RNA–Protein interactions for RNA: ENST00000513557.5

GYPB-214, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 277 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-214ENST00000513557 RFX6Q8HWS3 928 aa4.32□□□□□ -1.72
GYPB-214ENST00000513557 C16orf71Q8IYS4 520 aaPredicted RBP4.32□□□□□ -1.72
GYPB-214ENST00000513557 NKAIN3Q8N8D7 197 aa4.32□□□□□ -1.72
GYPB-214ENST00000513557 EXD3Q8N9H8 876 aa4.32□□□□□ -1.72
GYPB-214ENST00000513557 FAM110DQ8TAY7 271 aaPredicted RBP4.32□□□□□ -1.72
GYPB-214ENST00000513557 ETNPPLQ8TBG4 499 aa4.32□□□□□ -1.72
GYPB-214ENST00000513557 RAB40AQ8WXH6 277 aa4.32□□□□□ -1.72
GYPB-214ENST00000513557 REPS1Q96D71 796 aa4.32□□□□□ -1.72
GYPB-214ENST00000513557 ZNF764Q96H86 408 aaPredicted RBP4.32□□□□□ -1.72
GYPB-214ENST00000513557 RSRC1Q96IZ7 334 aaKnown RBP4.32□□□□□ -1.72
GYPB-214ENST00000513557 ADAD1Q96M93 576 aaKnown RBP4.32□□□□□ -1.72
GYPB-214ENST00000513557 TOR3AQ9H497 397 aa4.32□□□□□ -1.72
GYPB-214ENST00000513557 CPNE5Q9HCH3 593 aa4.32□□□□□ -1.72
GYPB-214ENST00000513557 ERVK-5Q9HDB9 667 aa4.32□□□□□ -1.72
GYPB-214ENST00000513557 SH3GLB2Q9NR46 395 aa4.32□□□□□ -1.72
GYPB-214ENST00000513557 SMYD2Q9NRG4 433 aa4.32□□□□□ -1.72
GYPB-214ENST00000513557 DIAPH3Q9NSV4 1193 aa4.32□□□□□ -1.72
GYPB-214ENST00000513557 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.32□□□□□ -1.72
GYPB-214ENST00000513557 SH3BP4Q9P0V3 963 aa4.32□□□□□ -1.72
GYPB-214ENST00000513557 HDAC6Q9UBN7 1215 aa4.32□□□□□ -1.72
GYPB-214ENST00000513557 MAFFQ9ULX9 164 aa4.32□□□□□ -1.72
GYPB-214ENST00000513557 GPR34Q9UPC5 381 aa4.32□□□□□ -1.72
GYPB-214ENST00000513557 DTX4Q9Y2E6 619 aa4.32□□□□□ -1.72
GYPB-214ENST00000513557 FRMD4BQ9Y2L6 1034 aa4.32□□□□□ -1.72
GYPB-214ENST00000513557 PIAS3Q9Y6X2 628 aa4.32□□□□□ -1.72
GYPB-214ENST00000513557 SETD1AO15047 1707 aaKnown RBP4.32□□□□□ -1.72
GYPB-214ENST00000513557 TMEM131LA2VDJ0 1609 aa4.32□□□□□ -1.72
GYPB-214ENST00000513557 NKTRP30414 1462 aaKnown RBP4.31□□□□□ -1.72
GYPB-214ENST00000513557 RPRD2Q5VT52 1461 aaKnown RBP4.31□□□□□ -1.72
GYPB-214ENST00000513557 ADAMTS13Q76LX8 1427 aa4.31□□□□□ -1.72
GYPB-214ENST00000513557 PTPRUQ92729 1446 aa4.31□□□□□ -1.72
GYPB-214ENST00000513557 ROCK1Q13464 1354 aa4.31□□□□□ -1.72
GYPB-214ENST00000513557 EMSYQ7Z589 1322 aa4.31□□□□□ -1.72
GYPB-214ENST00000513557 KDM3AQ9Y4C1 1321 aa4.31□□□□□ -1.72
GYPB-214ENST00000513557 TEX13CA0A0J9YWL9 993 aa4.31□□□□□ -1.72
GYPB-214ENST00000513557 MGST3O14880 152 aa4.31□□□□□ -1.72
GYPB-214ENST00000513557 STRNO43815 780 aa4.31□□□□□ -1.72
GYPB-214ENST00000513557 DOK2O60496 412 aa4.31□□□□□ -1.72
GYPB-214ENST00000513557 COX7A2P14406 83 aa4.31□□□□□ -1.72
GYPB-214ENST00000513557 AKR1A1P14550 325 aa4.31□□□□□ -1.72
GYPB-214ENST00000513557 CD72P21854 359 aa4.31□□□□□ -1.72
GYPB-214ENST00000513557 ABCD1P33897 745 aa4.31□□□□□ -1.72
GYPB-214ENST00000513557 IDUAP35475 653 aa4.31□□□□□ -1.72
GYPB-214ENST00000513557 SOX10P56693 466 aa4.31□□□□□ -1.72
GYPB-214ENST00000513557 RPS3AP61247 264 aaKnown RBP4.31□□□□□ -1.72
GYPB-214ENST00000513557 NEXNQ0ZGT2 675 aa4.31□□□□□ -1.72
GYPB-214ENST00000513557 MAMLD1Q13495 774 aa4.31□□□□□ -1.72
GYPB-214ENST00000513557 SLC18A3Q16572 532 aa4.31□□□□□ -1.72
GYPB-214ENST00000513557 ARL13AQ5H913 290 aaPredicted RBP4.31□□□□□ -1.72
GYPB-214ENST00000513557 AADACL2Q6P093 401 aa4.31□□□□□ -1.72
GYPB-214ENST00000513557 CCDC129Q6ZRS4 1044 aa4.31□□□□□ -1.72
GYPB-214ENST00000513557 PXKQ7Z7A4 578 aa4.31□□□□□ -1.72
GYPB-214ENST00000513557 GALNT5Q7Z7M9 940 aa4.31□□□□□ -1.72
GYPB-214ENST00000513557 RHPN2Q8IUC4 686 aa4.31□□□□□ -1.72
GYPB-214ENST00000513557 CNTROBQ8N137 903 aa4.31□□□□□ -1.72
GYPB-214ENST00000513557 ADSSL1Q8N142 457 aa4.31□□□□□ -1.72
GYPB-214ENST00000513557 TTC30BQ8N4P2 665 aa4.31□□□□□ -1.72
GYPB-214ENST00000513557 LSMEM1Q8N8F7 131 aa4.31□□□□□ -1.72
GYPB-214ENST00000513557 CAGE1Q8TC20 777 aa4.31□□□□□ -1.72
GYPB-214ENST00000513557 LRRC59Q96AG4 307 aaKnown RBP4.31□□□□□ -1.72
GYPB-214ENST00000513557 SAAL1Q96ER3 474 aa4.31□□□□□ -1.72
GYPB-214ENST00000513557 NR1H4Q96RI1 486 aaPredicted RBP4.31□□□□□ -1.72
GYPB-214ENST00000513557 ZNF347Q96SE7 839 aa4.31□□□□□ -1.72
GYPB-214ENST00000513557 ZNF747Q9BV97 191 aa4.31□□□□□ -1.72
GYPB-214ENST00000513557 AP1M1Q9BXS5 423 aa4.31□□□□□ -1.72
GYPB-214ENST00000513557 CADM1Q9BY67 442 aaKnown RBP4.31□□□□□ -1.72
GYPB-214ENST00000513557 RANBP17Q9H2T7 1088 aaKnown RBP4.31□□□□□ -1.72
GYPB-214ENST00000513557 PRKRIP1Q9H875 184 aaPredicted RBP4.31□□□□□ -1.72
GYPB-214ENST00000513557 BRF2Q9HAW0 419 aa4.31□□□□□ -1.72
GYPB-214ENST00000513557 TXNRD2Q9NNW7 524 aa4.31□□□□□ -1.72
GYPB-214ENST00000513557 IL17RBQ9NRM6 502 aa4.31□□□□□ -1.72
GYPB-214ENST00000513557 TMEM248Q9NWD8 314 aa4.31□□□□□ -1.72
GYPB-214ENST00000513557 IL1RAPL1Q9NZN1 696 aa4.31□□□□□ -1.72
GYPB-214ENST00000513557 MPP6Q9NZW5 540 aa4.31□□□□□ -1.72
GYPB-214ENST00000513557 SLC17A6Q9P2U8 582 aa4.31□□□□□ -1.72
GYPB-214ENST00000513557 UPB1Q9UBR1 384 aa4.31□□□□□ -1.72
GYPB-214ENST00000513557 TRPM2O94759 1503 aa4.31□□□□□ -1.72
GYPB-214ENST00000513557 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.3□□□□□ -1.72
GYPB-214ENST00000513557 TMEM191CA6NGB0 347 aa4.3□□□□□ -1.72
GYPB-214ENST00000513557 NPIPB15A6NHN6 443 aaPredicted RBP4.3□□□□□ -1.72
GYPB-214ENST00000513557 C17orf100A8MU93 164 aa4.3□□□□□ -1.72
GYPB-214ENST00000513557 TARM1B6A8C7 271 aa4.3□□□□□ -1.72
GYPB-214ENST00000513557 POC1B-GALNT4F8VUJ3 575 aa4.3□□□□□ -1.72
GYPB-214ENST00000513557 AP3D1O14617 1153 aa4.3□□□□□ -1.72
GYPB-214ENST00000513557 CEP104O60308 925 aa4.3□□□□□ -1.72
GYPB-214ENST00000513557 PTP4A3O75365 173 aa4.3□□□□□ -1.72
GYPB-214ENST00000513557 CCNDBP1O95273 360 aa4.3□□□□□ -1.72
GYPB-214ENST00000513557 SGPL1O95470 568 aa4.3□□□□□ -1.72
GYPB-214ENST00000513557 HLA-DQA2P01906 255 aa4.3□□□□□ -1.72
GYPB-214ENST00000513557 CHRM5P08912 532 aaPredicted RBP4.3□□□□□ -1.72
GYPB-214ENST00000513557 SPARCP09486 303 aa4.3□□□□□ -1.72
GYPB-214ENST00000513557 LAMP2P13473 410 aa4.3□□□□□ -1.72
GYPB-214ENST00000513557 RGS2P41220 211 aa4.3□□□□□ -1.72
GYPB-214ENST00000513557 SKIV2L2P42285 1042 aaKnown RBP4.3□□□□□ -1.72
GYPB-214ENST00000513557 CTCFP49711 727 aaPredicted RBP4.3□□□□□ -1.72
GYPB-214ENST00000513557 RARSP54136 660 aaKnown RBP4.3□□□□□ -1.72
GYPB-214ENST00000513557 EIF3BP55884 814 aaKnown RBP4.3□□□□□ -1.72
GYPB-214ENST00000513557 EFNB1P98172 346 aa4.3□□□□□ -1.72
GYPB-214ENST00000513557 SEMA3AQ14563 771 aa4.3□□□□□ -1.72
GYPB-214ENST00000513557 SLC9B1Q4ZJI4 515 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms