RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 H1FNTQ75WM6 255 aaPredicted RBP3.64□□□□□ -1.83
TRAPPC11-207ENST00000511409 PRSS45Q7RTY3 260 aa3.64□□□□□ -1.83
TRAPPC11-207ENST00000511409 KDELC2Q7Z4H8 507 aa3.64□□□□□ -1.83
TRAPPC11-207ENST00000511409 CPLX4Q7Z7G2 160 aa3.64□□□□□ -1.83
TRAPPC11-207ENST00000511409 TADA2BQ86TJ2 420 aa3.64□□□□□ -1.83
TRAPPC11-207ENST00000511409 FAM160B2Q86V87 743 aa3.64□□□□□ -1.83
TRAPPC11-207ENST00000511409 LURAP1LQ8IV03 231 aa3.64□□□□□ -1.83
TRAPPC11-207ENST00000511409 FAM217AQ8IXS0 508 aa3.64□□□□□ -1.83
TRAPPC11-207ENST00000511409 PLD5Q8N7P1 536 aa3.64□□□□□ -1.83
TRAPPC11-207ENST00000511409 TDRD7Q8NHU6 1098 aaKnown RBP3.64□□□□□ -1.83
TRAPPC11-207ENST00000511409 NFKBIDQ8NI38 313 aa3.64□□□□□ -1.83
TRAPPC11-207ENST00000511409 KCNG4Q8TDN1 519 aa3.64□□□□□ -1.83
TRAPPC11-207ENST00000511409 KLHL15Q96M94 604 aa3.64□□□□□ -1.83
TRAPPC11-207ENST00000511409 SPAG4Q9NPE6 437 aa3.64□□□□□ -1.83
TRAPPC11-207ENST00000511409 PNRC2Q9NPJ4 139 aaKnown RBP3.64□□□□□ -1.83
TRAPPC11-207ENST00000511409 SNTG1Q9NSN8 517 aa3.64□□□□□ -1.83
TRAPPC11-207ENST00000511409 MSRB1Q9NZV6 116 aa3.64□□□□□ -1.83
TRAPPC11-207ENST00000511409 KCND2Q9NZV8 630 aa3.64□□□□□ -1.83
TRAPPC11-207ENST00000511409 ORC3Q9UBD5 711 aaPredicted RBP3.64□□□□□ -1.83
TRAPPC11-207ENST00000511409 SARDHQ9UL12 918 aa3.64□□□□□ -1.83
TRAPPC11-207ENST00000511409 NAALADL1Q9UQQ1 740 aa3.64□□□□□ -1.83
TRAPPC11-207ENST00000511409 FRMD4BQ9Y2L6 1034 aa3.64□□□□□ -1.83
TRAPPC11-207ENST00000511409 ZMYM2Q9UBW7 1377 aa3.63□□□□□ -1.83
TRAPPC11-207ENST00000511409 MST1RQ04912 1400 aa3.63□□□□□ -1.83
TRAPPC11-207ENST00000511409 TRBV5-7A0A0A0MS05 114 aa3.63□□□□□ -1.83
TRAPPC11-207ENST00000511409 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.63□□□□□ -1.83
TRAPPC11-207ENST00000511409 A6NNC1 897 aa3.63□□□□□ -1.83
TRAPPC11-207ENST00000511409 RNMTO43148 476 aaKnown RBP3.63□□□□□ -1.83
TRAPPC11-207ENST00000511409 TACC1O75410 805 aa3.63□□□□□ -1.83
TRAPPC11-207ENST00000511409 GALTP07902 379 aa3.63□□□□□ -1.83
TRAPPC11-207ENST00000511409 UBL4AP11441 157 aa3.63□□□□□ -1.83
TRAPPC11-207ENST00000511409 UNGP13051 313 aaPredicted RBP3.63□□□□□ -1.83
TRAPPC11-207ENST00000511409 SLC2A4P14672 509 aa3.63□□□□□ -1.83
TRAPPC11-207ENST00000511409 ABCD1P33897 745 aa3.63□□□□□ -1.83
TRAPPC11-207ENST00000511409 YWHAZP63104 245 aaKnown RBP3.63□□□□□ -1.83
TRAPPC11-207ENST00000511409 MTX1Q13505 466 aa3.63□□□□□ -1.83
TRAPPC11-207ENST00000511409 RPE65Q16518 533 aa3.63□□□□□ -1.83
TRAPPC11-207ENST00000511409 SLC9B1Q4ZJI4 515 aa3.63□□□□□ -1.83
TRAPPC11-207ENST00000511409 PIK3CD-AS1Q5SR53 167 aa3.63□□□□□ -1.83
TRAPPC11-207ENST00000511409 PXDC1Q5TGL8 231 aa3.63□□□□□ -1.83
TRAPPC11-207ENST00000511409 MORN5Q5VZ52 161 aa3.63□□□□□ -1.83
TRAPPC11-207ENST00000511409 HAUS3Q68CZ6 603 aa3.63□□□□□ -1.83
TRAPPC11-207ENST00000511409 C17orf99Q6UX52 265 aa3.63□□□□□ -1.83
TRAPPC11-207ENST00000511409 DEF8Q6ZN54 512 aa3.63□□□□□ -1.83
TRAPPC11-207ENST00000511409 SERPINA11Q86U17 422 aa3.63□□□□□ -1.83
TRAPPC11-207ENST00000511409 GPAT4Q86UL3 456 aa3.63□□□□□ -1.83
TRAPPC11-207ENST00000511409 DIS3L2Q8IYB7 885 aaKnown RBP3.63□□□□□ -1.83
TRAPPC11-207ENST00000511409 CNTROBQ8N137 903 aa3.63□□□□□ -1.83
TRAPPC11-207ENST00000511409 HORMAD2Q8N7B1 307 aa3.63□□□□□ -1.83
TRAPPC11-207ENST00000511409 NANOGP1Q8N7R0 232 aa3.63□□□□□ -1.83
TRAPPC11-207ENST00000511409 DENND1AQ8TEH3 1009 aa3.63□□□□□ -1.83
TRAPPC11-207ENST00000511409 WIPF2Q8TF74 440 aaPredicted RBP3.63□□□□□ -1.83
TRAPPC11-207ENST00000511409 HDAC7Q8WUI4 952 aa3.63□□□□□ -1.83
TRAPPC11-207ENST00000511409 TMEM174Q8WUU8 243 aa3.63□□□□□ -1.83
TRAPPC11-207ENST00000511409 KLHL29Q96CT2 875 aa3.63□□□□□ -1.83
TRAPPC11-207ENST00000511409 SAAL1Q96ER3 474 aa3.63□□□□□ -1.83
TRAPPC11-207ENST00000511409 LBHD1Q9BQE6 289 aaPredicted RBP3.63□□□□□ -1.83
TRAPPC11-207ENST00000511409 WDR83Q9BRX9 315 aaKnown RBP3.63□□□□□ -1.83
TRAPPC11-207ENST00000511409 HEMGNQ9BXL5 484 aa3.63□□□□□ -1.83
TRAPPC11-207ENST00000511409 NUF2Q9BZD4 464 aa3.63□□□□□ -1.83
TRAPPC11-207ENST00000511409 B3GNT4Q9C0J1 378 aa3.63□□□□□ -1.83
TRAPPC11-207ENST00000511409 PCDHB16Q9NRJ7 776 aa3.63□□□□□ -1.83
TRAPPC11-207ENST00000511409 RNF146Q9NTX7 359 aa3.63□□□□□ -1.83
TRAPPC11-207ENST00000511409 TAS2R10Q9NYW0 307 aa3.63□□□□□ -1.83
TRAPPC11-207ENST00000511409 CTNNAL1Q9UBT7 734 aa3.63□□□□□ -1.83
TRAPPC11-207ENST00000511409 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.63□□□□□ -1.83
TRAPPC11-207ENST00000511409 CLDN16Q9Y5I7 305 aa3.63□□□□□ -1.83
TRAPPC11-207ENST00000511409 SLC4A4Q9Y6R1 1079 aa3.63□□□□□ -1.83
TRAPPC11-207ENST00000511409 A0A096LPK6 155 aa3.62□□□□□ -1.83
TRAPPC11-207ENST00000511409 TYW5A2RUC4 315 aaKnown RBP3.62□□□□□ -1.83
TRAPPC11-207ENST00000511409 C17orf102A2RUQ5 167 aa3.62□□□□□ -1.83
TRAPPC11-207ENST00000511409 WDR91A4D1P6 747 aa3.62□□□□□ -1.83
TRAPPC11-207ENST00000511409 FAM157AC9JC47 383 aa3.62□□□□□ -1.83
TRAPPC11-207ENST00000511409 NDUFB8O95169 186 aa3.62□□□□□ -1.83
TRAPPC11-207ENST00000511409 HSPA1AP0DMV8 641 aaKnown RBP3.62□□□□□ -1.83
TRAPPC11-207ENST00000511409 HSPA1BP0DMV9 641 aaKnown RBP3.62□□□□□ -1.83
TRAPPC11-207ENST00000511409 EPHA8P29322 1005 aaPredicted RBP3.62□□□□□ -1.83
TRAPPC11-207ENST00000511409 TNFSF8P32971 234 aa3.62□□□□□ -1.83
TRAPPC11-207ENST00000511409 ARL1P40616 181 aaPredicted RBP3.62□□□□□ -1.83
TRAPPC11-207ENST00000511409 BLKP51451 505 aa3.62□□□□□ -1.83
TRAPPC11-207ENST00000511409 MRPS21P82921 87 aaKnown RBP3.62□□□□□ -1.83
TRAPPC11-207ENST00000511409 PTP4A2Q12974 167 aa3.62□□□□□ -1.83
TRAPPC11-207ENST00000511409 DCTN2Q13561 401 aaKnown RBP3.62□□□□□ -1.83
TRAPPC11-207ENST00000511409 SIM2Q14190 667 aaPredicted RBP3.62□□□□□ -1.83
TRAPPC11-207ENST00000511409 RABEP1Q15276 862 aa3.62□□□□□ -1.83
TRAPPC11-207ENST00000511409 RBMS2Q15434 407 aaKnown RBP3.62□□□□□ -1.83
TRAPPC11-207ENST00000511409 TAF11Q15544 211 aa3.62□□□□□ -1.83
TRAPPC11-207ENST00000511409 INPP5JQ15735 1006 aaPredicted RBP3.62□□□□□ -1.83
TRAPPC11-207ENST00000511409 C10orf25Q5T742 122 aa3.62□□□□□ -1.83
TRAPPC11-207ENST00000511409 SERTAD4-AS1Q5TG53 156 aa3.62□□□□□ -1.83
TRAPPC11-207ENST00000511409 TBC1D9BQ66K14 1250 aa3.62□□□□□ -1.83
TRAPPC11-207ENST00000511409 CES5AQ6NT32 575 aa3.62□□□□□ -1.83
TRAPPC11-207ENST00000511409 TBC1D1Q86TI0 1168 aaPredicted RBP3.62□□□□□ -1.83
TRAPPC11-207ENST00000511409 TRIM74Q86UV6 250 aa3.62□□□□□ -1.83
TRAPPC11-207ENST00000511409 TRIM73Q86UV7 250 aa3.62□□□□□ -1.83
TRAPPC11-207ENST00000511409 GPSM1Q86YR5 675 aa3.62□□□□□ -1.83
TRAPPC11-207ENST00000511409 CAMK1DQ8IU85 385 aa3.62□□□□□ -1.83
TRAPPC11-207ENST00000511409 SRRM1Q8IYB3 904 aaKnown RBP3.62□□□□□ -1.83
TRAPPC11-207ENST00000511409 C11orf65Q8NCR3 313 aa3.62□□□□□ -1.83
TRAPPC11-207ENST00000511409 METTL6Q8TCB7 284 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms