RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 EVLQ9UI08 416 aaPredicted RBP20.57■□□□□ 0.88
USP53-208ENST00000514305 MBD1Q9UIS9 605 aaPredicted RBP20.57■□□□□ 0.88
USP53-208ENST00000514305 ANGPTL2Q9UKU9 493 aa20.57■□□□□ 0.88
USP53-208ENST00000514305 CLEC4EQ9ULY5 219 aa20.57■□□□□ 0.88
USP53-208ENST00000514305 TPRP12270 2363 aaKnown RBP20.57■□□□□ 0.88
USP53-208ENST00000514305 PI4KAP42356 2102 aa20.56■□□□□ 0.88
USP53-208ENST00000514305 C3orf70A6NLC5 250 aaPredicted RBP20.56■□□□□ 0.88
USP53-208ENST00000514305 USP27XA6NNY8 438 aa20.56■□□□□ 0.88
USP53-208ENST00000514305 RASA4BC9J798 803 aa20.56■□□□□ 0.88
USP53-208ENST00000514305 KCNK3O14649 394 aa20.56■□□□□ 0.88
USP53-208ENST00000514305 RASA4O43374 803 aa20.56■□□□□ 0.88
USP53-208ENST00000514305 ZNF189O75820 626 aaPredicted RBP20.56■□□□□ 0.88
USP53-208ENST00000514305 DLDP09622 509 aaKnown RBP20.56■□□□□ 0.88
USP53-208ENST00000514305 TGM2P21980 687 aa20.56■□□□□ 0.88
USP53-208ENST00000514305 PTGER3P43115 390 aa20.56■□□□□ 0.88
USP53-208ENST00000514305 DNA2P51530 1060 aa20.56■□□□□ 0.88
USP53-208ENST00000514305 ECT2LQ008S8 904 aa20.56■□□□□ 0.88
USP53-208ENST00000514305 RPL6Q02878 288 aaKnown RBP20.56■□□□□ 0.88
USP53-208ENST00000514305 DSG2Q14126 1118 aa20.56■□□□□ 0.88
USP53-208ENST00000514305 TAZQ16635 292 aa20.56■□□□□ 0.88
USP53-208ENST00000514305 GEN1Q17RS7 908 aa20.56■□□□□ 0.88
USP53-208ENST00000514305 TRIM61Q5EBN2 209 aa20.56■□□□□ 0.88
USP53-208ENST00000514305 TMCO4Q5TGY1 634 aa20.56■□□□□ 0.88
USP53-208ENST00000514305 KAZNQ674X7 775 aa20.56■□□□□ 0.88
USP53-208ENST00000514305 PSAPL1Q6NUJ1 521 aa20.56■□□□□ 0.88
USP53-208ENST00000514305 PLPP6Q8IY26 295 aa20.56■□□□□ 0.88
USP53-208ENST00000514305 TTC13Q8NBP0 860 aa20.56■□□□□ 0.88
USP53-208ENST00000514305 WFDC5Q8TCV5 224 aa20.56■□□□□ 0.88
USP53-208ENST00000514305 ARHGEF2Q92974 986 aaKnown RBP20.56■□□□□ 0.88
USP53-208ENST00000514305 PBKQ96KB5 322 aa20.56■□□□□ 0.88
USP53-208ENST00000514305 FERMT1Q9BQL6 677 aa20.56■□□□□ 0.88
USP53-208ENST00000514305 OSBPL8Q9BZF1 889 aa20.56■□□□□ 0.88
USP53-208ENST00000514305 BRD8Q9H0E9 1235 aa20.56■□□□□ 0.88
USP53-208ENST00000514305 hCG_1818297A0A087WSY0 165 aa20.55■□□□□ 0.88
USP53-208ENST00000514305 CTAGE9A4FU28 777 aa20.55■□□□□ 0.88
USP53-208ENST00000514305 PRRT4C9JH25 899 aa20.55■□□□□ 0.88
USP53-208ENST00000514305 KIF2AO00139 706 aaPredicted RBP20.55■□□□□ 0.88
USP53-208ENST00000514305 ZNF217O75362 1048 aa20.55■□□□□ 0.88
USP53-208ENST00000514305 MZF1P28698 734 aaPredicted RBP20.55■□□□□ 0.88
USP53-208ENST00000514305 MARCKSL1P49006 195 aa20.55■□□□□ 0.88
USP53-208ENST00000514305 NOVA1P51513 510 aaKnown RBP20.55■□□□□ 0.88
USP53-208ENST00000514305 IRX4P78413 519 aa20.55■□□□□ 0.88
USP53-208ENST00000514305 SLC9A4Q6AI14 798 aa20.55■□□□□ 0.88
USP53-208ENST00000514305 CASKIN2Q8WXE0 1202 aa20.55■□□□□ 0.88
USP53-208ENST00000514305 P3H4Q92791 437 aa20.55■□□□□ 0.88
USP53-208ENST00000514305 LMLNQ96KR4 655 aa20.55■□□□□ 0.88
USP53-208ENST00000514305 ACOX2Q99424 681 aa20.55■□□□□ 0.88
USP53-208ENST00000514305 NAP1L3Q99457 506 aaPredicted RBP20.55■□□□□ 0.88
USP53-208ENST00000514305 GABRG3Q99928 467 aa20.55■□□□□ 0.88
USP53-208ENST00000514305 HCN2Q9UL51 889 aa20.55■□□□□ 0.88
USP53-208ENST00000514305 ACACBO00763 2458 aa20.55■□□□□ 0.88
USP53-208ENST00000514305 A0A1W2PQF6 199 aa20.54■□□□□ 0.88
USP53-208ENST00000514305 DFFAO00273 331 aa20.54■□□□□ 0.88
USP53-208ENST00000514305 PPP1R12AO14974 1030 aaPredicted RBP20.54■□□□□ 0.88
USP53-208ENST00000514305 KDELR3O43731 214 aa20.54■□□□□ 0.88
USP53-208ENST00000514305 CST8O60676 142 aa20.54■□□□□ 0.88
USP53-208ENST00000514305 PYGMP11217 842 aa20.54■□□□□ 0.88
USP53-208ENST00000514305 HOXD12P35452 270 aa20.54■□□□□ 0.88
USP53-208ENST00000514305 FUT11Q495W5 492 aa20.54■□□□□ 0.88
USP53-208ENST00000514305 ARTNQ5T4W7 220 aa20.54■□□□□ 0.88
USP53-208ENST00000514305 NCBP2-AS2Q69YL0 99 aa20.54■□□□□ 0.88
USP53-208ENST00000514305 TIGD7Q6NT04 549 aaPredicted RBP20.54■□□□□ 0.88
USP53-208ENST00000514305 ADIPOR2Q86V24 386 aa20.54■□□□□ 0.88
USP53-208ENST00000514305 BBS5Q8N3I7 341 aa20.54■□□□□ 0.88
USP53-208ENST00000514305 ALG3Q92685 438 aa20.54■□□□□ 0.88
USP53-208ENST00000514305 P2RY11Q96G91 374 aa20.54■□□□□ 0.88
USP53-208ENST00000514305 NAPGQ99747 312 aaPredicted RBP20.54■□□□□ 0.88
USP53-208ENST00000514305 TLR10Q9BXR5 811 aa20.54■□□□□ 0.88
USP53-208ENST00000514305 ACE2Q9BYF1 805 aaPredicted RBP20.54■□□□□ 0.88
USP53-208ENST00000514305 LRRC19Q9H756 370 aa20.54■□□□□ 0.88
USP53-208ENST00000514305 SUN2Q9UH99 717 aa20.54■□□□□ 0.88
USP53-208ENST00000514305 ATXN2Q99700 1313 aaKnown RBP20.53■□□□□ 0.88
USP53-208ENST00000514305 A0A0D9SEW6 157 aa20.53■□□□□ 0.88
USP53-208ENST00000514305 CBX4O00257 560 aa20.53■□□□□ 0.88
USP53-208ENST00000514305 TCP1P17987 556 aaKnown RBP20.53■□□□□ 0.88
USP53-208ENST00000514305 PMLP29590 882 aa20.53■□□□□ 0.88
USP53-208ENST00000514305 SERINC3Q13530 473 aa20.53■□□□□ 0.88
USP53-208ENST00000514305 PDK1Q15118 436 aa20.53■□□□□ 0.88
USP53-208ENST00000514305 UAP1L1Q3KQV9 507 aa20.53■□□□□ 0.88
USP53-208ENST00000514305 BBS12Q6ZW61 710 aa20.53■□□□□ 0.88
USP53-208ENST00000514305 APCDD1Q8J025 514 aa20.53■□□□□ 0.88
USP53-208ENST00000514305 ATPAF2Q8N5M1 289 aa20.53■□□□□ 0.88
USP53-208ENST00000514305 OR7D4Q8NG98 312 aa20.53■□□□□ 0.88
USP53-208ENST00000514305 HAUS1Q96CS2 278 aa20.53■□□□□ 0.88
USP53-208ENST00000514305 ALG14Q96F25 216 aa20.53■□□□□ 0.88
USP53-208ENST00000514305 CELF6Q96J87 481 aaKnown RBP20.53■□□□□ 0.88
USP53-208ENST00000514305 SLC39A8Q9C0K1 460 aa20.53■□□□□ 0.88
USP53-208ENST00000514305 SP110Q9HB58 689 aa20.53■□□□□ 0.88
USP53-208ENST00000514305 NDFIP2Q9NV92 336 aa20.53■□□□□ 0.88
USP53-208ENST00000514305 CACNA2D2Q9NY47 1150 aa20.53■□□□□ 0.88
USP53-208ENST00000514305 THAP10Q9P2Z0 257 aaPredicted RBP20.53■□□□□ 0.88
USP53-208ENST00000514305 HEY1Q9Y5J3 304 aa20.53■□□□□ 0.88
USP53-208ENST00000514305 OR51B4Q9Y5P0 310 aa20.53■□□□□ 0.88
USP53-208ENST00000514305 APOC4-APOC2K7ER74 178 aa20.52■□□□□ 0.88
USP53-208ENST00000514305 CES2O00748 559 aa20.52■□□□□ 0.88
USP53-208ENST00000514305 CDX4O14627 284 aaPredicted RBP20.52■□□□□ 0.88
USP53-208ENST00000514305 APOC2P02655 101 aa20.52■□□□□ 0.88
USP53-208ENST00000514305 CFIP05156 583 aa20.52■□□□□ 0.88
USP53-208ENST00000514305 KRT10P13645 584 aa20.52■□□□□ 0.88
USP53-208ENST00000514305 PRLRP16471 622 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms