RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 E4F1Q66K89 784 aaPredicted RBP10.66□□□□□ -0.7
HMGXB3-205ENST00000514469 ACAD10Q6JQN1 1059 aa10.66□□□□□ -0.7
HMGXB3-205ENST00000514469 PPP1R2P3Q6NXS1 205 aa10.66□□□□□ -0.7
HMGXB3-205ENST00000514469 SPATS2Q86XZ4 545 aaKnown RBP10.66□□□□□ -0.7
HMGXB3-205ENST00000514469 PLPP6Q8IY26 295 aa10.66□□□□□ -0.7
HMGXB3-205ENST00000514469 PYROXD2Q8N2H3 581 aa10.66□□□□□ -0.7
HMGXB3-205ENST00000514469 OXR1Q8N573 874 aa10.66□□□□□ -0.7
HMGXB3-205ENST00000514469 RTL3Q8N8U3 475 aaKnown RBP10.66□□□□□ -0.7
HMGXB3-205ENST00000514469 SAP25Q8TEE9 199 aa10.66□□□□□ -0.7
HMGXB3-205ENST00000514469 VOPP1Q96AW1 172 aa10.66□□□□□ -0.7
HMGXB3-205ENST00000514469 ISG20Q96AZ6 181 aaKnown RBP10.66□□□□□ -0.7
HMGXB3-205ENST00000514469 VCPIP1Q96JH7 1222 aa10.66□□□□□ -0.7
HMGXB3-205ENST00000514469 HEPHQ9BQS7 1158 aa10.66□□□□□ -0.7
HMGXB3-205ENST00000514469 CNPY3Q9BT09 278 aa10.66□□□□□ -0.7
HMGXB3-205ENST00000514469 TTYH3Q9C0H2 523 aa10.66□□□□□ -0.7
HMGXB3-205ENST00000514469 DYRK4Q9NR20 520 aa10.66□□□□□ -0.7
HMGXB3-205ENST00000514469 TAS2R14Q9NYV8 317 aa10.66□□□□□ -0.7
HMGXB3-205ENST00000514469 DNAI1Q9UI46 699 aa10.66□□□□□ -0.7
HMGXB3-205ENST00000514469 ZMIZ1Q9ULJ6 1067 aa10.66□□□□□ -0.7
HMGXB3-205ENST00000514469 FZD10Q9ULW2 581 aa10.66□□□□□ -0.7
HMGXB3-205ENST00000514469 ACTL7AQ9Y615 435 aa10.66□□□□□ -0.7
HMGXB3-205ENST00000514469 A0A1W2PQU0 124 aa10.65□□□□□ -0.7
HMGXB3-205ENST00000514469 MAGEC1O60732 1142 aa10.65□□□□□ -0.7
HMGXB3-205ENST00000514469 GSRP00390 522 aa10.65□□□□□ -0.7
HMGXB3-205ENST00000514469 ADRB3P13945 408 aa10.65□□□□□ -0.7
HMGXB3-205ENST00000514469 PRKCIP41743 596 aa10.65□□□□□ -0.7
HMGXB3-205ENST00000514469 RXRGP48443 463 aa10.65□□□□□ -0.7
HMGXB3-205ENST00000514469 ARRB1P49407 418 aaPredicted RBP10.65□□□□□ -0.7
HMGXB3-205ENST00000514469 ZNF165P49910 485 aa10.65□□□□□ -0.7
HMGXB3-205ENST00000514469 NEK3P51956 506 aa10.65□□□□□ -0.7
HMGXB3-205ENST00000514469 OGDHQ02218 1023 aa10.65□□□□□ -0.7
HMGXB3-205ENST00000514469 IQCB1Q15051 598 aa10.65□□□□□ -0.7
HMGXB3-205ENST00000514469 ZNF284Q2VY69 593 aa10.65□□□□□ -0.7
HMGXB3-205ENST00000514469 TMEM259Q4ZIN3 620 aa10.65□□□□□ -0.7
HMGXB3-205ENST00000514469 PRAMEF14Q5SWL7 426 aa10.65□□□□□ -0.7
HMGXB3-205ENST00000514469 SFMBT2Q5VUG0 894 aa10.65□□□□□ -0.7
HMGXB3-205ENST00000514469 PARS2Q7L3T8 475 aaKnown RBP10.65□□□□□ -0.7
HMGXB3-205ENST00000514469 KANSL1Q7Z3B3 1105 aa10.65□□□□□ -0.7
HMGXB3-205ENST00000514469 HORMAD1Q86X24 394 aa10.65□□□□□ -0.7
HMGXB3-205ENST00000514469 GATAD2AQ86YP4 633 aa10.65□□□□□ -0.7
HMGXB3-205ENST00000514469 ZCCHC14Q8WYQ9 949 aaKnown RBP10.65□□□□□ -0.7
HMGXB3-205ENST00000514469 EPAS1Q99814 870 aa10.65□□□□□ -0.7
HMGXB3-205ENST00000514469 TM6SF2Q9BZW4 377 aa10.65□□□□□ -0.7
HMGXB3-205ENST00000514469 NOL6Q9H6R4 1146 aaKnown RBP10.65□□□□□ -0.7
HMGXB3-205ENST00000514469 ZDHHC6Q9H6R6 413 aa10.65□□□□□ -0.7
HMGXB3-205ENST00000514469 AIPL1Q9NZN9 384 aa10.65□□□□□ -0.7
HMGXB3-205ENST00000514469 FTSJ1Q9UET6 329 aa10.65□□□□□ -0.7
HMGXB3-205ENST00000514469 ZFR2Q9UPR6 939 aaKnown RBP10.65□□□□□ -0.7
HMGXB3-205ENST00000514469 CA5BQ9Y2D0 317 aa10.65□□□□□ -0.7
HMGXB3-205ENST00000514469 GON4LQ3T8J9 2241 aa10.65□□□□□ -0.71
HMGXB3-205ENST00000514469 ITPR1Q14643 2758 aa10.64□□□□□ -0.71
HMGXB3-205ENST00000514469 CFAP47Q6ZTR5 3102 aa10.64□□□□□ -0.71
HMGXB3-205ENST00000514469 TPRP12270 2363 aaKnown RBP10.64□□□□□ -0.71
HMGXB3-205ENST00000514469 ZSCAN5CA6NGD5 496 aaPredicted RBP10.64□□□□□ -0.71
HMGXB3-205ENST00000514469 WASH4PA8MWX3 477 aa10.64□□□□□ -0.71
HMGXB3-205ENST00000514469 ATMINO43313 823 aaPredicted RBP10.64□□□□□ -0.71
HMGXB3-205ENST00000514469 KDELR3O43731 214 aa10.64□□□□□ -0.71
HMGXB3-205ENST00000514469 AP1G1O43747 822 aa10.64□□□□□ -0.71
HMGXB3-205ENST00000514469 CAPNS1P04632 268 aa10.64□□□□□ -0.71
HMGXB3-205ENST00000514469 ITGAVP06756 1048 aa10.64□□□□□ -0.71
HMGXB3-205ENST00000514469 PRLRP16471 622 aa10.64□□□□□ -0.71
HMGXB3-205ENST00000514469 TNFAIP3P21580 790 aa10.64□□□□□ -0.71
HMGXB3-205ENST00000514469 HNRNPA2B1P22626 353 aaKnown RBP10.64□□□□□ -0.71
HMGXB3-205ENST00000514469 EPHB2P29323 1055 aa10.64□□□□□ -0.71
HMGXB3-205ENST00000514469 HTR7P34969 479 aa10.64□□□□□ -0.71
HMGXB3-205ENST00000514469 DNA2P51530 1060 aa10.64□□□□□ -0.71
HMGXB3-205ENST00000514469 MAMLD1Q13495 774 aa10.64□□□□□ -0.71
HMGXB3-205ENST00000514469 STAT4Q14765 748 aa10.64□□□□□ -0.71
HMGXB3-205ENST00000514469 POLD3Q15054 466 aaPredicted RBP10.64□□□□□ -0.71
HMGXB3-205ENST00000514469 ASIC2Q16515 512 aa10.64□□□□□ -0.71
HMGXB3-205ENST00000514469 FILIP1LQ4L180 1135 aa10.64□□□□□ -0.71
HMGXB3-205ENST00000514469 SEL1L3Q68CR1 1132 aa10.64□□□□□ -0.71
HMGXB3-205ENST00000514469 PLEKHA7Q6IQ23 1121 aa10.64□□□□□ -0.71
HMGXB3-205ENST00000514469 KIAA1161Q6NSJ0 714 aa10.64□□□□□ -0.71
HMGXB3-205ENST00000514469 SCYL2Q6P3W7 929 aa10.64□□□□□ -0.71
HMGXB3-205ENST00000514469 DCUN1D2Q6PH85 259 aa10.64□□□□□ -0.71
HMGXB3-205ENST00000514469 CCNI2Q6ZMN8 369 aaPredicted RBP10.64□□□□□ -0.71
HMGXB3-205ENST00000514469 GCNT7Q6ZNI0 430 aa10.64□□□□□ -0.71
HMGXB3-205ENST00000514469 ZNF571Q7Z3V5 609 aaPredicted RBP10.64□□□□□ -0.71
HMGXB3-205ENST00000514469 TMC6Q7Z403 805 aa10.64□□□□□ -0.71
HMGXB3-205ENST00000514469 OR2AP1Q8NGE2 309 aa10.64□□□□□ -0.71
HMGXB3-205ENST00000514469 LRIG1Q96JA1 1093 aa10.64□□□□□ -0.71
HMGXB3-205ENST00000514469 NAP1L5Q96NT1 182 aaPredicted RBP10.64□□□□□ -0.71
HMGXB3-205ENST00000514469 HAUS4Q9H6D7 363 aa10.64□□□□□ -0.71
HMGXB3-205ENST00000514469 FZD3Q9NPG1 666 aa10.64□□□□□ -0.71
HMGXB3-205ENST00000514469 PARVAQ9NVD7 372 aa10.64□□□□□ -0.71
HMGXB3-205ENST00000514469 HECAQ9UBI9 543 aaPredicted RBP10.64□□□□□ -0.71
HMGXB3-205ENST00000514469 HPCAL4Q9UM19 191 aa10.64□□□□□ -0.71
HMGXB3-205ENST00000514469 FADS3Q9Y5Q0 445 aa10.64□□□□□ -0.71
HMGXB3-205ENST00000514469 CHD5Q8TDI0 1954 aa10.64□□□□□ -0.71
HMGXB3-205ENST00000514469 DMXL2Q8TDJ6 3036 aa10.63□□□□□ -0.71
HMGXB3-205ENST00000514469 GOLGA8CPA6NN73 597 aa10.63□□□□□ -0.71
HMGXB3-205ENST00000514469 TMCO5BA8MYB1 307 aa10.63□□□□□ -0.71
HMGXB3-205ENST00000514469 RASA4BC9J798 803 aa10.63□□□□□ -0.71
HMGXB3-205ENST00000514469 SLC31A1O15431 190 aa10.63□□□□□ -0.71
HMGXB3-205ENST00000514469 FGF10O15520 208 aaPredicted RBP10.63□□□□□ -0.71
HMGXB3-205ENST00000514469 SPINT1O43278 529 aa10.63□□□□□ -0.71
HMGXB3-205ENST00000514469 RASA4O43374 803 aa10.63□□□□□ -0.71
HMGXB3-205ENST00000514469 CREB3O43889 395 aa10.63□□□□□ -0.71
HMGXB3-205ENST00000514469 TMCC1O94876 653 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms