RNA–Protein interactions for RNA: ENST00000512094.5

NPHP3-210, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-210ENST00000512094 RINT1Q6NUQ1 792 aa4.38□□□□□ -1.71
NPHP3-210ENST00000512094 TRIM74Q86UV6 250 aa4.38□□□□□ -1.71
NPHP3-210ENST00000512094 TRIM73Q86UV7 250 aa4.38□□□□□ -1.71
NPHP3-210ENST00000512094 RBFAQ8N0V3 343 aa4.38□□□□□ -1.71
NPHP3-210ENST00000512094 ZNF441Q8N8Z8 693 aa4.38□□□□□ -1.71
NPHP3-210ENST00000512094 TAS1R2Q8TE23 839 aa4.38□□□□□ -1.71
NPHP3-210ENST00000512094 NPFFR1Q9GZQ6 430 aa4.38□□□□□ -1.71
NPHP3-210ENST00000512094 MBD3L5A6NJ08 208 aaPredicted RBP4.37□□□□□ -1.71
NPHP3-210ENST00000512094 SLC38A8A6NNN8 435 aa4.37□□□□□ -1.71
NPHP3-210ENST00000512094 SSTR2P30874 369 aa4.37□□□□□ -1.71
NPHP3-210ENST00000512094 TIMP3P35625 211 aa4.37□□□□□ -1.71
NPHP3-210ENST00000512094 ADORA2A-AS1P86434 159 aa4.37□□□□□ -1.71
NPHP3-210ENST00000512094 CYP4A11Q02928 519 aa4.37□□□□□ -1.71
NPHP3-210ENST00000512094 SF3A3Q12874 501 aaKnown RBP eCLIP4.37□□□□□ -1.71
NPHP3-210ENST00000512094 ZBTB17Q13105 803 aa4.37□□□□□ -1.71
NPHP3-210ENST00000512094 ARL13BQ3SXY8 428 aa4.37□□□□□ -1.71
NPHP3-210ENST00000512094 ARL6IP4Q66PJ3 421 aaKnown RBP4.37□□□□□ -1.71
NPHP3-210ENST00000512094 C19orf48Q6RUI8 117 aa4.37□□□□□ -1.71
NPHP3-210ENST00000512094 RNF144BQ7Z419 303 aa4.37□□□□□ -1.71
NPHP3-210ENST00000512094 WDR5BQ86VZ2 330 aa4.37□□□□□ -1.71
NPHP3-210ENST00000512094 CIARTQ8N365 385 aaPredicted RBP4.37□□□□□ -1.71
NPHP3-210ENST00000512094 ZNF501Q96CX3 271 aaPredicted RBP4.37□□□□□ -1.71
NPHP3-210ENST00000512094 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.37□□□□□ -1.71
NPHP3-210ENST00000512094 TMEM51Q9NW97 253 aa4.37□□□□□ -1.71
NPHP3-210ENST00000512094 LRFN1Q9P244 771 aa4.37□□□□□ -1.71
NPHP3-210ENST00000512094 PHTF1Q9UMS5 762 aa4.37□□□□□ -1.71
NPHP3-210ENST00000512094 AGAP5A6NIR3 686 aa4.36□□□□□ -1.71
NPHP3-210ENST00000512094 ZNF500O60304 480 aaPredicted RBP4.36□□□□□ -1.71
NPHP3-210ENST00000512094 DDAH2O95865 285 aa4.36□□□□□ -1.71
NPHP3-210ENST00000512094 CETPP11597 493 aa4.36□□□□□ -1.71
NPHP3-210ENST00000512094 HARSP12081 509 aaKnown RBP4.36□□□□□ -1.71
NPHP3-210ENST00000512094 NR0B1P51843 470 aaKnown RBP4.36□□□□□ -1.71
NPHP3-210ENST00000512094 RCAN1P53805 252 aa4.36□□□□□ -1.71
NPHP3-210ENST00000512094 ALDH18A1P54886 795 aaKnown RBP4.36□□□□□ -1.71
NPHP3-210ENST00000512094 PMS2P11Q13670 270 aa4.36□□□□□ -1.71
NPHP3-210ENST00000512094 KIAA1324Q6UXG2 1013 aaKnown RBP4.36□□□□□ -1.71
NPHP3-210ENST00000512094 NEK10Q6ZWH5 1172 aa4.36□□□□□ -1.71
NPHP3-210ENST00000512094 VPS52Q8N1B4 723 aa4.36□□□□□ -1.71
NPHP3-210ENST00000512094 MSTO1Q9BUK6 570 aa4.36□□□□□ -1.71
NPHP3-210ENST00000512094 BARHL1Q9BZE3 327 aa4.36□□□□□ -1.71
NPHP3-210ENST00000512094 OSGIN2Q9Y236 505 aa4.36□□□□□ -1.71
NPHP3-210ENST00000512094 GSTM2P28161 218 aa4.35□□□□□ -1.71
NPHP3-210ENST00000512094 MTFR2Q6P444 385 aa4.35□□□□□ -1.71
NPHP3-210ENST00000512094 STT3BQ8TCJ2 826 aa4.35□□□□□ -1.71
NPHP3-210ENST00000512094 NECTIN3Q9NQS3 549 aa4.35□□□□□ -1.71
NPHP3-210ENST00000512094 KIF1CO43896 1103 aaKnown RBP4.34□□□□□ -1.71
NPHP3-210ENST00000512094 KDM4BO94953 1096 aa4.34□□□□□ -1.71
NPHP3-210ENST00000512094 ZNF10P21506 573 aaPredicted RBP4.34□□□□□ -1.71
NPHP3-210ENST00000512094 MARK3P27448 753 aa4.34□□□□□ -1.71
NPHP3-210ENST00000512094 DPP6P42658 865 aa4.34□□□□□ -1.71
NPHP3-210ENST00000512094 PRIM2P49643 509 aa4.34□□□□□ -1.71
NPHP3-210ENST00000512094 SLC35G1Q2M3R5 365 aa4.34□□□□□ -1.71
NPHP3-210ENST00000512094 TMEM30BQ3MIR4 351 aa4.34□□□□□ -1.71
NPHP3-210ENST00000512094 FAM69BQ5VUD6 431 aa4.34□□□□□ -1.71
NPHP3-210ENST00000512094 GRAPLQ8TC17 118 aaPredicted RBP4.34□□□□□ -1.71
NPHP3-210ENST00000512094 NPAS1Q99742 590 aa4.34□□□□□ -1.71
NPHP3-210ENST00000512094 DCTN5Q9BTE1 182 aa4.34□□□□□ -1.71
NPHP3-210ENST00000512094 DDX23Q9BUQ8 820 aaKnown RBP4.34□□□□□ -1.71
NPHP3-210ENST00000512094 MOV10L1Q9BXT6 1211 aaKnown RBP4.34□□□□□ -1.71
NPHP3-210ENST00000512094 TRIM31Q9BZY9 425 aa4.34□□□□□ -1.71
NPHP3-210ENST00000512094 PTPRHQ9HD43 1115 aa4.34□□□□□ -1.71
NPHP3-210ENST00000512094 SMARCAL1Q9NZC9 954 aa4.34□□□□□ -1.71
NPHP3-210ENST00000512094 GOLGA6CA6NDK9 693 aa4.33□□□□□ -1.72
NPHP3-210ENST00000512094 GOLGA6BA6NDN3 693 aa4.33□□□□□ -1.72
NPHP3-210ENST00000512094 C16orf97H3BN30 126 aa4.33□□□□□ -1.72
NPHP3-210ENST00000512094 CHL1O00533 1208 aa4.33□□□□□ -1.72
NPHP3-210ENST00000512094 LARGE1O95461 756 aa4.33□□□□□ -1.72
NPHP3-210ENST00000512094 GOLGA6DP0CG33 693 aa4.33□□□□□ -1.72
NPHP3-210ENST00000512094 SLC5A1P13866 664 aa4.33□□□□□ -1.72
NPHP3-210ENST00000512094 ALDH4A1P30038 563 aa4.33□□□□□ -1.72
NPHP3-210ENST00000512094 HSD17B4P51659 736 aa4.33□□□□□ -1.72
NPHP3-210ENST00000512094 GFOD2Q3B7J2 385 aa4.33□□□□□ -1.72
NPHP3-210ENST00000512094 TMEM268Q5VZI3 342 aa4.33□□□□□ -1.72
NPHP3-210ENST00000512094 BSPRYQ5W0U4 402 aa4.33□□□□□ -1.72
NPHP3-210ENST00000512094 NCAPH2Q6IBW4 605 aa4.33□□□□□ -1.72
NPHP3-210ENST00000512094 HIBCHQ6NVY1 386 aaPredicted RBP4.33□□□□□ -1.72
NPHP3-210ENST00000512094 ARHGAP11AQ6P4F7 1023 aa4.33□□□□□ -1.72
NPHP3-210ENST00000512094 ZNF497Q6ZNH5 498 aa4.33□□□□□ -1.72
NPHP3-210ENST00000512094 SFR1Q86XK3 245 aa4.33□□□□□ -1.72
NPHP3-210ENST00000512094 NRSN1Q8IZ57 195 aa4.33□□□□□ -1.72
NPHP3-210ENST00000512094 OR13A1Q8NGR1 328 aa4.33□□□□□ -1.72
NPHP3-210ENST00000512094 LRRC4Q9HBW1 653 aa4.33□□□□□ -1.72
NPHP3-210ENST00000512094 FBRSL1Q9HCM7 1045 aaKnown RBP4.33□□□□□ -1.72
NPHP3-210ENST00000512094 PDE11AQ9HCR9 933 aa4.33□□□□□ -1.72
NPHP3-210ENST00000512094 OBP2AQ9NY56 170 aa4.33□□□□□ -1.72
NPHP3-210ENST00000512094 GOLGA6AQ9NYA3 693 aa4.33□□□□□ -1.72
NPHP3-210ENST00000512094 HERC5Q9UII4 1024 aaKnown RBP4.33□□□□□ -1.72
NPHP3-210ENST00000512094 PAM16Q9Y3D7 125 aa4.33□□□□□ -1.72
NPHP3-210ENST00000512094 NOTCH2Q04721 2471 aa4.32□□□□□ -1.72
NPHP3-210ENST00000512094 SYT5O00445 386 aa4.32□□□□□ -1.72
NPHP3-210ENST00000512094 VNN2O95498 520 aa4.32□□□□□ -1.72
NPHP3-210ENST00000512094 DCTDP32321 178 aa4.32□□□□□ -1.72
NPHP3-210ENST00000512094 LINC01547P58512 204 aaPredicted RBP4.32□□□□□ -1.72
NPHP3-210ENST00000512094 RAB30Q15771 203 aa4.32□□□□□ -1.72
NPHP3-210ENST00000512094 GXYLT1Q4G148 440 aa4.32□□□□□ -1.72
NPHP3-210ENST00000512094 KLHL24Q6TFL4 600 aa4.32□□□□□ -1.72
NPHP3-210ENST00000512094 TMC8Q8IU68 726 aa4.32□□□□□ -1.72
NPHP3-210ENST00000512094 SPAG16Q8N0X2 631 aa4.32□□□□□ -1.72
NPHP3-210ENST00000512094 AADATQ8N5Z0 425 aa4.32□□□□□ -1.72
NPHP3-210ENST00000512094 MAPK1IP1LQ8NDC0 245 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms