RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 GEMIN4P57678 1058 aaKnown RBP23.41■■□□□ 1.34
SNF8-209ENST00000510558 NR1I3Q14994 352 aa23.41■■□□□ 1.34
SNF8-209ENST00000510558 POLD3Q15054 466 aaPredicted RBP23.41■■□□□ 1.34
SNF8-209ENST00000510558 SETMARQ53H47 684 aaPredicted RBP23.41■■□□□ 1.34
SNF8-209ENST00000510558 ZNF571Q7Z3V5 609 aaPredicted RBP23.41■■□□□ 1.34
SNF8-209ENST00000510558 RTL3Q8N8U3 475 aaKnown RBP23.41■■□□□ 1.34
SNF8-209ENST00000510558 PNPLA1Q8N8W4 532 aa23.41■■□□□ 1.34
SNF8-209ENST00000510558 MFSD2AQ8NA29 543 aa23.41■■□□□ 1.34
SNF8-209ENST00000510558 ADAMTS14Q8WXS8 1223 aa23.41■■□□□ 1.34
SNF8-209ENST00000510558 ISG20Q96AZ6 181 aaKnown RBP23.41■■□□□ 1.34
SNF8-209ENST00000510558 HDAC8Q9BY41 377 aa23.41■■□□□ 1.34
SNF8-209ENST00000510558 TM6SF2Q9BZW4 377 aa23.41■■□□□ 1.34
SNF8-209ENST00000510558 TTYH3Q9C0H2 523 aa23.41■■□□□ 1.34
SNF8-209ENST00000510558 CBX8Q9HC52 389 aa23.41■■□□□ 1.34
SNF8-209ENST00000510558 KMT2BQ9UMN6 2715 aaPredicted RBP23.4■■□□□ 1.34
SNF8-209ENST00000510558 TRPM6Q9BX84 2022 aa23.4■■□□□ 1.34
SNF8-209ENST00000510558 ATMINO43313 823 aaPredicted RBP23.4■■□□□ 1.34
SNF8-209ENST00000510558 PROS1P07225 676 aa23.4■■□□□ 1.34
SNF8-209ENST00000510558 PRKCIP41743 596 aa23.4■■□□□ 1.34
SNF8-209ENST00000510558 NXPH1P58417 271 aa23.4■■□□□ 1.34
SNF8-209ENST00000510558 MAMLD1Q13495 774 aa23.4■■□□□ 1.34
SNF8-209ENST00000510558 PLEKHA7Q6IQ23 1121 aa23.4■■□□□ 1.34
SNF8-209ENST00000510558 NEK5Q6P3R8 708 aa23.4■■□□□ 1.34
SNF8-209ENST00000510558 TMC6Q7Z403 805 aa23.4■■□□□ 1.34
SNF8-209ENST00000510558 SLCO6A1Q86UG4 719 aa23.4■■□□□ 1.34
SNF8-209ENST00000510558 GATA6Q92908 595 aa23.4■■□□□ 1.34
SNF8-209ENST00000510558 EPAS1Q99814 870 aa23.4■■□□□ 1.34
SNF8-209ENST00000510558 EDEM3Q9BZQ6 932 aa23.4■■□□□ 1.34
SNF8-209ENST00000510558 PARVAQ9NVD7 372 aa23.4■■□□□ 1.34
SNF8-209ENST00000510558 MSRB2Q9Y3D2 182 aa23.4■■□□□ 1.34
SNF8-209ENST00000510558 USP24Q9UPU5 2620 aa23.4■■□□□ 1.34
SNF8-209ENST00000510558 A0A1W2PQU0 124 aa23.39■■□□□ 1.33
SNF8-209ENST00000510558 PRAMEF26H0Y7S4 382 aa23.39■■□□□ 1.33
SNF8-209ENST00000510558 CREB3O43889 395 aa23.39■■□□□ 1.33
SNF8-209ENST00000510558 NEK3P51956 506 aa23.39■■□□□ 1.33
SNF8-209ENST00000510558 KLHL30Q0D2K2 578 aa23.39■■□□□ 1.33
SNF8-209ENST00000510558 STAT4Q14765 748 aa23.39■■□□□ 1.33
SNF8-209ENST00000510558 SHBQ15464 509 aa23.39■■□□□ 1.33
SNF8-209ENST00000510558 INAVAQ3KP66 663 aa23.39■■□□□ 1.33
SNF8-209ENST00000510558 IQCHQ86VS3 1027 aa23.39■■□□□ 1.33
SNF8-209ENST00000510558 HORMAD1Q86X24 394 aa23.39■■□□□ 1.33
SNF8-209ENST00000510558 DNAAF5Q86Y56 855 aa23.39■■□□□ 1.33
SNF8-209ENST00000510558 GATAD2AQ86YP4 633 aa23.39■■□□□ 1.33
SNF8-209ENST00000510558 PLPP6Q8IY26 295 aa23.39■■□□□ 1.33
SNF8-209ENST00000510558 NOL6Q9H6R4 1146 aaKnown RBP23.39■■□□□ 1.33
SNF8-209ENST00000510558 ZDHHC6Q9H6R6 413 aa23.39■■□□□ 1.33
SNF8-209ENST00000510558 HECAQ9UBI9 543 aaPredicted RBP23.39■■□□□ 1.33
SNF8-209ENST00000510558 PTPRBP23467 1997 aa23.39■■□□□ 1.33
SNF8-209ENST00000510558 DDX3XO00571 662 aaKnown RBP eCLIP23.38■■□□□ 1.334e-14■■■■■ 27.5
SNF8-209ENST00000510558 SLC31A1O15431 190 aa23.38■■□□□ 1.33
SNF8-209ENST00000510558 KDELR3O43731 214 aa23.38■■□□□ 1.33
SNF8-209ENST00000510558 PCDH8O95206 1070 aa23.38■■□□□ 1.33
SNF8-209ENST00000510558 ATXN1LP0C7T5 689 aaKnown RBP23.38■■□□□ 1.33
SNF8-209ENST00000510558 PSMA2P25787 234 aa23.38■■□□□ 1.33
SNF8-209ENST00000510558 ITGB7P26010 798 aa23.38■■□□□ 1.33
SNF8-209ENST00000510558 TPM4P67936 248 aa23.38■■□□□ 1.33
SNF8-209ENST00000510558 OVGP1Q12889 678 aa23.38■■□□□ 1.33
SNF8-209ENST00000510558 ZNF284Q2VY69 593 aa23.38■■□□□ 1.33
SNF8-209ENST00000510558 LEKR1Q6ZMV7 388 aa23.38■■□□□ 1.33
SNF8-209ENST00000510558 LUZP1Q86V48 1076 aa23.38■■□□□ 1.33
SNF8-209ENST00000510558 ZNF354CQ86Y25 554 aa23.38■■□□□ 1.33
SNF8-209ENST00000510558 KLK6Q92876 244 aa23.38■■□□□ 1.33
SNF8-209ENST00000510558 CATSPERBQ9H7T0 1116 aa23.38■■□□□ 1.33
SNF8-209ENST00000510558 TOR4AQ9NXH8 423 aa23.38■■□□□ 1.33
SNF8-209ENST00000510558 ZFR2Q9UPR6 939 aaKnown RBP23.38■■□□□ 1.33
SNF8-209ENST00000510558 CA5BQ9Y2D0 317 aa23.38■■□□□ 1.33
SNF8-209ENST00000510558 COL5A1P20908 1838 aaPredicted RBP23.38■■□□□ 1.33
SNF8-209ENST00000510558 FAM221BA6H8Z2 402 aa23.37■■□□□ 1.33
SNF8-209ENST00000510558 ZSCAN5CA6NGD5 496 aaPredicted RBP23.37■■□□□ 1.33
SNF8-209ENST00000510558 WASH4PA8MWX3 477 aa23.37■■□□□ 1.33
SNF8-209ENST00000510558 YKT6O15498 198 aa23.37■■□□□ 1.33
SNF8-209ENST00000510558 MAGEC1O60732 1142 aa23.37■■□□□ 1.33
SNF8-209ENST00000510558 FTLP02792 175 aaPredicted RBP23.37■■□□□ 1.33
SNF8-209ENST00000510558 GZMAP12544 262 aa23.37■■□□□ 1.33
SNF8-209ENST00000510558 ADRB3P13945 408 aa23.37■■□□□ 1.33
SNF8-209ENST00000510558 PRLRP16471 622 aa23.37■■□□□ 1.33
SNF8-209ENST00000510558 ARRB1P49407 418 aaPredicted RBP23.37■■□□□ 1.33
SNF8-209ENST00000510558 FANCCQ00597 558 aa23.37■■□□□ 1.33
SNF8-209ENST00000510558 FIGNQ5HY92 759 aa23.37■■□□□ 1.33
SNF8-209ENST00000510558 PARS2Q7L3T8 475 aaKnown RBP23.37■■□□□ 1.33
SNF8-209ENST00000510558 SPATS2Q86XZ4 545 aaKnown RBP23.37■■□□□ 1.33
SNF8-209ENST00000510558 RYBPQ8N488 228 aaPredicted RBP23.37■■□□□ 1.33
SNF8-209ENST00000510558 OXR1Q8N573 874 aa23.37■■□□□ 1.33
SNF8-209ENST00000510558 OR2AP1Q8NGE2 309 aa23.37■■□□□ 1.33
SNF8-209ENST00000510558 OR6K2Q8NGY2 324 aa23.37■■□□□ 1.33
SNF8-209ENST00000510558 MYOCQ99972 504 aa23.37■■□□□ 1.33
SNF8-209ENST00000510558 ERVMER34-1Q9H9K5 563 aa23.37■■□□□ 1.33
SNF8-209ENST00000510558 GPATCH2LQ9NWQ4 482 aa23.37■■□□□ 1.33
SNF8-209ENST00000510558 FRYQ5TBA9 3013 aa23.37■■□□□ 1.33
SNF8-209ENST00000510558 PLXNB3Q9ULL4 1909 aa23.36■■□□□ 1.33
SNF8-209ENST00000510558 TNFSF14O43557 240 aa23.36■■□□□ 1.33
SNF8-209ENST00000510558 BUB1O43683 1085 aa23.36■■□□□ 1.33
SNF8-209ENST00000510558 GSRP00390 522 aa23.36■■□□□ 1.33
SNF8-209ENST00000510558 ITGAVP06756 1048 aa23.36■■□□□ 1.33
SNF8-209ENST00000510558 SKILP12757 684 aa23.36■■□□□ 1.33
SNF8-209ENST00000510558 EPHA8P29322 1005 aaPredicted RBP23.36■■□□□ 1.33
SNF8-209ENST00000510558 GKP32189 559 aa23.36■■□□□ 1.33
SNF8-209ENST00000510558 YBEYP58557 167 aaPredicted RBP23.36■■□□□ 1.33
SNF8-209ENST00000510558 SNRPD1P62314 119 aaKnown RBP23.36■■□□□ 1.33
SNF8-209ENST00000510558 FBXL19Q6PCT2 694 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms