RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 DHRS13Q6UX07 377 aa-1.02□□□□□ -2.57
SNORA40.16-201ENST00000517238 TSPAN33Q86UF1 283 aa-1.02□□□□□ -2.57
SNORA40.16-201ENST00000517238 FAM169BQ8N8A8 192 aa-1.02□□□□□ -2.57
SNORA40.16-201ENST00000517238 BICD2Q8TD16 824 aa-1.02□□□□□ -2.57
SNORA40.16-201ENST00000517238 AFAP1L1Q8TED9 768 aa-1.02□□□□□ -2.57
SNORA40.16-201ENST00000517238 SMARCD2Q92925 531 aa-1.02□□□□□ -2.57
SNORA40.16-201ENST00000517238 TRIM63Q969Q1 353 aa-1.02□□□□□ -2.57
SNORA40.16-201ENST00000517238 MTFMTQ96DP5 389 aaKnown RBP-1.02□□□□□ -2.57
SNORA40.16-201ENST00000517238 ERLEC1Q96DZ1 483 aa-1.02□□□□□ -2.57
SNORA40.16-201ENST00000517238 TMEM19Q96HH6 336 aa-1.02□□□□□ -2.57
SNORA40.16-201ENST00000517238 LRRC1Q9BTT6 524 aa-1.02□□□□□ -2.57
SNORA40.16-201ENST00000517238 TANGO6Q9C0B7 1094 aa-1.02□□□□□ -2.57
SNORA40.16-201ENST00000517238 IKZF5Q9H5V7 419 aa-1.02□□□□□ -2.57
SNORA40.16-201ENST00000517238 CAMSAP3Q9P1Y5 1249 aaPredicted RBP-1.02□□□□□ -2.57
SNORA40.16-201ENST00000517238 EDARQ9UNE0 448 aa-1.02□□□□□ -2.57
SNORA40.16-201ENST00000517238 EMSYQ7Z589 1322 aa-1.03□□□□□ -2.57
SNORA40.16-201ENST00000517238 STAB1Q9NY15 2570 aa-1.03□□□□□ -2.57
SNORA40.16-201ENST00000517238 IGLV4-60A0A075B6I1 120 aa-1.03□□□□□ -2.57
SNORA40.16-201ENST00000517238 hCG_1984214I3L0E3 225 aa-1.03□□□□□ -2.57
SNORA40.16-201ENST00000517238 NEMP1O14524 444 aa-1.03□□□□□ -2.57
SNORA40.16-201ENST00000517238 PHF1O43189 567 aaPredicted RBP-1.03□□□□□ -2.57
SNORA40.16-201ENST00000517238 SORBS3O60504 671 aa-1.03□□□□□ -2.57
SNORA40.16-201ENST00000517238 TIPRLO75663 272 aa-1.03□□□□□ -2.57
SNORA40.16-201ENST00000517238 NPTXRO95502 500 aa-1.03□□□□□ -2.57
SNORA40.16-201ENST00000517238 LPLP06858 475 aa-1.03□□□□□ -2.57
SNORA40.16-201ENST00000517238 CSF1RP07333 972 aa-1.03□□□□□ -2.57
SNORA40.16-201ENST00000517238 HMBSP08397 361 aa-1.03□□□□□ -2.57
SNORA40.16-201ENST00000517238 HOXB7P09629 217 aa-1.03□□□□□ -2.57
SNORA40.16-201ENST00000517238 ATXN1LP0C7T5 689 aaKnown RBP-1.03□□□□□ -2.57
SNORA40.16-201ENST00000517238 ZNF14P17017 642 aaPredicted RBP-1.03□□□□□ -2.57
SNORA40.16-201ENST00000517238 CYP2C19P33261 490 aa-1.03□□□□□ -2.57
SNORA40.16-201ENST00000517238 GSCP56915 257 aaPredicted RBP-1.03□□□□□ -2.57
SNORA40.16-201ENST00000517238 BRWD1-AS2P59051 145 aa-1.03□□□□□ -2.57
SNORA40.16-201ENST00000517238 CCT2P78371 535 aaKnown RBP-1.03□□□□□ -2.57
SNORA40.16-201ENST00000517238 TXNL4AP83876 142 aaKnown RBP-1.03□□□□□ -2.57
SNORA40.16-201ENST00000517238 TDGQ13569 410 aa-1.03□□□□□ -2.57
SNORA40.16-201ENST00000517238 TTC31Q49AM3 519 aaPredicted RBP-1.03□□□□□ -2.57
SNORA40.16-201ENST00000517238 SH2D5Q6ZV89 423 aa-1.03□□□□□ -2.57
SNORA40.16-201ENST00000517238 AMIGO1Q86WK6 493 aa-1.03□□□□□ -2.57
SNORA40.16-201ENST00000517238 CROCCP3Q8IVE0 287 aa-1.03□□□□□ -2.57
SNORA40.16-201ENST00000517238 MKXQ8IYA7 352 aa-1.03□□□□□ -2.57
SNORA40.16-201ENST00000517238 RNF175Q8N4F7 328 aa-1.03□□□□□ -2.57
SNORA40.16-201ENST00000517238 LINC00304Q8N9R0 145 aa-1.03□□□□□ -2.57
SNORA40.16-201ENST00000517238 FAM71DQ8N9W8 422 aa-1.03□□□□□ -2.57
SNORA40.16-201ENST00000517238 FAM47BQ8NA70 645 aa-1.03□□□□□ -2.57
SNORA40.16-201ENST00000517238 SYT14Q8NB59 555 aa-1.03□□□□□ -2.57
SNORA40.16-201ENST00000517238 RELL2Q8NC24 303 aaPredicted RBP-1.03□□□□□ -2.57
SNORA40.16-201ENST00000517238 CHST14Q8NCH0 376 aa-1.03□□□□□ -2.57
SNORA40.16-201ENST00000517238 PRSS33Q8NF86 280 aa-1.03□□□□□ -2.57
SNORA40.16-201ENST00000517238 ZFPM2Q8WW38 1151 aa-1.03□□□□□ -2.57
SNORA40.16-201ENST00000517238 FCAMRQ8WWV6 532 aa-1.03□□□□□ -2.57
SNORA40.16-201ENST00000517238 GTF3AQ92664 365 aaKnown RBP-1.03□□□□□ -2.57
SNORA40.16-201ENST00000517238 C3orf30Q96M34 536 aa-1.03□□□□□ -2.57
SNORA40.16-201ENST00000517238 P2RX7Q99572 595 aaKnown RBP-1.03□□□□□ -2.57
SNORA40.16-201ENST00000517238 SMR3AQ99954 134 aa-1.03□□□□□ -2.57
SNORA40.16-201ENST00000517238 C16orf70Q9BSU1 422 aa-1.03□□□□□ -2.57
SNORA40.16-201ENST00000517238 LDHAL6BQ9BYZ2 381 aaPredicted RBP-1.03□□□□□ -2.57
SNORA40.16-201ENST00000517238 TP63Q9H3D4 680 aaPredicted RBP-1.03□□□□□ -2.57
SNORA40.16-201ENST00000517238 KCTD10Q9H3F6 313 aa-1.03□□□□□ -2.57
SNORA40.16-201ENST00000517238 TFB2MQ9H5Q4 396 aaKnown RBP-1.03□□□□□ -2.57
SNORA40.16-201ENST00000517238 PNRC2Q9NPJ4 139 aaKnown RBP-1.03□□□□□ -2.57
SNORA40.16-201ENST00000517238 KLHL1Q9NR64 748 aa-1.03□□□□□ -2.57
SNORA40.16-201ENST00000517238 GINM1Q9NU53 330 aa-1.03□□□□□ -2.57
SNORA40.16-201ENST00000517238 ASNSD1Q9NWL6 643 aa-1.03□□□□□ -2.57
SNORA40.16-201ENST00000517238 MAP3K20Q9NYL2 800 aaKnown RBP-1.03□□□□□ -2.57
SNORA40.16-201ENST00000517238 R3HDM2Q9Y2K5 976 aaKnown RBP-1.03□□□□□ -2.57
SNORA40.16-201ENST00000517238 MRPS17Q9Y2R5 130 aaKnown RBP-1.03□□□□□ -2.57
SNORA40.16-201ENST00000517238 SPO11Q9Y5K1 396 aa-1.03□□□□□ -2.57
SNORA40.16-201ENST00000517238 NCOR2Q9Y618 2525 aa-1.04□□□□□ -2.58
SNORA40.16-201ENST00000517238 APCP25054 2843 aa-1.04□□□□□ -2.58
SNORA40.16-201ENST00000517238 STK36Q9NRP7 1315 aa-1.04□□□□□ -2.58
SNORA40.16-201ENST00000517238 TRIM49BA6NDI0 452 aa-1.04□□□□□ -2.58
SNORA40.16-201ENST00000517238 A6NL46 340 aa-1.04□□□□□ -2.58
SNORA40.16-201ENST00000517238 RASA4O43374 803 aa-1.04□□□□□ -2.58
SNORA40.16-201ENST00000517238 HNRNPRO43390 633 aaKnown RBP-1.04□□□□□ -2.58
SNORA40.16-201ENST00000517238 PRAMEF2O60811 474 aa-1.04□□□□□ -2.58
SNORA40.16-201ENST00000517238 VNN2O95498 520 aa-1.04□□□□□ -2.58
SNORA40.16-201ENST00000517238 CHRNA3P32297 505 aa-1.04□□□□□ -2.58
SNORA40.16-201ENST00000517238 PPP3CCP48454 512 aa-1.04□□□□□ -2.58
SNORA40.16-201ENST00000517238 MECP2P51608 486 aaKnown RBP-1.04□□□□□ -2.58
SNORA40.16-201ENST00000517238 EFNA5P52803 228 aa-1.04□□□□□ -2.58
SNORA40.16-201ENST00000517238 WNT4P56705 351 aa-1.04□□□□□ -2.58
SNORA40.16-201ENST00000517238 CDK17Q00537 523 aa-1.04□□□□□ -2.58
SNORA40.16-201ENST00000517238 OCRLQ01968 901 aa-1.04□□□□□ -2.58
SNORA40.16-201ENST00000517238 KIF23Q02241 960 aaPredicted RBP-1.04□□□□□ -2.58
SNORA40.16-201ENST00000517238 RELQ04864 619 aaPredicted RBP-1.04□□□□□ -2.58
SNORA40.16-201ENST00000517238 LRRC32Q14392 662 aa-1.04□□□□□ -2.58
SNORA40.16-201ENST00000517238 COL28A1Q2UY09 1125 aa-1.04□□□□□ -2.58
SNORA40.16-201ENST00000517238 TNNI3KQ59H18 835 aa-1.04□□□□□ -2.58
SNORA40.16-201ENST00000517238 ATAT1Q5SQI0 421 aa-1.04□□□□□ -2.58
SNORA40.16-201ENST00000517238 RNLSQ5VYX0 342 aa-1.04□□□□□ -2.58
SNORA40.16-201ENST00000517238 Q6ZSR9 355 aa-1.04□□□□□ -2.58
SNORA40.16-201ENST00000517238 FGD2Q7Z6J4 655 aa-1.04□□□□□ -2.58
SNORA40.16-201ENST00000517238 ADAMTSL2Q86TH1 951 aa-1.04□□□□□ -2.58
SNORA40.16-201ENST00000517238 DDX42Q86XP3 938 aaKnown RBP eCLIP-1.04□□□□□ -2.58
SNORA40.16-201ENST00000517238 PDSS2Q86YH6 399 aa-1.04□□□□□ -2.58
SNORA40.16-201ENST00000517238 RHPN2Q8IUC4 686 aa-1.04□□□□□ -2.58
SNORA40.16-201ENST00000517238 SLC25A41Q8N5S1 370 aa-1.04□□□□□ -2.58
SNORA40.16-201ENST00000517238 KDM1BQ8NB78 822 aa-1.04□□□□□ -2.58
SNORA40.16-201ENST00000517238 BBS10Q8TAM1 723 aa-1.04□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms