4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 ZNF341Q9BYN7 854 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 PLK3Q9H4B4 646 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 RPAP3Q9H6T3 665 aaPredicted RBP4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 CXorf36Q9H7Y0 433 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 TM9SF3Q9HD45 589 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 PALMDQ9NP74 551 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 CD93Q9NPY3 652 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 ATAD3AQ9NVI7 634 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 DDX18Q9NVP1 670 aaKnown RBP4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 HAO2Q9NYQ3 351 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 GDE1Q9NZC3 331 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 C6orf203Q9P0P8 240 aaPredicted RBP4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 SLAMF8Q9P0V8 285 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 HMG20BQ9P0W2 317 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 DLGAP2Q9P1A6 1054 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 TRPC4Q9UBN4 977 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 SPASTQ9UBP0 616 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 KLQ9UEF7 1012 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 CNOT8Q9UFF9 292 aaKnown RBP4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 HAO1Q9UJM8 370 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 LEF1Q9UJU2 399 aaPredicted RBP4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 STX8Q9UNK0 236 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 TDRKHQ9Y2W6 561 aaKnown RBP4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 STRAPQ9Y3F4 350 aaKnown RBP4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 JRKLQ9Y4A0 524 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 RBM8AQ9Y5S9 174 aaKnown RBP4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 SNX14Q9Y5W7 946 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 RAD54BQ9Y620 910 aa4.07□□□□□ -1.76
RNU4-60P-201ENST00000517239 NSD2O96028 1365 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 AOX1Q06278 1338 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 FAM205AQ6ZU69 1335 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 TMEM265A0A087WTH1 108 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 LOC102723996A0A087X1L8 192 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 ARPC4-TTLL3A0A0A6YYG9 625 aa4.06□□□□□ -1.76
RNU4-60P-201ENST00000517239 EDDM13A0A1B0GTR0 161 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms