RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 TTLL3Q9Y4R7 772 aa15.44■□□□□ 0.06
SCLT1-209ENST00000511426 ARIH1Q9Y4X5 557 aaPredicted RBP15.44■□□□□ 0.06
SCLT1-209ENST00000511426 OR51B4Q9Y5P0 310 aa15.44■□□□□ 0.06
SCLT1-209ENST00000511426 IKBKGQ9Y6K9 419 aa15.44■□□□□ 0.06
SCLT1-209ENST00000511426 CNTFP26441 200 aa15.44■□□□□ 0.06
SCLT1-209ENST00000511426 MGAT1P26572 445 aa15.44■□□□□ 0.06
SCLT1-209ENST00000511426 MSH2P43246 934 aa15.44■□□□□ 0.06
SCLT1-209ENST00000511426 SESN2P58004 480 aaPredicted RBP15.44■□□□□ 0.06
SCLT1-209ENST00000511426 MAGOHP61326 146 aaKnown RBP15.44■□□□□ 0.06
SCLT1-209ENST00000511426 PPP2R2AP63151 447 aa15.44■□□□□ 0.06
SCLT1-209ENST00000511426 NSUN2Q08J23 767 aaKnown RBP eCLIP15.44■□□□□ 0.06
SCLT1-209ENST00000511426 COL13A1Q5TAT6 717 aaPredicted RBP15.44■□□□□ 0.06
SCLT1-209ENST00000511426 LGSNQ5TDP6 509 aa15.44■□□□□ 0.06
SCLT1-209ENST00000511426 RNF219Q5W0B1 726 aaPredicted RBP15.44■□□□□ 0.06
SCLT1-209ENST00000511426 KCTD16Q68DU8 428 aa15.44■□□□□ 0.06
SCLT1-209ENST00000511426 RETSATQ6NUM9 610 aa15.44■□□□□ 0.06
SCLT1-209ENST00000511426 CASC4Q6P4E1 433 aa15.44■□□□□ 0.06
SCLT1-209ENST00000511426 KDELC1Q6UW63 502 aa15.44■□□□□ 0.06
SCLT1-209ENST00000511426 RBM23Q86U06 439 aaKnown RBP15.44■□□□□ 0.06
SCLT1-209ENST00000511426 CARNMT1Q8N4J0 409 aa15.44■□□□□ 0.06
SCLT1-209ENST00000511426 CELF5Q8N6W0 485 aaKnown RBP15.44■□□□□ 0.06
SCLT1-209ENST00000511426 ARRDC2Q8TBH0 407 aa15.44■□□□□ 0.06
SCLT1-209ENST00000511426 SLC44A1Q8WWI5 657 aa15.44■□□□□ 0.06
SCLT1-209ENST00000511426 PAFAH2Q99487 392 aa15.44■□□□□ 0.06
SCLT1-209ENST00000511426 FEM1AQ9BSK4 669 aa15.44■□□□□ 0.06
SCLT1-209ENST00000511426 SPON2Q9BUD6 331 aa15.44■□□□□ 0.06
SCLT1-209ENST00000511426 OBP2AQ9NY56 170 aa15.44■□□□□ 0.06
SCLT1-209ENST00000511426 MARK1Q9P0L2 795 aa15.44■□□□□ 0.06
SCLT1-209ENST00000511426 SOX13Q9UN79 622 aa15.44■□□□□ 0.06
SCLT1-209ENST00000511426 NUP205Q92621 2012 aa15.43■□□□□ 0.06
SCLT1-209ENST00000511426 IQANK1A0A1B0GTG1 560 aa15.43■□□□□ 0.06
SCLT1-209ENST00000511426 FAM159BA6NKW6 160 aa15.43■□□□□ 0.06
SCLT1-209ENST00000511426 PENKP01210 267 aaPredicted RBP15.43■□□□□ 0.06
SCLT1-209ENST00000511426 INHBAP08476 426 aa15.43■□□□□ 0.06
SCLT1-209ENST00000511426 SERPINF2P08697 491 aa15.43■□□□□ 0.06
SCLT1-209ENST00000511426 HLA-DPA1P20036 260 aa15.43■□□□□ 0.06
SCLT1-209ENST00000511426 SLCO1A2P46721 670 aa15.43■□□□□ 0.06
SCLT1-209ENST00000511426 WNT3AP56704 352 aa15.43■□□□□ 0.06
SCLT1-209ENST00000511426 DMC1Q14565 340 aa15.43■□□□□ 0.06
SCLT1-209ENST00000511426 PCID2Q5JVF3 399 aa15.43■□□□□ 0.06
SCLT1-209ENST00000511426 PRPF39Q86UA1 669 aaKnown RBP15.43■□□□□ 0.06
SCLT1-209ENST00000511426 SLC26A11Q86WA9 606 aa15.43■□□□□ 0.06
SCLT1-209ENST00000511426 IPMKQ8NFU5 416 aa15.43■□□□□ 0.06
SCLT1-209ENST00000511426 OR52K2Q8NGK3 314 aa15.43■□□□□ 0.06
SCLT1-209ENST00000511426 SPATA22Q8NHS9 363 aa15.43■□□□□ 0.06
SCLT1-209ENST00000511426 GDPD5Q8WTR4 605 aa15.43■□□□□ 0.06
SCLT1-209ENST00000511426 PEX13Q92968 403 aa15.43■□□□□ 0.06
SCLT1-209ENST00000511426 TIFAQ96CG3 184 aa15.43■□□□□ 0.06
SCLT1-209ENST00000511426 CFAP36Q96G28 342 aa15.43■□□□□ 0.06
SCLT1-209ENST00000511426 FEM1CQ96JP0 617 aa15.43■□□□□ 0.06
SCLT1-209ENST00000511426 MRGPRX2Q96LB1 330 aa15.43■□□□□ 0.06
SCLT1-209ENST00000511426 RANBP9Q96S59 729 aa15.43■□□□□ 0.06
SCLT1-209ENST00000511426 KIFC1Q9BW19 673 aa15.43■□□□□ 0.06
SCLT1-209ENST00000511426 SLC2A11Q9BYW1 496 aa15.43■□□□□ 0.06
SCLT1-209ENST00000511426 NSUN3Q9H649 340 aaKnown RBP15.43■□□□□ 0.06
SCLT1-209ENST00000511426 LMCD1Q9NZU5 365 aa15.43■□□□□ 0.06
SCLT1-209ENST00000511426 VPS28Q9UK41 221 aa15.43■□□□□ 0.06
SCLT1-209ENST00000511426 POC1B-GALNT4F8VUJ3 575 aa15.42■□□□□ 0.06
SCLT1-209ENST00000511426 ZMPSTE24O75844 475 aa15.42■□□□□ 0.06
SCLT1-209ENST00000511426 FAM155BO75949 473 aa15.42■□□□□ 0.06
SCLT1-209ENST00000511426 MT-CYBP00156 380 aaPredicted RBP15.42■□□□□ 0.06
SCLT1-209ENST00000511426 C1QAP02745 245 aa15.42■□□□□ 0.06
SCLT1-209ENST00000511426 HOXB8P17481 243 aaPredicted RBP15.42■□□□□ 0.06
SCLT1-209ENST00000511426 CA4P22748 312 aa15.42■□□□□ 0.06
SCLT1-209ENST00000511426 GCAP28676 217 aa15.42■□□□□ 0.06
SCLT1-209ENST00000511426 MAPK8P45983 427 aa15.42■□□□□ 0.06
SCLT1-209ENST00000511426 SERPINB9P50453 376 aa15.42■□□□□ 0.06
SCLT1-209ENST00000511426 ITKQ08881 620 aa15.42■□□□□ 0.06
SCLT1-209ENST00000511426 CRYMQ14894 314 aa15.42■□□□□ 0.06
SCLT1-209ENST00000511426 CAPN12Q6ZSI9 719 aa15.42■□□□□ 0.06
SCLT1-209ENST00000511426 MPP5Q8N3R9 675 aa15.42■□□□□ 0.06
SCLT1-209ENST00000511426 SH2D3CQ8N5H7 860 aa15.42■□□□□ 0.06
SCLT1-209ENST00000511426 VN1R2Q8NFZ6 395 aa15.42■□□□□ 0.06
SCLT1-209ENST00000511426 ALG14Q96F25 216 aa15.42■□□□□ 0.06
SCLT1-209ENST00000511426 SYBUQ9NX95 663 aa15.42■□□□□ 0.06
SCLT1-209ENST00000511426 GDE1Q9NZC3 331 aa15.42■□□□□ 0.06
SCLT1-209ENST00000511426 PRKAG3Q9UGI9 489 aa15.42■□□□□ 0.06
SCLT1-209ENST00000511426 FAM169AQ9Y6X4 670 aa15.42■□□□□ 0.06
SCLT1-209ENST00000511426 SHROOM3Q8TF72 1996 aa15.42■□□□□ 0.06
SCLT1-209ENST00000511426 LOC285095A0A1B0GVY8 99 aa15.41■□□□□ 0.06
SCLT1-209ENST00000511426 SMIM23A6NLE4 172 aa15.41■□□□□ 0.06
SCLT1-209ENST00000511426 F5H423 210 aaPredicted RBP15.41■□□□□ 0.06
SCLT1-209ENST00000511426 CBX4O00257 560 aa15.41■□□□□ 0.06
SCLT1-209ENST00000511426 NRG2O14511 850 aaPredicted RBP15.41■□□□□ 0.06
SCLT1-209ENST00000511426 FGF1P05230 155 aa15.41■□□□□ 0.06
SCLT1-209ENST00000511426 CEBPBP17676 345 aa15.41■□□□□ 0.06
SCLT1-209ENST00000511426 CR2P20023 1033 aa15.41■□□□□ 0.06
SCLT1-209ENST00000511426 SLC18A1P54219 525 aa15.41■□□□□ 0.06
SCLT1-209ENST00000511426 ARF5P84085 180 aa15.41■□□□□ 0.06
SCLT1-209ENST00000511426 ILF2Q12905 390 aaKnown RBP15.41■□□□□ 0.06
SCLT1-209ENST00000511426 SPARCL1Q14515 664 aa15.41■□□□□ 0.06
SCLT1-209ENST00000511426 KBTBD12Q3ZCT8 623 aa15.41■□□□□ 0.06
SCLT1-209ENST00000511426 DENND5AQ6IQ26 1287 aa15.41■□□□□ 0.06
SCLT1-209ENST00000511426 NLRP9Q7RTR0 991 aa15.41■□□□□ 0.06
SCLT1-209ENST00000511426 GPR149Q86SP6 731 aa15.41■□□□□ 0.06
SCLT1-209ENST00000511426 ARID3BQ8IVW6 561 aaPredicted RBP15.41■□□□□ 0.06
SCLT1-209ENST00000511426 EFHBQ8N7U6 833 aa15.41■□□□□ 0.06
SCLT1-209ENST00000511426 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.41■□□□□ 0.06
SCLT1-209ENST00000511426 GABPB2Q8TAK5 448 aaPredicted RBP15.41■□□□□ 0.06
SCLT1-209ENST00000511426 ALKBH8Q96BT7 664 aaKnown RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms