RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 PPP1R11O60927 126 aaPredicted RBP11.38□□□□□ -0.59
TCOF1-211ENST00000513346 NDUFS3O75489 264 aa11.38□□□□□ -0.59
TCOF1-211ENST00000513346 KRT6CP48668 564 aa11.38□□□□□ -0.59
TCOF1-211ENST00000513346 CDK9P50750 372 aaKnown RBP11.38□□□□□ -0.59
TCOF1-211ENST00000513346 GTF2BQ00403 316 aa11.38□□□□□ -0.59
TCOF1-211ENST00000513346 POU4F1Q01851 419 aa11.38□□□□□ -0.59
TCOF1-211ENST00000513346 INSCQ1MX18 579 aa11.38□□□□□ -0.59
TCOF1-211ENST00000513346 TATDN1Q6P1N9 297 aa11.38□□□□□ -0.59
TCOF1-211ENST00000513346 ADGRF2Q8IZF7 708 aa11.38□□□□□ -0.59
TCOF1-211ENST00000513346 TNS4Q8IZW8 715 aa11.38□□□□□ -0.59
TCOF1-211ENST00000513346 BPIFB6Q8NFQ5 453 aa11.38□□□□□ -0.59
TCOF1-211ENST00000513346 IL31RAQ8NI17 732 aa11.38□□□□□ -0.59
TCOF1-211ENST00000513346 ITFG1Q8TB96 612 aa11.38□□□□□ -0.59
TCOF1-211ENST00000513346 SH3KBP1Q96B97 665 aa11.38□□□□□ -0.59
TCOF1-211ENST00000513346 TEX12Q9BXU0 123 aa11.38□□□□□ -0.59
TCOF1-211ENST00000513346 WDCPQ9H6R7 721 aa11.38□□□□□ -0.59
TCOF1-211ENST00000513346 WDR55Q9H6Y2 383 aaPredicted RBP11.38□□□□□ -0.59
TCOF1-211ENST00000513346 MOV10Q9HCE1 1003 aaKnown RBP11.38□□□□□ -0.59
TCOF1-211ENST00000513346 MPP6Q9NZW5 540 aa11.38□□□□□ -0.59
TCOF1-211ENST00000513346 PCDHGB4Q9UN71 923 aa11.38□□□□□ -0.59
TCOF1-211ENST00000513346 NALCNQ8IZF0 1738 aa11.38□□□□□ -0.59
TCOF1-211ENST00000513346 MYO1DO94832 1006 aa11.38□□□□□ -0.59
TCOF1-211ENST00000513346 OR6B1O95007 311 aa11.38□□□□□ -0.59
TCOF1-211ENST00000513346 HSMCR30P0CW71 290 aa11.38□□□□□ -0.59
TCOF1-211ENST00000513346 TWF1Q12792 350 aa11.38□□□□□ -0.59
TCOF1-211ENST00000513346 PAGE2BQ5JRK9 111 aa11.38□□□□□ -0.59
TCOF1-211ENST00000513346 CRTC3Q6UUV7 619 aa11.38□□□□□ -0.59
TCOF1-211ENST00000513346 TMEM26Q6ZUK4 368 aa11.38□□□□□ -0.59
TCOF1-211ENST00000513346 ATG16L2Q8NAA4 619 aa11.38□□□□□ -0.59
TCOF1-211ENST00000513346 ADAM7Q9H2U9 754 aa11.38□□□□□ -0.59
TCOF1-211ENST00000513346 TUBGCP4Q9UGJ1 667 aa11.38□□□□□ -0.59
TCOF1-211ENST00000513346 SLC13A4Q9UKG4 626 aa11.38□□□□□ -0.59
TCOF1-211ENST00000513346 PCDHB8Q9UN66 801 aa11.38□□□□□ -0.59
TCOF1-211ENST00000513346 SESN1Q9Y6P5 492 aa11.38□□□□□ -0.59
TCOF1-211ENST00000513346 ITGB5P18084 799 aa11.38□□□□□ -0.59
TCOF1-211ENST00000513346 IFNA8P32881 189 aa11.38□□□□□ -0.59
TCOF1-211ENST00000513346 CD151P48509 253 aa11.38□□□□□ -0.59
TCOF1-211ENST00000513346 NPY2RP49146 381 aa11.38□□□□□ -0.59
TCOF1-211ENST00000513346 DRICH1Q6PGQ1 229 aaPredicted RBP11.38□□□□□ -0.59
TCOF1-211ENST00000513346 CATSPERGQ6ZRH7 1159 aa11.38□□□□□ -0.59
TCOF1-211ENST00000513346 VSIG10LQ86VR7 867 aa11.38□□□□□ -0.59
TCOF1-211ENST00000513346 MIB1Q86YT6 1006 aa11.38□□□□□ -0.59
TCOF1-211ENST00000513346 ZNF276Q8N554 614 aa11.38□□□□□ -0.59
TCOF1-211ENST00000513346 CERS2Q96G23 380 aa11.38□□□□□ -0.59
TCOF1-211ENST00000513346 TMEM176AQ96HP8 235 aa11.38□□□□□ -0.59
TCOF1-211ENST00000513346 HTATIP2Q9BUP3 242 aa11.38□□□□□ -0.59
TCOF1-211ENST00000513346 CYP3A43Q9HB55 503 aa11.38□□□□□ -0.59
TCOF1-211ENST00000513346 KLHL3Q9UH77 587 aa11.38□□□□□ -0.59
TCOF1-211ENST00000513346 A0A1B0GVG6 124 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 TMEM191CA6NGB0 347 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 RNASEH1O60930 286 aaKnown RBP11.37□□□□□ -0.59
TCOF1-211ENST00000513346 PARNO95453 639 aaKnown RBP11.37□□□□□ -0.59
TCOF1-211ENST00000513346 LRG1P02750 347 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 SLC2A3P11169 496 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 AKT1P31749 480 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 BCAT1P54687 386 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 GEMP55040 296 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 FBXO47Q5MNV8 452 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 UBASH3BQ8TF42 649 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 FIG4Q92562 907 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 PROX1Q92786 737 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 ZHX1-C8orf76Q96EF9 292 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 ZBTB45Q96K62 511 aaPredicted RBP11.37□□□□□ -0.59
TCOF1-211ENST00000513346 IKZF4Q9H2S9 585 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 POMKQ9H5K3 350 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 COQ10BQ9H8M1 238 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 RPRD1BQ9NQG5 326 aaKnown RBP11.37□□□□□ -0.59
TCOF1-211ENST00000513346 LIMD1Q9UGP4 676 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 GNPTGQ9UJJ9 305 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 AJAP1Q9UKB5 411 aaPredicted RBP11.37□□□□□ -0.59
TCOF1-211ENST00000513346 ZNF541Q9H0D2 1346 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 HACD1B0YJ81 288 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 ZNF197O14709 1029 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 PMPCBO75439 489 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 CCNKO75909 580 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 TUBP50607 506 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 SLC7A2P52569 658 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 DGKZQ13574 1117 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 DDR2Q16832 855 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 ZBED5Q49AG3 693 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 VWA5B1Q5TIE3 1220 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 LIPMQ5VYY2 423 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 LLGL2Q6P1M3 1020 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 SUN5Q8TC36 379 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 LPGAT1Q92604 370 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 NUAK2Q9H093 628 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 EIF3LQ9Y262 564 aaKnown RBP11.37□□□□□ -0.59
TCOF1-211ENST00000513346 CABYRO75952 493 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 OAS1P00973 400 aaKnown RBP11.37□□□□□ -0.59
TCOF1-211ENST00000513346 SNHG28P0DPA3 235 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 ATP6V1E1P36543 226 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 ADCYAP1R1P41586 468 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 FCHO2Q0JRZ9 810 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 PEX6Q13608 980 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 CCDC142Q17RM4 750 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 ANKRD22Q5VYY1 191 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 UNC5AQ6ZN44 842 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 SZRD1Q7Z422 152 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 STX19Q8N4C7 294 aa11.37□□□□□ -0.59
TCOF1-211ENST00000513346 CNTD1Q8N815 330 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms