RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 FARP1Q9Y4F1 1045 aaPredicted RBP11.96□□□□□ -0.49
HMGXB3-203ENST00000510472 EPN1Q9Y6I3 576 aaPredicted RBP11.96□□□□□ -0.49
HMGXB3-203ENST00000510472 SLCO1B1Q9Y6L6 691 aa11.96□□□□□ -0.49
HMGXB3-203ENST00000510472 NUMA1Q14980 2115 aa11.95□□□□□ -0.5
HMGXB3-203ENST00000510472 ATXN2Q99700 1313 aaKnown RBP11.95□□□□□ -0.5
HMGXB3-203ENST00000510472 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.95□□□□□ -0.5
HMGXB3-203ENST00000510472 ARHGAP42A6NI28 874 aa11.95□□□□□ -0.5
HMGXB3-203ENST00000510472 C1QTNF3-AMACRE9PGA6 284 aa11.95□□□□□ -0.5
HMGXB3-203ENST00000510472 DAPK3O43293 454 aa11.95□□□□□ -0.5
HMGXB3-203ENST00000510472 LATO43561 262 aa11.95□□□□□ -0.5
HMGXB3-203ENST00000510472 PLRG1O43660 514 aaKnown RBP11.95□□□□□ -0.5
HMGXB3-203ENST00000510472 BNIP3LO60238 219 aa11.95□□□□□ -0.5
HMGXB3-203ENST00000510472 LEFTY1O75610 366 aa11.95□□□□□ -0.5
HMGXB3-203ENST00000510472 TMCC1O94876 653 aa11.95□□□□□ -0.5
HMGXB3-203ENST00000510472 POP4O95707 220 aaKnown RBP11.95□□□□□ -0.5
HMGXB3-203ENST00000510472 PEX11BO96011 259 aa11.95□□□□□ -0.5
HMGXB3-203ENST00000510472 PRNPP04156 253 aa11.95□□□□□ -0.5
HMGXB3-203ENST00000510472 ARL4AP40617 200 aa11.95□□□□□ -0.5
HMGXB3-203ENST00000510472 MAGEA1P43355 309 aa11.95□□□□□ -0.5
HMGXB3-203ENST00000510472 CCR5P51681 352 aa11.95□□□□□ -0.5
HMGXB3-203ENST00000510472 CDH6P55285 790 aa11.95□□□□□ -0.5
HMGXB3-203ENST00000510472 MMRN1Q13201 1228 aa11.95□□□□□ -0.5
HMGXB3-203ENST00000510472 MESDQ14696 234 aa11.95□□□□□ -0.5
HMGXB3-203ENST00000510472 RSPO4Q2I0M5 234 aaPredicted RBP11.95□□□□□ -0.5
HMGXB3-203ENST00000510472 MYLK3Q32MK0 819 aa11.95□□□□□ -0.5
HMGXB3-203ENST00000510472 LRRC38Q5VT99 294 aa11.95□□□□□ -0.5
HMGXB3-203ENST00000510472 RABEPKQ7Z6M1 372 aa11.95□□□□□ -0.5
HMGXB3-203ENST00000510472 TMEM139Q8IV31 216 aa11.95□□□□□ -0.5
HMGXB3-203ENST00000510472 C12orf50Q8NA57 414 aaPredicted RBP11.95□□□□□ -0.5
HMGXB3-203ENST00000510472 OR2AP1Q8NGE2 309 aa11.95□□□□□ -0.5
HMGXB3-203ENST00000510472 NETO1Q8TDF5 533 aa11.95□□□□□ -0.5
HMGXB3-203ENST00000510472 GANCQ8TET4 914 aa11.95□□□□□ -0.5
HMGXB3-203ENST00000510472 FAF2Q96CS3 445 aa11.95□□□□□ -0.5
HMGXB3-203ENST00000510472 LRIG1Q96JA1 1093 aa11.95□□□□□ -0.5
HMGXB3-203ENST00000510472 CCDC114Q96M63 670 aa11.95□□□□□ -0.5
HMGXB3-203ENST00000510472 HDAC8Q9BY41 377 aa11.95□□□□□ -0.5
HMGXB3-203ENST00000510472 IMPACTQ9P2X3 320 aa11.95□□□□□ -0.5
HMGXB3-203ENST00000510472 HECAQ9UBI9 543 aaPredicted RBP11.95□□□□□ -0.5
HMGXB3-203ENST00000510472 LHX3Q9UBR4 397 aa11.95□□□□□ -0.5
HMGXB3-203ENST00000510472 IL36AQ9UHA7 158 aa11.95□□□□□ -0.5
HMGXB3-203ENST00000510472 EIF2B4Q9UI10 523 aaKnown RBP11.95□□□□□ -0.5
HMGXB3-203ENST00000510472 SLC6A14Q9UN76 642 aa11.95□□□□□ -0.5
HMGXB3-203ENST00000510472 REXO2Q9Y3B8 237 aaKnown RBP11.95□□□□□ -0.5
HMGXB3-203ENST00000510472 PCDHA13Q9Y5I0 950 aa11.95□□□□□ -0.5
HMGXB3-203ENST00000510472 CHD5Q8TDI0 1954 aa11.95□□□□□ -0.5
HMGXB3-203ENST00000510472 A0A1B0GTW7 788 aa11.94□□□□□ -0.5
HMGXB3-203ENST00000510472 SOWAHDA6NJG2 315 aa11.94□□□□□ -0.5
HMGXB3-203ENST00000510472 LRRC72A6NJI9 287 aa11.94□□□□□ -0.5
HMGXB3-203ENST00000510472 C3orf70A6NLC5 250 aaPredicted RBP11.94□□□□□ -0.5
HMGXB3-203ENST00000510472 SLC30A4O14863 429 aa11.94□□□□□ -0.5
HMGXB3-203ENST00000510472 NDUFA10O95299 355 aa11.94□□□□□ -0.5
HMGXB3-203ENST00000510472 KRT7P08729 469 aa11.94□□□□□ -0.5
HMGXB3-203ENST00000510472 SDHBP21912 280 aa11.94□□□□□ -0.5
HMGXB3-203ENST00000510472 CD27P26842 260 aa11.94□□□□□ -0.5
HMGXB3-203ENST00000510472 SLC1A1P43005 524 aa11.94□□□□□ -0.5
HMGXB3-203ENST00000510472 RECQLP46063 649 aaPredicted RBP11.94□□□□□ -0.5
HMGXB3-203ENST00000510472 BNC1Q01954 994 aa11.94□□□□□ -0.5
HMGXB3-203ENST00000510472 DPYSL3Q14195 570 aa11.94□□□□□ -0.5
HMGXB3-203ENST00000510472 PDK2Q15119 407 aa11.94□□□□□ -0.5
HMGXB3-203ENST00000510472 POM121L1PQ3SYA9 428 aa11.94□□□□□ -0.5
HMGXB3-203ENST00000510472 STPG1Q5TH74 334 aa11.94□□□□□ -0.5
HMGXB3-203ENST00000510472 TMCO3Q6UWJ1 677 aa11.94□□□□□ -0.5
HMGXB3-203ENST00000510472 RAD9BQ6WBX8 426 aa11.94□□□□□ -0.5
HMGXB3-203ENST00000510472 ARHGAP36Q6ZRI8 547 aa11.94□□□□□ -0.5
HMGXB3-203ENST00000510472 ERN2Q76MJ5 926 aaKnown RBP11.94□□□□□ -0.5
HMGXB3-203ENST00000510472 RGL4Q8IZJ4 473 aa11.94□□□□□ -0.5
HMGXB3-203ENST00000510472 NETO2Q8NC67 525 aa11.94□□□□□ -0.5
HMGXB3-203ENST00000510472 OR14C36Q8NHC7 312 aa11.94□□□□□ -0.5
HMGXB3-203ENST00000510472 PCDH19Q8TAB3 1148 aa11.94□□□□□ -0.5
HMGXB3-203ENST00000510472 RAPGEF5Q92565 580 aa11.94□□□□□ -0.5
HMGXB3-203ENST00000510472 TM6SF2Q9BZW4 377 aa11.94□□□□□ -0.5
HMGXB3-203ENST00000510472 SUSD2Q9UGT4 822 aa11.94□□□□□ -0.5
HMGXB3-203ENST00000510472 IPO11Q9UI26 975 aaKnown RBP11.94□□□□□ -0.5
HMGXB3-203ENST00000510472 TPX2Q9ULW0 747 aaKnown RBP11.94□□□□□ -0.5
HMGXB3-203ENST00000510472 TFR2Q9UP52 801 aa11.94□□□□□ -0.5
HMGXB3-203ENST00000510472 THADAQ6YHU6 1953 aa11.94□□□□□ -0.5
HMGXB3-203ENST00000510472 LAMA1P25391 3075 aa11.93□□□□□ -0.5
HMGXB3-203ENST00000510472 A0A0A6YYK5 440 aaPredicted RBP11.93□□□□□ -0.5
HMGXB3-203ENST00000510472 A0A1W2PPC4 97 aa11.93□□□□□ -0.5
HMGXB3-203ENST00000510472 RCCD1A6NED2 376 aa11.93□□□□□ -0.5
HMGXB3-203ENST00000510472 MEI4A8MW99 385 aa11.93□□□□□ -0.5
HMGXB3-203ENST00000510472 ZNF487B1APH4 448 aa11.93□□□□□ -0.5
HMGXB3-203ENST00000510472 KPNA3O00505 521 aaPredicted RBP11.93□□□□□ -0.5
HMGXB3-203ENST00000510472 ARHGAP33O14559 1287 aa11.93□□□□□ -0.5
HMGXB3-203ENST00000510472 BCAT2O15382 392 aaPredicted RBP11.93□□□□□ -0.5
HMGXB3-203ENST00000510472 MAFKO60675 156 aa11.93□□□□□ -0.5
HMGXB3-203ENST00000510472 GNSP15586 552 aa11.93□□□□□ -0.5
HMGXB3-203ENST00000510472 ENGP17813 658 aa11.93□□□□□ -0.5
HMGXB3-203ENST00000510472 ITGB7P26010 798 aa11.93□□□□□ -0.5
HMGXB3-203ENST00000510472 GKP32189 559 aa11.93□□□□□ -0.5
HMGXB3-203ENST00000510472 CYLC1P35663 651 aaPredicted RBP11.93□□□□□ -0.5
HMGXB3-203ENST00000510472 ID4P47928 161 aa11.93□□□□□ -0.5
HMGXB3-203ENST00000510472 CSNK1DP48730 415 aa11.93□□□□□ -0.5
HMGXB3-203ENST00000510472 DNA2P51530 1060 aa11.93□□□□□ -0.5
HMGXB3-203ENST00000510472 SNRPD1P62314 119 aaKnown RBP11.93□□□□□ -0.5
HMGXB3-203ENST00000510472 PPP2CBP62714 309 aa11.93□□□□□ -0.5
HMGXB3-203ENST00000510472 PPP2CAP67775 309 aa11.93□□□□□ -0.5
HMGXB3-203ENST00000510472 IL10RBQ08334 325 aa11.93□□□□□ -0.5
HMGXB3-203ENST00000510472 PUM1Q14671 1186 aaKnown RBP eCLIP11.93□□□□□ -0.5
HMGXB3-203ENST00000510472 PAFAH1B3Q15102 231 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms