RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 MANEALQ5VSG8 457 aa6.63□□□□□ -1.35
KDM3B-208ENST00000512928 AGBL4Q5VU57 503 aa6.63□□□□□ -1.35
KDM3B-208ENST00000512928 PLEKHA7Q6IQ23 1121 aa6.63□□□□□ -1.35
KDM3B-208ENST00000512928 FBXL19Q6PCT2 694 aa6.63□□□□□ -1.35
KDM3B-208ENST00000512928 DPY19L3Q6ZPD9 716 aa6.63□□□□□ -1.35
KDM3B-208ENST00000512928 PRPF39Q86UA1 669 aaKnown RBP6.63□□□□□ -1.35
KDM3B-208ENST00000512928 NLRP14Q86W24 1093 aa6.63□□□□□ -1.35
KDM3B-208ENST00000512928 PCDH20Q8N6Y1 951 aaKnown RBP6.63□□□□□ -1.35
KDM3B-208ENST00000512928 RTL3Q8N8U3 475 aaKnown RBP6.63□□□□□ -1.35
KDM3B-208ENST00000512928 NETO2Q8NC67 525 aa6.63□□□□□ -1.35
KDM3B-208ENST00000512928 SYN2Q92777 582 aaPredicted RBP6.63□□□□□ -1.35
KDM3B-208ENST00000512928 KLK6Q92876 244 aa6.63□□□□□ -1.35
KDM3B-208ENST00000512928 ARHGEF2Q92974 986 aaKnown RBP6.63□□□□□ -1.35
KDM3B-208ENST00000512928 HMCESQ96FZ2 354 aa6.63□□□□□ -1.35
KDM3B-208ENST00000512928 CELF6Q96J87 481 aaKnown RBP6.63□□□□□ -1.35
KDM3B-208ENST00000512928 PCDH15Q96QU1 1955 aa6.63□□□□□ -1.35
KDM3B-208ENST00000512928 DNAJC7Q99615 494 aa6.63□□□□□ -1.35
KDM3B-208ENST00000512928 NCAPGQ9BPX3 1015 aa6.63□□□□□ -1.35
KDM3B-208ENST00000512928 CEP44Q9C0F1 390 aa6.63□□□□□ -1.35
KDM3B-208ENST00000512928 MAGEH1Q9H213 219 aa6.63□□□□□ -1.35
KDM3B-208ENST00000512928 DEF6Q9H4E7 631 aa6.63□□□□□ -1.35
KDM3B-208ENST00000512928 ZWILCHQ9H900 591 aa6.63□□□□□ -1.35
KDM3B-208ENST00000512928 MRPL47Q9HD33 250 aaKnown RBP6.63□□□□□ -1.35
KDM3B-208ENST00000512928 TM7SF3Q9NS93 570 aa6.63□□□□□ -1.35
KDM3B-208ENST00000512928 DNAAF2Q9NVR5 837 aaKnown RBP6.63□□□□□ -1.35
KDM3B-208ENST00000512928 HECAQ9UBI9 543 aaPredicted RBP6.63□□□□□ -1.35
KDM3B-208ENST00000512928 AP4E1Q9UPM8 1137 aa6.63□□□□□ -1.35
KDM3B-208ENST00000512928 BZW2Q9Y6E2 419 aaKnown RBP6.63□□□□□ -1.35
KDM3B-208ENST00000512928 A0A1W2PQU0 124 aa6.62□□□□□ -1.35
KDM3B-208ENST00000512928 TMEM191CA6NGB0 347 aa6.62□□□□□ -1.35
KDM3B-208ENST00000512928 RASA4BC9J798 803 aa6.62□□□□□ -1.35
KDM3B-208ENST00000512928 RNF103O00237 685 aa6.62□□□□□ -1.35
KDM3B-208ENST00000512928 WNT9AO14904 365 aa6.62□□□□□ -1.35
KDM3B-208ENST00000512928 SLC31A1O15431 190 aa6.62□□□□□ -1.35
KDM3B-208ENST00000512928 FGF10O15520 208 aaPredicted RBP6.62□□□□□ -1.35
KDM3B-208ENST00000512928 RASA4O43374 803 aa6.62□□□□□ -1.35
KDM3B-208ENST00000512928 KDELR3O43731 214 aa6.62□□□□□ -1.35
KDM3B-208ENST00000512928 ZMPSTE24O75844 475 aa6.62□□□□□ -1.35
KDM3B-208ENST00000512928 TMCC1O94876 653 aa6.62□□□□□ -1.35
KDM3B-208ENST00000512928 IGSF6O95976 241 aa6.62□□□□□ -1.35
KDM3B-208ENST00000512928 TPM1P09493 284 aa6.62□□□□□ -1.35
KDM3B-208ENST00000512928 GZMAP12544 262 aa6.62□□□□□ -1.35
KDM3B-208ENST00000512928 CD59P13987 128 aa6.62□□□□□ -1.35
KDM3B-208ENST00000512928 CD38P28907 300 aa6.62□□□□□ -1.35
KDM3B-208ENST00000512928 MIPP30301 263 aa6.62□□□□□ -1.35
KDM3B-208ENST00000512928 GKP32189 559 aa6.62□□□□□ -1.35
KDM3B-208ENST00000512928 GJC1P36383 396 aa6.62□□□□□ -1.35
KDM3B-208ENST00000512928 VASPP50552 380 aaPredicted RBP6.62□□□□□ -1.35
KDM3B-208ENST00000512928 CCT8P50990 548 aa6.62□□□□□ -1.35
KDM3B-208ENST00000512928 CCR5P51681 352 aa6.62□□□□□ -1.35
KDM3B-208ENST00000512928 ZNF75DP51815 510 aa6.62□□□□□ -1.35
KDM3B-208ENST00000512928 NEK3P51956 506 aa6.62□□□□□ -1.35
KDM3B-208ENST00000512928 SNRPD1P62314 119 aaKnown RBP6.62□□□□□ -1.35
KDM3B-208ENST00000512928 BNC1Q01954 994 aa6.62□□□□□ -1.35
KDM3B-208ENST00000512928 SLC14A1Q13336 389 aa6.62□□□□□ -1.35
KDM3B-208ENST00000512928 STAT4Q14765 748 aa6.62□□□□□ -1.35
KDM3B-208ENST00000512928 SUZ12Q15022 739 aaKnown RBP6.62□□□□□ -1.35
KDM3B-208ENST00000512928 TRIP6Q15654 476 aaKnown RBP6.62□□□□□ -1.35
KDM3B-208ENST00000512928 CA9Q16790 459 aa6.62□□□□□ -1.35
KDM3B-208ENST00000512928 TSR1Q2NL82 804 aaKnown RBP6.62□□□□□ -1.35
KDM3B-208ENST00000512928 SMTNL2Q2TAL5 461 aa6.62□□□□□ -1.35
KDM3B-208ENST00000512928 PARP15Q460N3 678 aa6.62□□□□□ -1.35
KDM3B-208ENST00000512928 KCNT1Q5JUK3 1230 aa6.62□□□□□ -1.35
KDM3B-208ENST00000512928 PRAMEF14Q5SWL7 426 aa6.62□□□□□ -1.35
KDM3B-208ENST00000512928 CCDC122Q5T0U0 273 aa6.62□□□□□ -1.35
KDM3B-208ENST00000512928 CFAP58Q5T655 872 aa6.62□□□□□ -1.35
KDM3B-208ENST00000512928 ATXN7L2Q5T6C5 722 aaPredicted RBP6.62□□□□□ -1.35
KDM3B-208ENST00000512928 ERMARDQ5T6L9 678 aa6.62□□□□□ -1.35
KDM3B-208ENST00000512928 PIP5KL1Q5T9C9 394 aa6.62□□□□□ -1.35
KDM3B-208ENST00000512928 HGSNATQ68CP4 663 aa6.62□□□□□ -1.35
KDM3B-208ENST00000512928 NAPEPLDQ6IQ20 393 aa6.62□□□□□ -1.35
KDM3B-208ENST00000512928 ERN2Q76MJ5 926 aaKnown RBP6.62□□□□□ -1.35
KDM3B-208ENST00000512928 PNPLA1Q8N8W4 532 aa6.62□□□□□ -1.35
KDM3B-208ENST00000512928 TMIEQ8NEW7 156 aa6.62□□□□□ -1.35
KDM3B-208ENST00000512928 C1orf216Q8TAB5 229 aa6.62□□□□□ -1.35
KDM3B-208ENST00000512928 RHBDD1Q8TEB9 315 aa6.62□□□□□ -1.35
KDM3B-208ENST00000512928 HSPH1Q92598 858 aa6.62□□□□□ -1.35
KDM3B-208ENST00000512928 ARRDC3Q96B67 414 aa6.62□□□□□ -1.35
KDM3B-208ENST00000512928 EXOC2Q96KP1 924 aa6.62□□□□□ -1.35
KDM3B-208ENST00000512928 GDAP1L1Q96MZ0 367 aa6.62□□□□□ -1.35
KDM3B-208ENST00000512928 HEPHQ9BQS7 1158 aa6.62□□□□□ -1.35
KDM3B-208ENST00000512928 SNRNP25Q9BV90 132 aaKnown RBP6.62□□□□□ -1.35
KDM3B-208ENST00000512928 THAP2Q9H0W7 228 aa6.62□□□□□ -1.35
KDM3B-208ENST00000512928 EBF2Q9HAK2 575 aa6.62□□□□□ -1.35
KDM3B-208ENST00000512928 SP110Q9HB58 689 aa6.62□□□□□ -1.35
KDM3B-208ENST00000512928 PREBQ9HCU5 417 aa6.62□□□□□ -1.35
KDM3B-208ENST00000512928 FZD3Q9NPG1 666 aa6.62□□□□□ -1.35
KDM3B-208ENST00000512928 GDF3Q9NR23 364 aa6.62□□□□□ -1.35
KDM3B-208ENST00000512928 ZNHIT6Q9NWK9 470 aaKnown RBP6.62□□□□□ -1.35
KDM3B-208ENST00000512928 ZNF212Q9UDV6 495 aa6.62□□□□□ -1.35
KDM3B-208ENST00000512928 ANAPC7Q9UJX3 599 aa6.62□□□□□ -1.35
KDM3B-208ENST00000512928 CAPN11Q9UMQ6 739 aa6.62□□□□□ -1.35
KDM3B-208ENST00000512928 NEU3Q9UQ49 428 aa6.62□□□□□ -1.35
KDM3B-208ENST00000512928 CA5BQ9Y2D0 317 aa6.62□□□□□ -1.35
KDM3B-208ENST00000512928 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.62□□□□□ -1.35
KDM3B-208ENST00000512928 CNOT1A5YKK6 2376 aaKnown RBP6.62□□□□□ -1.35
KDM3B-208ENST00000512928 CACNA1GO43497 2377 aa6.62□□□□□ -1.35
KDM3B-208ENST00000512928 PLXNA2O75051 1894 aa6.62□□□□□ -1.35
KDM3B-208ENST00000512928 CEP295Q9C0D2 2601 aa6.61□□□□□ -1.35
KDM3B-208ENST00000512928 A0A087X0T9 212 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms