RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 ATXN7L2Q5T6C5 722 aaPredicted RBP14.19□□□□□ -0.14
USP46-209ENST00000514536 NCBP2-AS2Q69YL0 99 aa14.19□□□□□ -0.14
USP46-209ENST00000514536 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.19□□□□□ -0.14
USP46-209ENST00000514536 TMIEQ8NEW7 156 aa14.19□□□□□ -0.14
USP46-209ENST00000514536 OR6K2Q8NGY2 324 aa14.19□□□□□ -0.14
USP46-209ENST00000514536 KIAA1524Q8TCG1 905 aa14.19□□□□□ -0.14
USP46-209ENST00000514536 GRIN3AQ8TCU5 1115 aa14.19□□□□□ -0.14
USP46-209ENST00000514536 RNF157Q96PX1 679 aa14.19□□□□□ -0.14
USP46-209ENST00000514536 HEPHQ9BQS7 1158 aa14.19□□□□□ -0.14
USP46-209ENST00000514536 MAK16Q9BXY0 300 aaKnown RBP14.19□□□□□ -0.14
USP46-209ENST00000514536 BTBD1Q9H0C5 482 aa14.19□□□□□ -0.14
USP46-209ENST00000514536 IL36AQ9UHA7 158 aa14.19□□□□□ -0.14
USP46-209ENST00000514536 KPNA3O00505 521 aaPredicted RBP14.18□□□□□ -0.14
USP46-209ENST00000514536 PSTPIP1O43586 416 aa14.18□□□□□ -0.14
USP46-209ENST00000514536 LEFTY1O75610 366 aa14.18□□□□□ -0.14
USP46-209ENST00000514536 PALMO75781 387 aa14.18□□□□□ -0.14
USP46-209ENST00000514536 EPN2O95208 641 aa14.18□□□□□ -0.14
USP46-209ENST00000514536 GSRP00390 522 aa14.18□□□□□ -0.14
USP46-209ENST00000514536 GKP32189 559 aa14.18□□□□□ -0.14
USP46-209ENST00000514536 RHOAP61586 193 aa14.18□□□□□ -0.14
USP46-209ENST00000514536 SNRPD1P62314 119 aaKnown RBP14.18□□□□□ -0.14
USP46-209ENST00000514536 SPEM2Q0P670 501 aa14.18□□□□□ -0.14
USP46-209ENST00000514536 PAFAH1B3Q15102 231 aaKnown RBP14.18□□□□□ -0.14
USP46-209ENST00000514536 CCDC6Q16204 474 aa14.18□□□□□ -0.14
USP46-209ENST00000514536 SPDYCQ5MJ68 293 aa14.18□□□□□ -0.14
USP46-209ENST00000514536 SLC41A1Q8IVJ1 513 aa14.18□□□□□ -0.14
USP46-209ENST00000514536 PLPP6Q8IY26 295 aa14.18□□□□□ -0.14
USP46-209ENST00000514536 OR2AP1Q8NGE2 309 aa14.18□□□□□ -0.14
USP46-209ENST00000514536 PIGKQ92643 395 aa14.18□□□□□ -0.14
USP46-209ENST00000514536 ZNF419Q96HQ0 510 aaPredicted RBP14.18□□□□□ -0.14
USP46-209ENST00000514536 ZDHHC6Q9H6R6 413 aa14.18□□□□□ -0.14
USP46-209ENST00000514536 SGK2Q9HBY8 427 aa14.18□□□□□ -0.14
USP46-209ENST00000514536 WASF2Q9Y6W5 498 aa14.18□□□□□ -0.14
USP46-209ENST00000514536 BCLAF3A2AJT9 711 aaKnown RBP14.17□□□□□ -0.14
USP46-209ENST00000514536 GRID2IPA4D2P6 1211 aa14.17□□□□□ -0.14
USP46-209ENST00000514536 FAM47DPA6NHR8 397 aa14.17□□□□□ -0.14
USP46-209ENST00000514536 KRIT1O00522 736 aa14.17□□□□□ -0.14
USP46-209ENST00000514536 MFSD11O43934 449 aa14.17□□□□□ -0.14
USP46-209ENST00000514536 MAP3K6O95382 1288 aa14.17□□□□□ -0.14
USP46-209ENST00000514536 POP4O95707 220 aaKnown RBP14.17□□□□□ -0.14
USP46-209ENST00000514536 DRD3P35462 400 aa14.17□□□□□ -0.14
USP46-209ENST00000514536 MARCKSL1P49006 195 aa14.17□□□□□ -0.14
USP46-209ENST00000514536 CCZ1BP86790 482 aa14.17□□□□□ -0.14
USP46-209ENST00000514536 CCZ1P86791 482 aaPredicted RBP14.17□□□□□ -0.14
USP46-209ENST00000514536 CNTN1Q12860 1018 aa14.17□□□□□ -0.14
USP46-209ENST00000514536 LYSMD4Q5XG99 296 aa14.17□□□□□ -0.14
USP46-209ENST00000514536 MFSD7Q6UXD7 560 aa14.17□□□□□ -0.14
USP46-209ENST00000514536 CYP2U1Q7Z449 544 aa14.17□□□□□ -0.14
USP46-209ENST00000514536 RFX6Q8HWS3 928 aa14.17□□□□□ -0.14
USP46-209ENST00000514536 NUP205Q92621 2012 aa14.17□□□□□ -0.14
USP46-209ENST00000514536 KRT35Q92764 455 aa14.17□□□□□ -0.14
USP46-209ENST00000514536 ARRDC3Q96B67 414 aa14.17□□□□□ -0.14
USP46-209ENST00000514536 HSPA12BQ96MM6 686 aa14.17□□□□□ -0.14
USP46-209ENST00000514536 GDAP1L1Q96MZ0 367 aa14.17□□□□□ -0.14
USP46-209ENST00000514536 C6orf106Q9H6K1 298 aaPredicted RBP14.17□□□□□ -0.14
USP46-209ENST00000514536 LHX3Q9UBR4 397 aa14.17□□□□□ -0.14
USP46-209ENST00000514536 EVLQ9UI08 416 aaPredicted RBP14.17□□□□□ -0.14
USP46-209ENST00000514536 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.17□□□□□ -0.14
USP46-209ENST00000514536 PCDHGA5Q9Y5G8 931 aa14.17□□□□□ -0.14
USP46-209ENST00000514536 CHD5Q8TDI0 1954 aa14.17□□□□□ -0.14
USP46-209ENST00000514536 METTL12A8MUP2 240 aa14.17□□□□□ -0.14
USP46-209ENST00000514536 ZNF487B1APH4 448 aa14.17□□□□□ -0.14
USP46-209ENST00000514536 NRDCO43847 1150 aa14.17□□□□□ -0.14
USP46-209ENST00000514536 MAFKO60675 156 aa14.17□□□□□ -0.14
USP46-209ENST00000514536 ZRANB2O95218 330 aaKnown RBP eCLIP14.17□□□□□ -0.14
USP46-209ENST00000514536 SEMA4FO95754 770 aa14.17□□□□□ -0.14
USP46-209ENST00000514536 IGSF6O95976 241 aa14.17□□□□□ -0.14
USP46-209ENST00000514536 ITPKAP23677 461 aa14.17□□□□□ -0.14
USP46-209ENST00000514536 MAOBP27338 520 aa14.17□□□□□ -0.14
USP46-209ENST00000514536 GBE1Q04446 702 aa14.17□□□□□ -0.14
USP46-209ENST00000514536 SLC10A2Q12908 348 aaPredicted RBP14.17□□□□□ -0.14
USP46-209ENST00000514536 LLGL1Q15334 1064 aa14.17□□□□□ -0.14
USP46-209ENST00000514536 IFI16Q16666 785 aaKnown RBP14.17□□□□□ -0.14
USP46-209ENST00000514536 VSIG1Q86XK7 387 aa14.17□□□□□ -0.14
USP46-209ENST00000514536 RCOR2Q8IZ40 523 aa14.17□□□□□ -0.14
USP46-209ENST00000514536 ATPAF2Q8N5M1 289 aa14.17□□□□□ -0.14
USP46-209ENST00000514536 LRRC57Q8N9N7 239 aa14.17□□□□□ -0.14
USP46-209ENST00000514536 TSEN2Q8NCE0 465 aaKnown RBP14.17□□□□□ -0.14
USP46-209ENST00000514536 CADM4Q8NFZ8 388 aa14.17□□□□□ -0.14
USP46-209ENST00000514536 OR14C36Q8NHC7 312 aa14.17□□□□□ -0.14
USP46-209ENST00000514536 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.17□□□□□ -0.14
USP46-209ENST00000514536 ANP32BQ92688 251 aaKnown RBP14.17□□□□□ -0.14
USP46-209ENST00000514536 FOXJ1Q92949 421 aa14.17□□□□□ -0.14
USP46-209ENST00000514536 EXOC2Q96KP1 924 aa14.17□□□□□ -0.14
USP46-209ENST00000514536 DYRK4Q9NR20 520 aa14.17□□□□□ -0.14
USP46-209ENST00000514536 FZD4Q9ULV1 537 aa14.17□□□□□ -0.14
USP46-209ENST00000514536 GVINP1Q7Z2Y8 2422 aa14.16□□□□□ -0.14
USP46-209ENST00000514536 APOL1O14791 398 aa14.16□□□□□ -0.14
USP46-209ENST00000514536 INSIG1O15503 277 aa14.16□□□□□ -0.14
USP46-209ENST00000514536 MPLP40238 635 aa14.16□□□□□ -0.14
USP46-209ENST00000514536 GARSP41250 739 aaKnown RBP14.16□□□□□ -0.14
USP46-209ENST00000514536 RAD51Q06609 339 aa14.16□□□□□ -0.14
USP46-209ENST00000514536 SLC10A7Q0GE19 358 aa14.16□□□□□ -0.14
USP46-209ENST00000514536 GALNT2Q10471 571 aa14.16□□□□□ -0.14
USP46-209ENST00000514536 RFTN1Q14699 578 aaPredicted RBP14.16□□□□□ -0.14
USP46-209ENST00000514536 LBRQ14739 615 aaKnown RBP14.16□□□□□ -0.14
USP46-209ENST00000514536 DCAF12L1Q5VU92 463 aa14.16□□□□□ -0.14
USP46-209ENST00000514536 SLC9A4Q6AI14 798 aa14.16□□□□□ -0.14
USP46-209ENST00000514536 SPOCD1Q6ZMY3 1216 aa14.16□□□□□ -0.14
USP46-209ENST00000514536 LRRC49Q8IUZ0 686 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms