RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 UBA2Q9UBT2 640 aaPredicted RBP20.43■□□□□ 0.86
TRIO-223ENST00000515710 SEPT3Q9UH03 358 aa20.43■□□□□ 0.86
TRIO-223ENST00000515710 SOX13Q9UN79 622 aa20.43■□□□□ 0.86
TRIO-223ENST00000515710 FAM169AQ9Y6X4 670 aa20.43■□□□□ 0.86
TRIO-223ENST00000515710 LEFTY2O00292 366 aa20.42■□□□□ 0.86
TRIO-223ENST00000515710 PIAS1O75925 651 aa20.42■□□□□ 0.86
TRIO-223ENST00000515710 CREB1P16220 341 aa20.42■□□□□ 0.86
TRIO-223ENST00000515710 LSP1P33241 339 aa20.42■□□□□ 0.86
TRIO-223ENST00000515710 WNT3AP56704 352 aa20.42■□□□□ 0.86
TRIO-223ENST00000515710 MAXP61244 160 aa20.42■□□□□ 0.86
TRIO-223ENST00000515710 STXBP5Q5T5C0 1151 aa20.42■□□□□ 0.86
TRIO-223ENST00000515710 DENND5AQ6IQ26 1287 aa20.42■□□□□ 0.86
TRIO-223ENST00000515710 PGBD5Q8N414 524 aa20.42■□□□□ 0.86
TRIO-223ENST00000515710 CARNMT1Q8N4J0 409 aa20.42■□□□□ 0.86
TRIO-223ENST00000515710 ARRDC2Q8TBH0 407 aa20.42■□□□□ 0.86
TRIO-223ENST00000515710 MZB1Q8WU39 189 aa20.42■□□□□ 0.86
TRIO-223ENST00000515710 ARNT2Q9HBZ2 717 aa20.42■□□□□ 0.86
TRIO-223ENST00000515710 SSU72Q9NP77 194 aaKnown RBP20.42■□□□□ 0.86
TRIO-223ENST00000515710 INTS9Q9NV88 658 aaKnown RBP20.42■□□□□ 0.86
TRIO-223ENST00000515710 ZMYM5Q9UJ78 669 aa20.42■□□□□ 0.86
TRIO-223ENST00000515710 TMEM120BA0PK00 339 aa20.41■□□□□ 0.86
TRIO-223ENST00000515710 FOXO6A8MYZ6 492 aa20.41■□□□□ 0.86
TRIO-223ENST00000515710 MOSPD3O75425 235 aa20.41■□□□□ 0.86
TRIO-223ENST00000515710 LUC7L3O95232 432 aaKnown RBP20.41■□□□□ 0.86
TRIO-223ENST00000515710 SERPINB9P50453 376 aa20.41■□□□□ 0.86
TRIO-223ENST00000515710 HNRNPH2P55795 449 aaKnown RBP20.41■□□□□ 0.86
TRIO-223ENST00000515710 DSC2Q02487 901 aa20.41■□□□□ 0.86
TRIO-223ENST00000515710 ANKRD20A4Q4UJ75 823 aa20.41■□□□□ 0.86
TRIO-223ENST00000515710 MPPE1Q53F39 396 aa20.41■□□□□ 0.86
TRIO-223ENST00000515710 PCID2Q5JVF3 399 aa20.41■□□□□ 0.86
TRIO-223ENST00000515710 MPP7Q5T2T1 576 aa20.41■□□□□ 0.86
TRIO-223ENST00000515710 POTEHQ6S545 545 aa20.41■□□□□ 0.86
TRIO-223ENST00000515710 MARK2Q7KZI7 788 aaKnown RBP20.41■□□□□ 0.86
TRIO-223ENST00000515710 CMTM8Q8IZV2 173 aa20.41■□□□□ 0.86
TRIO-223ENST00000515710 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.41■□□□□ 0.86
TRIO-223ENST00000515710 PTCD2Q8WV60 388 aaKnown RBP20.41■□□□□ 0.86
TRIO-223ENST00000515710 KIFC1Q9BW19 673 aa20.41■□□□□ 0.86
TRIO-223ENST00000515710 MUC3BQ9H195 1237 aa20.41■□□□□ 0.86
TRIO-223ENST00000515710 SMG5Q9UPR3 1016 aaKnown RBP20.41■□□□□ 0.86
TRIO-223ENST00000515710 DENND4CQ5VZ89 1909 aa20.41■□□□□ 0.86
TRIO-223ENST00000515710 E2F8A0AVK6 867 aa20.41■□□□□ 0.86
TRIO-223ENST00000515710 NRG2O14511 850 aaPredicted RBP20.41■□□□□ 0.86
TRIO-223ENST00000515710 KRT37O76014 449 aa20.41■□□□□ 0.86
TRIO-223ENST00000515710 MMP2P08253 660 aa20.41■□□□□ 0.86
TRIO-223ENST00000515710 TPH1P17752 444 aa20.41■□□□□ 0.86
TRIO-223ENST00000515710 GBP2P32456 591 aaPredicted RBP20.41■□□□□ 0.86
TRIO-223ENST00000515710 AVPR1AP37288 418 aa20.41■□□□□ 0.86
TRIO-223ENST00000515710 CD86P42081 329 aa20.41■□□□□ 0.86
TRIO-223ENST00000515710 SLC18A1P54219 525 aa20.41■□□□□ 0.86
TRIO-223ENST00000515710 MGAT5Q09328 741 aa20.41■□□□□ 0.86
TRIO-223ENST00000515710 ALG1LQ6GMV1 187 aa20.41■□□□□ 0.86
TRIO-223ENST00000515710 TDRD5Q8NAT2 981 aaKnown RBP20.41■□□□□ 0.86
TRIO-223ENST00000515710 TCEAL4Q96EI5 215 aa20.41■□□□□ 0.86
TRIO-223ENST00000515710 PRKD2Q9BZL6 878 aa20.41■□□□□ 0.86
TRIO-223ENST00000515710 YBX2Q9Y2T7 364 aaKnown RBP20.41■□□□□ 0.86
TRIO-223ENST00000515710 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.4■□□□□ 0.86
TRIO-223ENST00000515710 A0A1W2PPM1 405 aa20.4■□□□□ 0.86
TRIO-223ENST00000515710 PRPF4O43172 522 aaKnown RBP eCLIP20.4■□□□□ 0.86
TRIO-223ENST00000515710 MT-ND3P03897 115 aa20.4■□□□□ 0.86
TRIO-223ENST00000515710 SNRPAP09012 282 aaKnown RBP20.4■□□□□ 0.86
TRIO-223ENST00000515710 TEAD2Q15562 447 aa20.4■□□□□ 0.86
TRIO-223ENST00000515710 SLC14A2Q15849 920 aa20.4■□□□□ 0.86
TRIO-223ENST00000515710 LEKR1Q6ZMV7 388 aa20.4■□□□□ 0.86
TRIO-223ENST00000515710 BBS7Q8IWZ6 715 aa20.4■□□□□ 0.86
TRIO-223ENST00000515710 ZNF669Q96BR6 464 aaPredicted RBP20.4■□□□□ 0.86
TRIO-223ENST00000515710 ALKBH8Q96BT7 664 aaKnown RBP20.4■□□□□ 0.86
TRIO-223ENST00000515710 MTBPQ96DY7 904 aa20.4■□□□□ 0.86
TRIO-223ENST00000515710 CERS2Q96G23 380 aa20.4■□□□□ 0.86
TRIO-223ENST00000515710 FCRL3Q96P31 734 aaPredicted RBP20.4■□□□□ 0.86
TRIO-223ENST00000515710 PSKH2Q96QS6 385 aa20.4■□□□□ 0.86
TRIO-223ENST00000515710 CINPQ9BW66 212 aaPredicted RBP20.4■□□□□ 0.86
TRIO-223ENST00000515710 LMAN2LQ9H0V9 348 aa20.4■□□□□ 0.86
TRIO-223ENST00000515710 MRM3Q9HC36 420 aaKnown RBP20.4■□□□□ 0.86
TRIO-223ENST00000515710 PPANQ9NQ55 473 aaKnown RBP20.4■□□□□ 0.86
TRIO-223ENST00000515710 ZNF197O14709 1029 aa20.39■□□□□ 0.86
TRIO-223ENST00000515710 PER2O15055 1255 aa20.39■□□□□ 0.86
TRIO-223ENST00000515710 KRT38O76015 456 aa20.39■□□□□ 0.86
TRIO-223ENST00000515710 CES1P23141 567 aa20.39■□□□□ 0.86
TRIO-223ENST00000515710 CNTFP26441 200 aa20.39■□□□□ 0.86
TRIO-223ENST00000515710 PKN3Q6P5Z2 889 aa20.39■□□□□ 0.86
TRIO-223ENST00000515710 SH3RF2Q8TEC5 729 aa20.39■□□□□ 0.86
TRIO-223ENST00000515710 DDI1Q8WTU0 396 aa20.39■□□□□ 0.86
TRIO-223ENST00000515710 SEMA3CQ99985 751 aa20.39■□□□□ 0.86
TRIO-223ENST00000515710 MGME1Q9BQP7 344 aa20.39■□□□□ 0.86
TRIO-223ENST00000515710 CHRAC1Q9NRG0 131 aa20.39■□□□□ 0.86
TRIO-223ENST00000515710 NKIRAS1Q9NYS0 192 aa20.39■□□□□ 0.86
TRIO-223ENST00000515710 HCFC2Q9Y5Z7 792 aa20.39■□□□□ 0.86
TRIO-223ENST00000515710 CHD5Q8TDI0 1954 aa20.39■□□□□ 0.85
TRIO-223ENST00000515710 ZCWPW2A0A1B0GU75 182 aa20.39■□□□□ 0.85
TRIO-223ENST00000515710 SCAMP3O14828 347 aaKnown RBP20.39■□□□□ 0.85
TRIO-223ENST00000515710 FAM155BO75949 473 aa20.39■□□□□ 0.85
TRIO-223ENST00000515710 CDH18Q13634 790 aa20.39■□□□□ 0.85
TRIO-223ENST00000515710 PCSK7Q16549 785 aa20.39■□□□□ 0.85
TRIO-223ENST00000515710 CES3Q6UWW8 571 aa20.39■□□□□ 0.85
TRIO-223ENST00000515710 TTC16Q8NEE8 873 aa20.39■□□□□ 0.85
TRIO-223ENST00000515710 PPHLN1Q8NEY8 458 aaKnown RBP20.39■□□□□ 0.85
TRIO-223ENST00000515710 CCDC195A0A1B0GUA6 201 aa20.38■□□□□ 0.85
TRIO-223ENST00000515710 FAM47DPA6NHR8 397 aa20.38■□□□□ 0.85
TRIO-223ENST00000515710 CBX4O00257 560 aa20.38■□□□□ 0.85
TRIO-223ENST00000515710 ADRA1DP25100 572 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms