RNA–Protein interactions for RNA: ENST00000511667.5

CLDND1-224, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-224ENST00000511667 WASF2Q9Y6W5 498 aa13.77□□□□□ -0.21
CLDND1-224ENST00000511667 ARID1BQ8NFD5 2236 aaPredicted RBP13.76□□□□□ -0.21
CLDND1-224ENST00000511667 TMEM191CA6NGB0 347 aa13.76□□□□□ -0.21
CLDND1-224ENST00000511667 CAPN8A6NHC0 703 aa13.76□□□□□ -0.21
CLDND1-224ENST00000511667 WNT9AO14904 365 aa13.76□□□□□ -0.21
CLDND1-224ENST00000511667 IL1BP01584 269 aa13.76□□□□□ -0.21
CLDND1-224ENST00000511667 WNT1P04628 370 aa13.76□□□□□ -0.21
CLDND1-224ENST00000511667 PPP2CBP62714 309 aa13.76□□□□□ -0.21
CLDND1-224ENST00000511667 PPP2CAP67775 309 aa13.76□□□□□ -0.21
CLDND1-224ENST00000511667 CNTN1Q12860 1018 aa13.76□□□□□ -0.21
CLDND1-224ENST00000511667 FILIP1LQ4L180 1135 aa13.76□□□□□ -0.21
CLDND1-224ENST00000511667 FAM46CQ5VWP2 391 aa13.76□□□□□ -0.21
CLDND1-224ENST00000511667 DNAJC24Q6P3W2 148 aa13.76□□□□□ -0.21
CLDND1-224ENST00000511667 C22orf39Q6P5X5 142 aa13.76□□□□□ -0.21
CLDND1-224ENST00000511667 SLFN11Q7Z7L1 901 aa13.76□□□□□ -0.21
CLDND1-224ENST00000511667 LUZP1Q86V48 1076 aa13.76□□□□□ -0.21
CLDND1-224ENST00000511667 PIP4K2CQ8TBX8 421 aa13.76□□□□□ -0.21
CLDND1-224ENST00000511667 MCEEQ96PE7 176 aa13.76□□□□□ -0.21
CLDND1-224ENST00000511667 OMDQ99983 421 aa13.76□□□□□ -0.21
CLDND1-224ENST00000511667 ISCUQ9H1K1 167 aa13.76□□□□□ -0.21
CLDND1-224ENST00000511667 MIR1-1HGQ9H1L0 117 aa13.76□□□□□ -0.21
CLDND1-224ENST00000511667 MAGEH1Q9H213 219 aa13.76□□□□□ -0.21
CLDND1-224ENST00000511667 ANKRD6Q9Y2G4 727 aa13.76□□□□□ -0.21
CLDND1-224ENST00000511667 TP53BP1Q12888 1972 aaPredicted RBP13.76□□□□□ -0.21
CLDND1-224ENST00000511667 PCDHGA12O60330 932 aa13.75□□□□□ -0.21
CLDND1-224ENST00000511667 RTN2O75298 545 aa13.75□□□□□ -0.21
CLDND1-224ENST00000511667 FSBPO95073 299 aa13.75□□□□□ -0.21
CLDND1-224ENST00000511667 CER1O95813 267 aa13.75□□□□□ -0.21
CLDND1-224ENST00000511667 CHRNA3P32297 505 aa13.75□□□□□ -0.21
CLDND1-224ENST00000511667 HTR7P34969 479 aa13.75□□□□□ -0.21
CLDND1-224ENST00000511667 NUDT1P36639 197 aa13.75□□□□□ -0.21
CLDND1-224ENST00000511667 ACVRL1P37023 503 aa13.75□□□□□ -0.21
CLDND1-224ENST00000511667 ETFBP38117 255 aa13.75□□□□□ -0.21
CLDND1-224ENST00000511667 FANCCQ00597 558 aa13.75□□□□□ -0.21
CLDND1-224ENST00000511667 RETSATQ6NUM9 610 aa13.75□□□□□ -0.21
CLDND1-224ENST00000511667 NEK5Q6P3R8 708 aa13.75□□□□□ -0.21
CLDND1-224ENST00000511667 LINGO4Q6UY18 593 aa13.75□□□□□ -0.21
CLDND1-224ENST00000511667 DPY19L3Q6ZPD9 716 aa13.75□□□□□ -0.21
CLDND1-224ENST00000511667 PYROXD2Q8N2H3 581 aa13.75□□□□□ -0.21
CLDND1-224ENST00000511667 PCDH20Q8N6Y1 951 aaKnown RBP13.75□□□□□ -0.21
CLDND1-224ENST00000511667 RTL3Q8N8U3 475 aaKnown RBP13.75□□□□□ -0.21
CLDND1-224ENST00000511667 ATP11CQ8NB49 1132 aa13.75□□□□□ -0.21
CLDND1-224ENST00000511667 CHST14Q8NCH0 376 aa13.75□□□□□ -0.21
CLDND1-224ENST00000511667 ARRDC3Q96B67 414 aa13.75□□□□□ -0.21
CLDND1-224ENST00000511667 TBC1D31Q96DN5 1066 aa13.75□□□□□ -0.21
CLDND1-224ENST00000511667 HDAC8Q9BY41 377 aa13.75□□□□□ -0.21
CLDND1-224ENST00000511667 CLMPQ9H6B4 373 aa13.75□□□□□ -0.21
CLDND1-224ENST00000511667 GAREM1Q9H706 876 aa13.75□□□□□ -0.21
CLDND1-224ENST00000511667 PREBQ9HCU5 417 aa13.75□□□□□ -0.21
CLDND1-224ENST00000511667 PCOLCE2Q9UKZ9 415 aa13.75□□□□□ -0.21
CLDND1-224ENST00000511667 NENFQ9UMX5 172 aa13.75□□□□□ -0.21
CLDND1-224ENST00000511667 SNX11Q9Y5W9 270 aa13.75□□□□□ -0.21
CLDND1-224ENST00000511667 GOLGA4Q13439 2230 aaKnown RBP13.75□□□□□ -0.21
CLDND1-224ENST00000511667 EIF3CLB5ME19 914 aaKnown RBP13.74□□□□□ -0.21
CLDND1-224ENST00000511667 C1QTNF3-AMACRE9PGA6 284 aa13.74□□□□□ -0.21
CLDND1-224ENST00000511667 PLK4O00444 970 aa13.74□□□□□ -0.21
CLDND1-224ENST00000511667 SH3BP5O60239 455 aa13.74□□□□□ -0.21
CLDND1-224ENST00000511667 TNFAIP3P21580 790 aa13.74□□□□□ -0.21
CLDND1-224ENST00000511667 SHBQ15464 509 aa13.74□□□□□ -0.21
CLDND1-224ENST00000511667 TEAD4Q15561 434 aa13.74□□□□□ -0.21
CLDND1-224ENST00000511667 ASIC2Q16515 512 aa13.74□□□□□ -0.21
CLDND1-224ENST00000511667 ACCSLQ4AC99 568 aa13.74□□□□□ -0.21
CLDND1-224ENST00000511667 SFMBT2Q5VUG0 894 aa13.74□□□□□ -0.21
CLDND1-224ENST00000511667 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.74□□□□□ -0.21
CLDND1-224ENST00000511667 NAXDQ8IW45 347 aa13.74□□□□□ -0.21
CLDND1-224ENST00000511667 DRC7Q8IY82 874 aa13.74□□□□□ -0.21
CLDND1-224ENST00000511667 UMODL1-AS1Q8N2C9 162 aa13.74□□□□□ -0.21
CLDND1-224ENST00000511667 OR14C36Q8NHC7 312 aa13.74□□□□□ -0.21
CLDND1-224ENST00000511667 SLC6A18Q96N87 628 aa13.74□□□□□ -0.21
CLDND1-224ENST00000511667 CAMK1GQ96NX5 476 aa13.74□□□□□ -0.21
CLDND1-224ENST00000511667 EIF3CQ99613 913 aaKnown RBP13.74□□□□□ -0.21
CLDND1-224ENST00000511667 KLC2Q9H0B6 622 aa13.74□□□□□ -0.21
CLDND1-224ENST00000511667 ATP13A1Q9HD20 1204 aa13.74□□□□□ -0.21
CLDND1-224ENST00000511667 TM7SF3Q9NS93 570 aa13.74□□□□□ -0.21
CLDND1-224ENST00000511667 PARVAQ9NVD7 372 aa13.74□□□□□ -0.21
CLDND1-224ENST00000511667 DMTF1Q9Y222 760 aa13.74□□□□□ -0.21
CLDND1-224ENST00000511667 PTPRBP23467 1997 aa13.74□□□□□ -0.21
CLDND1-224ENST00000511667 USP9XQ93008 2570 aaPredicted RBP13.74□□□□□ -0.21
CLDND1-224ENST00000511667 COL5A1P20908 1838 aaPredicted RBP13.74□□□□□ -0.21
CLDND1-224ENST00000511667 CBX4O00257 560 aa13.73□□□□□ -0.21
CLDND1-224ENST00000511667 KDELR3O43731 214 aa13.73□□□□□ -0.21
CLDND1-224ENST00000511667 DFNA5O60443 496 aa13.73□□□□□ -0.21
CLDND1-224ENST00000511667 FTLP02792 175 aaPredicted RBP13.73□□□□□ -0.21
CLDND1-224ENST00000511667 PRNPP04156 253 aa13.73□□□□□ -0.21
CLDND1-224ENST00000511667 PTMSP20962 102 aa13.73□□□□□ -0.21
CLDND1-224ENST00000511667 HNRNPH3P31942 346 aaKnown RBP13.73□□□□□ -0.21
CLDND1-224ENST00000511667 YBEYP58557 167 aaPredicted RBP13.73□□□□□ -0.21
CLDND1-224ENST00000511667 CYP4F3Q08477 520 aa13.73□□□□□ -0.21
CLDND1-224ENST00000511667 ZSCAN23Q3MJ62 389 aa13.73□□□□□ -0.21
CLDND1-224ENST00000511667 TMEM259Q4ZIN3 620 aa13.73□□□□□ -0.21
CLDND1-224ENST00000511667 AFMIDQ63HM1 303 aa13.73□□□□□ -0.21
CLDND1-224ENST00000511667 NAPEPLDQ6IQ20 393 aa13.73□□□□□ -0.21
CLDND1-224ENST00000511667 LAYNQ6UX15 382 aa13.73□□□□□ -0.21
CLDND1-224ENST00000511667 TMC6Q7Z403 805 aa13.73□□□□□ -0.21
CLDND1-224ENST00000511667 IQCHQ86VS3 1027 aa13.73□□□□□ -0.21
CLDND1-224ENST00000511667 TMEM145Q8NBT3 493 aa13.73□□□□□ -0.21
CLDND1-224ENST00000511667 GANCQ8TET4 914 aa13.73□□□□□ -0.21
CLDND1-224ENST00000511667 IQCDQ96DY2 449 aa13.73□□□□□ -0.21
CLDND1-224ENST00000511667 CCDC114Q96M63 670 aa13.73□□□□□ -0.21
CLDND1-224ENST00000511667 PEBP4Q96S96 227 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms