RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 GDAP1Q8TB36 358 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 DEPDC1BQ8WUY9 529 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 SLC44A1Q8WWI5 657 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 STAMBPL1Q96FJ0 436 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 PCED1BQ96HM7 432 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 APOPT1Q96IL0 206 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 ZFP42Q96MM3 310 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 PWWP2AQ96N64 755 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 RAB3IPQ96QF0 476 aaPredicted RBP9.69□□□□□ -0.86
MSH3-203ENST00000512531 VPS13AQ96RL7 3174 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 EBNA1BP2Q99848 306 aaKnown RBP9.69□□□□□ -0.86
MSH3-203ENST00000512531 DHRS4Q9BTZ2 278 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 ULBP1Q9BZM6 244 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 FBXO44Q9H4M3 255 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 FAM96AQ9H5X1 160 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 ARHGEF4Q9NR80 690 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 SLC2A4RGQ9NR83 387 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 ABCC13Q9NSE7 274 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 TXLNGQ9NUQ3 528 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 DDIT4Q9NX09 232 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 ZDHHC7Q9NXF8 308 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 NSMCE4AQ9NXX6 385 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 EURLQ9NYK6 297 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 FNIP2Q9P278 1114 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 KLHL8Q9P2G9 620 aaPredicted RBP9.69□□□□□ -0.86
MSH3-203ENST00000512531 INPP5FQ9Y2H2 1132 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 USH1CQ9Y6N9 552 aa9.69□□□□□ -0.86
MSH3-203ENST00000512531 SYNJ2BP-COX16A0A087WUM0 186 aa9.68□□□□□ -0.86
MSH3-203ENST00000512531 CCDC195A0A1B0GUA6 201 aa9.68□□□□□ -0.86
MSH3-203ENST00000512531 TCRBV9S1A1TA0A576 114 aa9.68□□□□□ -0.86
MSH3-203ENST00000512531 CASTOR2A6NHX0 329 aa9.68□□□□□ -0.86
MSH3-203ENST00000512531 M0QZQ0 153 aa9.68□□□□□ -0.86
MSH3-203ENST00000512531 TEX28O15482 410 aa9.68□□□□□ -0.86
MSH3-203ENST00000512531 PI15O43692 258 aa9.68□□□□□ -0.86
MSH3-203ENST00000512531 B4GALT3O60512 393 aa9.68□□□□□ -0.86
MSH3-203ENST00000512531 TMEM63AO94886 807 aa9.68□□□□□ -0.86
MSH3-203ENST00000512531 ASMTLO95671 621 aa9.68□□□□□ -0.86
MSH3-203ENST00000512531 LMNAP02545 664 aaKnown RBP9.68□□□□□ -0.86
MSH3-203ENST00000512531 POLBP06746 335 aa9.68□□□□□ -0.86
MSH3-203ENST00000512531 GOT1P17174 413 aa9.68□□□□□ -0.86
MSH3-203ENST00000512531 PGAM1P18669 254 aa9.68□□□□□ -0.86
MSH3-203ENST00000512531 AMPD1P23109 780 aa9.68□□□□□ -0.86
MSH3-203ENST00000512531 ACAT1P24752 427 aaKnown RBP9.68□□□□□ -0.86
MSH3-203ENST00000512531 LIG3P49916 1009 aa9.68□□□□□ -0.86
MSH3-203ENST00000512531 RACK1P63244 317 aaKnown RBP9.68□□□□□ -0.86
MSH3-203ENST00000512531 RELBQ01201 579 aa9.68□□□□□ -0.86
MSH3-203ENST00000512531 ELAVL2Q12926 359 aaKnown RBP9.68□□□□□ -0.86
MSH3-203ENST00000512531 LRRC14Q15048 493 aa9.68□□□□□ -0.86
MSH3-203ENST00000512531 PRKD1Q15139 912 aaPredicted RBP9.68□□□□□ -0.86
MSH3-203ENST00000512531 SPANXN3Q5MJ09 141 aa9.68□□□□□ -0.86
MSH3-203ENST00000512531 SPDYAQ5MJ70 313 aa9.68□□□□□ -0.86
MSH3-203ENST00000512531 ANKRD22Q5VYY1 191 aa9.68□□□□□ -0.86
MSH3-203ENST00000512531 TIGD7Q6NT04 549 aaPredicted RBP9.68□□□□□ -0.86
MSH3-203ENST00000512531 TRNP1Q6NT89 227 aa9.68□□□□□ -0.86
MSH3-203ENST00000512531 ZC3H14Q6PJT7 736 aaKnown RBP9.68□□□□□ -0.86
MSH3-203ENST00000512531 PRUNE1Q86TP1 453 aa9.68□□□□□ -0.86
MSH3-203ENST00000512531 SLC44A3Q8N4M1 653 aa9.68□□□□□ -0.86
MSH3-203ENST00000512531 CCDC185Q8N715 623 aa9.68□□□□□ -0.86
MSH3-203ENST00000512531 RAB3IL1Q8TBN0 382 aa9.68□□□□□ -0.86
MSH3-203ENST00000512531 CCDC110Q8TBZ0 833 aa9.68□□□□□ -0.86
MSH3-203ENST00000512531 ACMSDQ8TDX5 336 aa9.68□□□□□ -0.86
MSH3-203ENST00000512531 MYLPFQ96A32 169 aa9.68□□□□□ -0.86
MSH3-203ENST00000512531 TTC17Q96AE7 1141 aa9.68□□□□□ -0.86
MSH3-203ENST00000512531 FUBP3Q96I24 572 aaKnown RBP eCLIP9.68□□□□□ -0.86
MSH3-203ENST00000512531 PIWIL1Q96J94 861 aaKnown RBP9.68□□□□□ -0.86
MSH3-203ENST00000512531 SUSD3Q96L08 255 aa9.68□□□□□ -0.86
MSH3-203ENST00000512531 TSNARE1Q96NA8 513 aa9.68□□□□□ -0.86
MSH3-203ENST00000512531 OLFM3Q96PB7 478 aa9.68□□□□□ -0.86
MSH3-203ENST00000512531 CSNK1G1Q9HCP0 422 aa9.68□□□□□ -0.86
MSH3-203ENST00000512531 MAN1C1Q9NR34 630 aa9.68□□□□□ -0.86
MSH3-203ENST00000512531 DTLQ9NZJ0 730 aa9.68□□□□□ -0.86
MSH3-203ENST00000512531 BFARQ9NZS9 450 aa9.68□□□□□ -0.86
MSH3-203ENST00000512531 COX16Q9P0S2 106 aa9.68□□□□□ -0.86
MSH3-203ENST00000512531 CTNNAL1Q9UBT7 734 aa9.68□□□□□ -0.86
MSH3-203ENST00000512531 MID2Q9UJV3 735 aa9.68□□□□□ -0.86
MSH3-203ENST00000512531 FBXW11Q9UKB1 542 aa9.68□□□□□ -0.86
MSH3-203ENST00000512531 AAR2Q9Y312 384 aaKnown RBP9.68□□□□□ -0.86
MSH3-203ENST00000512531 AK5Q9Y6K8 562 aa9.68□□□□□ -0.86
MSH3-203ENST00000512531 OTOGLQ3ZCN5 2332 aa9.67□□□□□ -0.86
MSH3-203ENST00000512531 DOCK8Q8NF50 2099 aa9.67□□□□□ -0.86
MSH3-203ENST00000512531 C2orf16Q68DN1 1984 aa9.67□□□□□ -0.86
MSH3-203ENST00000512531 MTCL1Q9Y4B5 1905 aaKnown RBP9.67□□□□□ -0.86
MSH3-203ENST00000512531 ANHXE9PGG2 379 aa9.67□□□□□ -0.86
MSH3-203ENST00000512531 TMEM189-UBE2V1I3L0A0 370 aa9.67□□□□□ -0.86
MSH3-203ENST00000512531 RNF103O00237 685 aa9.67□□□□□ -0.86
MSH3-203ENST00000512531 CLDN5O00501 218 aa9.67□□□□□ -0.86
MSH3-203ENST00000512531 SYN3O14994 580 aa9.67□□□□□ -0.86
MSH3-203ENST00000512531 DNAJC8O75937 253 aaPredicted RBP9.67□□□□□ -0.86
MSH3-203ENST00000512531 FAM155BO75949 473 aa9.67□□□□□ -0.86
MSH3-203ENST00000512531 ZIC2O95409 532 aaPredicted RBP9.67□□□□□ -0.86
MSH3-203ENST00000512531 PRKCHP24723 683 aa9.67□□□□□ -0.86
MSH3-203ENST00000512531 GRNP28799 593 aaKnown RBP9.67□□□□□ -0.86
MSH3-203ENST00000512531 TKTP29401 623 aaKnown RBP9.67□□□□□ -0.86
MSH3-203ENST00000512531 CCR1P32246 355 aa9.67□□□□□ -0.86
MSH3-203ENST00000512531 GRIK1P39086 918 aa9.67□□□□□ -0.86
MSH3-203ENST00000512531 HADHAP40939 763 aa9.67□□□□□ -0.86
MSH3-203ENST00000512531 SLC19A1P41440 591 aa9.67□□□□□ -0.86
MSH3-203ENST00000512531 SKIV2L2P42285 1042 aaKnown RBP9.67□□□□□ -0.86
MSH3-203ENST00000512531 GPX6P59796 221 aa9.67□□□□□ -0.86
MSH3-203ENST00000512531 GBE1Q04446 702 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms