RNA–Protein interactions for RNA: ENST00000511116.5

SMAD5-207, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-207ENST00000511116 PCDH8O95206 1070 aa23.31■■□□□ 1.32
SMAD5-207ENST00000511116 ADRB3P13945 408 aa23.31■■□□□ 1.32
SMAD5-207ENST00000511116 NME1P15531 152 aaKnown RBP23.31■■□□□ 1.32
SMAD5-207ENST00000511116 SERPINH1P50454 418 aaKnown RBP23.31■■□□□ 1.32
SMAD5-207ENST00000511116 HNRNPKP61978 463 aaKnown RBP eCLIP23.31■■□□□ 1.32
SMAD5-207ENST00000511116 RPS21P63220 83 aaKnown RBP23.31■■□□□ 1.32
SMAD5-207ENST00000511116 DEUP1Q05D60 604 aa23.31■■□□□ 1.32
SMAD5-207ENST00000511116 CCDC173Q0VFZ6 552 aa23.31■■□□□ 1.32
SMAD5-207ENST00000511116 FZD2Q14332 565 aa23.31■■□□□ 1.32
SMAD5-207ENST00000511116 TMC6Q7Z403 805 aa23.31■■□□□ 1.32
SMAD5-207ENST00000511116 TFAP2DQ7Z6R9 452 aa23.31■■□□□ 1.32
SMAD5-207ENST00000511116 LSMEM2Q8N112 164 aa23.31■■□□□ 1.32
SMAD5-207ENST00000511116 PCDH20Q8N6Y1 951 aaKnown RBP23.31■■□□□ 1.32
SMAD5-207ENST00000511116 OR7D4Q8NG98 312 aa23.31■■□□□ 1.32
SMAD5-207ENST00000511116 DEPDC7Q96QD5 511 aa23.31■■□□□ 1.32
SMAD5-207ENST00000511116 HAPLN3Q96S86 360 aa23.31■■□□□ 1.32
SMAD5-207ENST00000511116 SLC17A9Q9BYT1 436 aa23.31■■□□□ 1.32
SMAD5-207ENST00000511116 TMPRSS4Q9NRS4 437 aa23.31■■□□□ 1.32
SMAD5-207ENST00000511116 KIAA1468Q9P260 1216 aa23.31■■□□□ 1.32
SMAD5-207ENST00000511116 FADS3Q9Y5Q0 445 aa23.31■■□□□ 1.32
SMAD5-207ENST00000511116 SPTY2D1-AS1A0A0U1RR47 76 aa23.3■■□□□ 1.32
SMAD5-207ENST00000511116 POM121BA6NF01 834 aa23.3■■□□□ 1.32
SMAD5-207ENST00000511116 RIOK3O14730 519 aaKnown RBP23.3■■□□□ 1.32
SMAD5-207ENST00000511116 CSF2P04141 144 aa23.3■■□□□ 1.32
SMAD5-207ENST00000511116 PNMA6AP0CW24 399 aaPredicted RBP23.3■■□□□ 1.32
SMAD5-207ENST00000511116 OR1E1P30953 314 aa23.3■■□□□ 1.32
SMAD5-207ENST00000511116 L1CAMP32004 1257 aa23.3■■□□□ 1.32
SMAD5-207ENST00000511116 RECQLP46063 649 aaPredicted RBP23.3■■□□□ 1.32
SMAD5-207ENST00000511116 LSSP48449 732 aa23.3■■□□□ 1.32
SMAD5-207ENST00000511116 PCBP4P57723 403 aaKnown RBP23.3■■□□□ 1.32
SMAD5-207ENST00000511116 BPIFB4P59827 614 aa23.3■■□□□ 1.32
SMAD5-207ENST00000511116 ERVPABLB-1P60509 514 aa23.3■■□□□ 1.32
SMAD5-207ENST00000511116 ARF5P84085 180 aa23.3■■□□□ 1.32
SMAD5-207ENST00000511116 TRNP1Q6NT89 227 aa23.3■■□□□ 1.32
SMAD5-207ENST00000511116 RETSATQ6NUM9 610 aa23.3■■□□□ 1.32
SMAD5-207ENST00000511116 IGF2-ASQ6U949 168 aa23.3■■□□□ 1.32
SMAD5-207ENST00000511116 ARCQ7LC44 396 aa23.3■■□□□ 1.32
SMAD5-207ENST00000511116 XYLT1Q86Y38 959 aa23.3■■□□□ 1.32
SMAD5-207ENST00000511116 PLPP6Q8IY26 295 aa23.3■■□□□ 1.32
SMAD5-207ENST00000511116 TMEM35BQ8NCS4 154 aa23.3■■□□□ 1.32
SMAD5-207ENST00000511116 VOPP1Q96AW1 172 aa23.3■■□□□ 1.32
SMAD5-207ENST00000511116 LENG8Q96PV6 779 aaPredicted RBP23.3■■□□□ 1.32
SMAD5-207ENST00000511116 KLF6Q99612 283 aaPredicted RBP23.3■■□□□ 1.32
SMAD5-207ENST00000511116 CSNK1G3Q9Y6M4 447 aa23.3■■□□□ 1.32
SMAD5-207ENST00000511116 RAD51BO15315 384 aa23.29■■□□□ 1.32
SMAD5-207ENST00000511116 CD160O95971 181 aa23.29■■□□□ 1.32
SMAD5-207ENST00000511116 FLT3P36888 993 aa23.29■■□□□ 1.32
SMAD5-207ENST00000511116 DUSP3P51452 185 aaPredicted RBP23.29■■□□□ 1.32
SMAD5-207ENST00000511116 RNASE9P60153 205 aaKnown RBP23.29■■□□□ 1.32
SMAD5-207ENST00000511116 PTAR1Q7Z6K3 402 aaPredicted RBP23.29■■□□□ 1.32
SMAD5-207ENST00000511116 ZNF843Q8N446 348 aa23.29■■□□□ 1.32
SMAD5-207ENST00000511116 ZNF548Q8NEK5 533 aaPredicted RBP23.29■■□□□ 1.32
SMAD5-207ENST00000511116 ASB12Q8WXK4 309 aa23.29■■□□□ 1.32
SMAD5-207ENST00000511116 C18orf8Q96DM3 657 aa23.29■■□□□ 1.32
SMAD5-207ENST00000511116 FEM1CQ96JP0 617 aa23.29■■□□□ 1.32
SMAD5-207ENST00000511116 HEPHQ9BQS7 1158 aa23.29■■□□□ 1.32
SMAD5-207ENST00000511116 C1QTNF2Q9BXJ5 285 aa23.29■■□□□ 1.32
SMAD5-207ENST00000511116 POLR1BQ9H9Y6 1135 aa23.29■■□□□ 1.32
SMAD5-207ENST00000511116 ASCL3Q9NQ33 180 aa23.29■■□□□ 1.32
SMAD5-207ENST00000511116 DNAJC28Q9NX36 388 aa23.29■■□□□ 1.32
SMAD5-207ENST00000511116 PPARGC1AQ9UBK2 798 aaKnown RBP23.29■■□□□ 1.32
SMAD5-207ENST00000511116 TMEM59LQ9UK28 342 aa23.29■■□□□ 1.32
SMAD5-207ENST00000511116 SSUH2Q9Y2M2 353 aa23.29■■□□□ 1.32
SMAD5-207ENST00000511116 MPOP05164 745 aa23.28■■□□□ 1.32
SMAD5-207ENST00000511116 BECN1Q14457 450 aa23.28■■□□□ 1.32
SMAD5-207ENST00000511116 ZNF542PQ5EBM4 170 aa23.28■■□□□ 1.32
SMAD5-207ENST00000511116 CARD16Q5EG05 197 aa23.28■■□□□ 1.32
SMAD5-207ENST00000511116 FAM102AQ5T9C2 384 aaPredicted RBP23.28■■□□□ 1.32
SMAD5-207ENST00000511116 ZCCHC8Q6NZY4 707 aaKnown RBP23.28■■□□□ 1.32
SMAD5-207ENST00000511116 PARS2Q7L3T8 475 aaKnown RBP23.28■■□□□ 1.32
SMAD5-207ENST00000511116 PARGQ86W56 976 aa23.28■■□□□ 1.32
SMAD5-207ENST00000511116 ISG20Q96AZ6 181 aaKnown RBP23.28■■□□□ 1.32
SMAD5-207ENST00000511116 LGMNQ99538 433 aa23.28■■□□□ 1.32
SMAD5-207ENST00000511116 EVA1BQ9NVM1 165 aa23.28■■□□□ 1.32
SMAD5-207ENST00000511116 TENM4Q6N022 2769 aa23.27■■□□□ 1.32
SMAD5-207ENST00000511116 ERVH48-1M5A8F1 160 aa23.27■■□□□ 1.32
SMAD5-207ENST00000511116 USP12O75317 370 aa23.27■■□□□ 1.32
SMAD5-207ENST00000511116 CSO75390 466 aaKnown RBP23.27■■□□□ 1.32
SMAD5-207ENST00000511116 NEBLO76041 1014 aa23.27■■□□□ 1.32
SMAD5-207ENST00000511116 ENDOD1O94919 500 aa23.27■■□□□ 1.32
SMAD5-207ENST00000511116 PAK4O96013 591 aaPredicted RBP23.27■■□□□ 1.32
SMAD5-207ENST00000511116 MYF5P13349 255 aa23.27■■□□□ 1.32
SMAD5-207ENST00000511116 CYP11B1P15538 503 aa23.27■■□□□ 1.32
SMAD5-207ENST00000511116 RABIFP47224 123 aa23.27■■□□□ 1.32
SMAD5-207ENST00000511116 CCNHP51946 323 aaPredicted RBP23.27■■□□□ 1.32
SMAD5-207ENST00000511116 GABREP78334 506 aa23.27■■□□□ 1.32
SMAD5-207ENST00000511116 GNA12Q03113 381 aa23.27■■□□□ 1.32
SMAD5-207ENST00000511116 MAN2A1Q16706 1144 aa23.27■■□□□ 1.32
SMAD5-207ENST00000511116 SNRNP27Q8WVK2 155 aaKnown RBP23.27■■□□□ 1.32
SMAD5-207ENST00000511116 WBP1Q96G27 269 aa23.27■■□□□ 1.32
SMAD5-207ENST00000511116 ZYG11BQ9C0D3 744 aa23.27■■□□□ 1.32
SMAD5-207ENST00000511116 ATP13A1Q9HD20 1204 aa23.27■■□□□ 1.32
SMAD5-207ENST00000511116 KLF15Q9UIH9 416 aa23.27■■□□□ 1.32
SMAD5-207ENST00000511116 LSM8O95777 96 aaKnown RBP23.26■■□□□ 1.31
SMAD5-207ENST00000511116 MTIF2P46199 727 aaKnown RBP23.26■■□□□ 1.31
SMAD5-207ENST00000511116 UCNP55089 124 aa23.26■■□□□ 1.31
SMAD5-207ENST00000511116 PFN3P60673 137 aa23.26■■□□□ 1.31
SMAD5-207ENST00000511116 CXADRP78310 365 aa23.26■■□□□ 1.31
SMAD5-207ENST00000511116 NRG1Q02297 640 aaPredicted RBP23.26■■□□□ 1.31
SMAD5-207ENST00000511116 ISXQ2M1V0 245 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms