RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 PABPC3Q9H361 631 aaKnown RBP13.08□□□□□ -0.32
COL6A6-203ENST00000511332 DTLQ9NZJ0 730 aa13.08□□□□□ -0.32
COL6A6-203ENST00000511332 SEPT3Q9UH03 358 aa13.08□□□□□ -0.32
COL6A6-203ENST00000511332 IL36AQ9UHA7 158 aa13.08□□□□□ -0.32
COL6A6-203ENST00000511332 RAB23Q9ULC3 237 aa13.08□□□□□ -0.32
COL6A6-203ENST00000511332 PACSIN2Q9UNF0 486 aaPredicted RBP13.08□□□□□ -0.32
COL6A6-203ENST00000511332 EFR3BQ9Y2G0 817 aa13.08□□□□□ -0.32
COL6A6-203ENST00000511332 HEY1Q9Y5J3 304 aa13.08□□□□□ -0.32
COL6A6-203ENST00000511332 GOLGA6L9A6NEM1 432 aa13.07□□□□□ -0.32
COL6A6-203ENST00000511332 CST8O60676 142 aa13.07□□□□□ -0.32
COL6A6-203ENST00000511332 ZNF821O75541 412 aaPredicted RBP13.07□□□□□ -0.32
COL6A6-203ENST00000511332 IGLV3-19P01714 112 aa13.07□□□□□ -0.32
COL6A6-203ENST00000511332 KRT10P13645 584 aa13.07□□□□□ -0.32
COL6A6-203ENST00000511332 MSNP26038 577 aaKnown RBP13.07□□□□□ -0.32
COL6A6-203ENST00000511332 OXTRP30559 389 aa13.07□□□□□ -0.32
COL6A6-203ENST00000511332 CHRNA3P32297 505 aa13.07□□□□□ -0.32
COL6A6-203ENST00000511332 HSPA9P38646 679 aaKnown RBP13.07□□□□□ -0.32
COL6A6-203ENST00000511332 NR2C2P49116 596 aa13.07□□□□□ -0.32
COL6A6-203ENST00000511332 TPMTP51580 245 aa13.07□□□□□ -0.32
COL6A6-203ENST00000511332 RENBPP51606 427 aa13.07□□□□□ -0.32
COL6A6-203ENST00000511332 CCNHP51946 323 aaPredicted RBP13.07□□□□□ -0.32
COL6A6-203ENST00000511332 NHLH1Q02575 133 aa13.07□□□□□ -0.32
COL6A6-203ENST00000511332 RAD51Q06609 339 aa13.07□□□□□ -0.32
COL6A6-203ENST00000511332 ZNF33AQ06730 810 aa13.07□□□□□ -0.32
COL6A6-203ENST00000511332 SIM2Q14190 667 aaPredicted RBP13.07□□□□□ -0.32
COL6A6-203ENST00000511332 LBRQ14739 615 aaKnown RBP13.07□□□□□ -0.32
COL6A6-203ENST00000511332 GRM3Q14832 879 aa13.07□□□□□ -0.32
COL6A6-203ENST00000511332 PDK1Q15118 436 aa13.07□□□□□ -0.32
COL6A6-203ENST00000511332 MAP7D1Q3KQU3 841 aa13.07□□□□□ -0.32
COL6A6-203ENST00000511332 KAZNQ674X7 775 aa13.07□□□□□ -0.32
COL6A6-203ENST00000511332 SLC36A4Q6YBV0 504 aa13.07□□□□□ -0.32
COL6A6-203ENST00000511332 DPY19L3Q6ZPD9 716 aa13.07□□□□□ -0.32
COL6A6-203ENST00000511332 USP30Q70CQ3 517 aa13.07□□□□□ -0.32
COL6A6-203ENST00000511332 TP53INP2Q8IXH6 220 aa13.07□□□□□ -0.32
COL6A6-203ENST00000511332 RYBPQ8N488 228 aaPredicted RBP13.07□□□□□ -0.32
COL6A6-203ENST00000511332 TMIEQ8NEW7 156 aa13.07□□□□□ -0.32
COL6A6-203ENST00000511332 PIP4K2CQ8TBX8 421 aa13.07□□□□□ -0.32
COL6A6-203ENST00000511332 GRIN3AQ8TCU5 1115 aa13.07□□□□□ -0.32
COL6A6-203ENST00000511332 LRIG1Q96JA1 1093 aa13.07□□□□□ -0.32
COL6A6-203ENST00000511332 FAM129BQ96TA1 746 aa13.07□□□□□ -0.32
COL6A6-203ENST00000511332 HEPHQ9BQS7 1158 aa13.07□□□□□ -0.32
COL6A6-203ENST00000511332 BRD8Q9H0E9 1235 aa13.07□□□□□ -0.32
COL6A6-203ENST00000511332 ZDHHC6Q9H6R6 413 aa13.07□□□□□ -0.32
COL6A6-203ENST00000511332 ITM2CQ9NQX7 267 aa13.07□□□□□ -0.32
COL6A6-203ENST00000511332 FAM86C1Q9NVL1 165 aa13.07□□□□□ -0.32
COL6A6-203ENST00000511332 LHX3Q9UBR4 397 aa13.07□□□□□ -0.32
COL6A6-203ENST00000511332 FZD4Q9ULV1 537 aa13.07□□□□□ -0.32
COL6A6-203ENST00000511332 CYP8B1Q9UNU6 501 aa13.07□□□□□ -0.32
COL6A6-203ENST00000511332 NCKAP1Q9Y2A7 1128 aa13.07□□□□□ -0.32
COL6A6-203ENST00000511332 ACTL7AQ9Y615 435 aa13.07□□□□□ -0.32
COL6A6-203ENST00000511332 RALGAPA1Q6GYQ0 2036 aa13.06□□□□□ -0.32
COL6A6-203ENST00000511332 IGHV1OR15-9A0A0B4J2B8 117 aa13.06□□□□□ -0.32
COL6A6-203ENST00000511332 APOC4-APOC2K7ER74 178 aa13.06□□□□□ -0.32
COL6A6-203ENST00000511332 MID1O15344 667 aa13.06□□□□□ -0.32
COL6A6-203ENST00000511332 DDX3YO15523 660 aaKnown RBP13.06□□□□□ -0.32
COL6A6-203ENST00000511332 MAP3K6O95382 1288 aa13.06□□□□□ -0.32
COL6A6-203ENST00000511332 APOC2P02655 101 aa13.06□□□□□ -0.32
COL6A6-203ENST00000511332 CCNCP24863 283 aa13.06□□□□□ -0.32
COL6A6-203ENST00000511332 CD6P30203 668 aa13.06□□□□□ -0.32
COL6A6-203ENST00000511332 SLC8A1P32418 973 aa13.06□□□□□ -0.32
COL6A6-203ENST00000511332 MAPK8P45983 427 aa13.06□□□□□ -0.32
COL6A6-203ENST00000511332 CCDC15Q0P6D6 951 aa13.06□□□□□ -0.32
COL6A6-203ENST00000511332 SRSF5Q13243 272 aaKnown RBP13.06□□□□□ -0.32
COL6A6-203ENST00000511332 ELF2Q15723 593 aa13.06□□□□□ -0.32
COL6A6-203ENST00000511332 ATXN7L2Q5T6C5 722 aaPredicted RBP13.06□□□□□ -0.32
COL6A6-203ENST00000511332 SEL1L2Q5TEA6 688 aa13.06□□□□□ -0.32
COL6A6-203ENST00000511332 MEI1Q5TIA1 1274 aa13.06□□□□□ -0.32
COL6A6-203ENST00000511332 CCDC181Q5TID7 509 aa13.06□□□□□ -0.32
COL6A6-203ENST00000511332 MARC1Q5VT66 337 aa13.06□□□□□ -0.32
COL6A6-203ENST00000511332 PRR23BQ6ZRT6 265 aa13.06□□□□□ -0.32
COL6A6-203ENST00000511332 BBS12Q6ZW61 710 aa13.06□□□□□ -0.32
COL6A6-203ENST00000511332 CCNYQ8ND76 341 aa13.06□□□□□ -0.32
COL6A6-203ENST00000511332 GANCQ8TET4 914 aa13.06□□□□□ -0.32
COL6A6-203ENST00000511332 RLN3Q8WXF3 142 aa13.06□□□□□ -0.32
COL6A6-203ENST00000511332 P3H4Q92791 437 aa13.06□□□□□ -0.32
COL6A6-203ENST00000511332 OLFM3Q96PB7 478 aa13.06□□□□□ -0.32
COL6A6-203ENST00000511332 TSGA13Q96PP4 275 aa13.06□□□□□ -0.32
COL6A6-203ENST00000511332 PSKH2Q96QS6 385 aa13.06□□□□□ -0.32
COL6A6-203ENST00000511332 OMDQ99983 421 aa13.06□□□□□ -0.32
COL6A6-203ENST00000511332 OSBPL1AQ9BXW6 950 aa13.06□□□□□ -0.32
COL6A6-203ENST00000511332 OSBPL8Q9BZF1 889 aa13.06□□□□□ -0.32
COL6A6-203ENST00000511332 DYRK4Q9NR20 520 aa13.06□□□□□ -0.32
COL6A6-203ENST00000511332 HECAQ9UBI9 543 aaPredicted RBP13.06□□□□□ -0.32
COL6A6-203ENST00000511332 RAPGEFL1Q9UHV5 662 aa13.06□□□□□ -0.32
COL6A6-203ENST00000511332 PPM1HQ9ULR3 514 aa13.06□□□□□ -0.32
COL6A6-203ENST00000511332 SMG5Q9UPR3 1016 aaKnown RBP13.06□□□□□ -0.32
COL6A6-203ENST00000511332 TP53BP1Q12888 1972 aaPredicted RBP13.05□□□□□ -0.32
COL6A6-203ENST00000511332 KPNA3O00505 521 aaPredicted RBP13.05□□□□□ -0.32
COL6A6-203ENST00000511332 KRIT1O00522 736 aa13.05□□□□□ -0.32
COL6A6-203ENST00000511332 SLC7A4O43246 635 aa13.05□□□□□ -0.32
COL6A6-203ENST00000511332 MAP3K13O43283 966 aa13.05□□□□□ -0.32
COL6A6-203ENST00000511332 HRO43593 1189 aa13.05□□□□□ -0.32
COL6A6-203ENST00000511332 NDUFS2O75306 463 aa13.05□□□□□ -0.32
COL6A6-203ENST00000511332 LEFTY1O75610 366 aa13.05□□□□□ -0.32
COL6A6-203ENST00000511332 RNASEH2AO75792 299 aaKnown RBP13.05□□□□□ -0.32
COL6A6-203ENST00000511332 NEBLO76041 1014 aa13.05□□□□□ -0.32
COL6A6-203ENST00000511332 RHOBTB1O94844 696 aa13.05□□□□□ -0.32
COL6A6-203ENST00000511332 TJP3O95049 919 aa13.05□□□□□ -0.32
COL6A6-203ENST00000511332 POP4O95707 220 aaKnown RBP13.05□□□□□ -0.32
COL6A6-203ENST00000511332 CTSLP07711 333 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms