RNA–Protein interactions for RNA: ENST00000515982.1

SCARNA6-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 265 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6-201ENST00000515982 CHPFQ8IZ52 775 aa7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 CCDC33Q8N5R6 958 aa7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 C12orf50Q8NA57 414 aaPredicted RBP7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 NETO2Q8NC67 525 aa7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 SPATA4Q8NEY3 305 aa7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 USP33Q8TEY7 942 aa7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 SORCS1Q8WY21 1168 aa7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 ATG4AQ8WYN0 398 aa7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 PBXIP1Q96AQ6 731 aa7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 RPL10LQ96L21 214 aaKnown RBP7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 MRGPRX3Q96LB0 322 aa7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 PPP1R2P1Q96PQ5 205 aa7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 PSKH2Q96QS6 385 aa7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 IL12RB2Q99665 862 aa7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 PRRX2Q99811 253 aa7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 IER2Q9BTL4 223 aa7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 CINPQ9BW66 212 aaPredicted RBP7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 TMEM245Q9H330 911 aa7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 USP29Q9HBJ7 922 aa7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 SLCO3A1Q9UIG8 710 aa7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 STON1Q9Y6Q2 735 aa7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 KIAA1549LQ6ZVL6 1849 aa7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 SHROOM3Q8TF72 1996 aa7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 EDDM13A0A1B0GTR0 161 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 CTAGE15A4D2H0 777 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 TMEM221A6NGB7 291 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 CHURC1-FNTBB4DL54 471 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 M0R296 226 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 KCNK1O00180 336 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 PDE2AO00408 941 aaPredicted RBP7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 ALOX15BO15296 676 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 PSMD3O43242 534 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 SMAD6O43541 496 aaKnown RBP7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 OPHN1O60890 802 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 RNASEH1O60930 286 aaKnown RBP7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 RNF40O75150 1001 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 GCATO75600 419 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 TMCC1O94876 653 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 KLF8O95600 359 aaPredicted RBP7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 POP4O95707 220 aaKnown RBP7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 CD160O95971 181 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 IGSF6O95976 241 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 GAS8O95995 478 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 PEX11BO96011 259 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 GSRP00390 522 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 CTAGE8P0CG41 777 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 PTPN3P26045 913 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 RPS9P46781 194 aaKnown RBP7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 STK19P49842 368 aaPredicted RBP7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 CLCN5P51795 746 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 SEC13P55735 322 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 RHOAP61586 193 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 TUBB4BP68371 445 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 ITKQ08881 620 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 SLC10A7Q0GE19 358 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 SFSWAPQ12872 951 aaKnown RBP7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 ENPP2Q13822 863 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 PRPSAP1Q14558 356 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 STARD3Q14849 445 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 P3H1Q32P28 736 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 HNRNPA1L2Q32P51 320 aaKnown RBP7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 CARD16Q5EG05 197 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 EMC10Q5UCC4 262 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 EGFLAMQ63HQ2 1017 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 ITPRIPL1Q6GPH6 555 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 CCDC137Q6PK04 289 aaKnown RBP7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 LEKR1Q6ZMV7 388 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 SYDE1Q6ZW31 735 aaPredicted RBP7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 ZNF572Q7Z3I7 529 aaPredicted RBP7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 DSG4Q86SJ6 1040 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 CTAGE6Q86UF2 777 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 SFTPA1Q8IWL2 248 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 CTAGE4Q8IX94 777 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 ZNF687Q8N1G0 1237 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 RYBPQ8N488 228 aaPredicted RBP7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 CCDC89Q8N998 374 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 FAM71DQ8N9W8 422 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 IL17RCQ8NAC3 791 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 TXNDC5Q8NBS9 432 aaKnown RBP7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 FLCNQ8NFG4 579 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 PJA1Q8NG27 643 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 RPLP0P6Q8NHW5 317 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 CCHCR1Q8TD31 782 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 EZH1Q92800 747 aaPredicted RBP7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 CLDN23Q96B33 292 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 LRRC45Q96CN5 670 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 LRIG1Q96JA1 1093 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 TEKT5Q96M29 485 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 GDAP1L1Q96MZ0 367 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 SPATA13Q96N96 652 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 FAM118BQ9BPY3 351 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 TMEM121Q9BTD3 319 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 POLR1EQ9GZS1 481 aaKnown RBP7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 FBRSQ9HAH7 460 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 NT5MQ9NPB1 228 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 SMARCAL1Q9NZC9 954 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 SEPT10Q9P0V9 454 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 KLHL8Q9P2G9 620 aaPredicted RBP7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 PCYOX1Q9UHG3 505 aa7.18□□□□□ -1.26
SCARNA6-201ENST00000515982 ATP8A1Q9Y2Q0 1164 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms