RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 PTCD2Q8WV60 388 aaKnown RBP10.56□□□□□ -0.72
RFC1-211ENST00000509084 UCMAQ8WVF2 138 aa10.56□□□□□ -0.72
RFC1-211ENST00000509084 TTC17Q96AE7 1141 aa10.56□□□□□ -0.72
RFC1-211ENST00000509084 AGAP3Q96P47 875 aa10.56□□□□□ -0.72
RFC1-211ENST00000509084 FCRL5Q96RD9 977 aa10.56□□□□□ -0.72
RFC1-211ENST00000509084 PNKPQ96T60 521 aa10.56□□□□□ -0.72
RFC1-211ENST00000509084 MGME1Q9BQP7 344 aa10.56□□□□□ -0.72
RFC1-211ENST00000509084 PARD6BQ9BYG5 372 aa10.56□□□□□ -0.72
RFC1-211ENST00000509084 CEP41Q9BYV8 373 aa10.56□□□□□ -0.72
RFC1-211ENST00000509084 PHACTR1Q9C0D0 580 aa10.56□□□□□ -0.72
RFC1-211ENST00000509084 CEP44Q9C0F1 390 aa10.56□□□□□ -0.72
RFC1-211ENST00000509084 SLC25A51Q9H1U9 297 aa10.56□□□□□ -0.72
RFC1-211ENST00000509084 C8orf33Q9H7E9 229 aaPredicted RBP10.56□□□□□ -0.72
RFC1-211ENST00000509084 KCNK12Q9HB15 430 aa10.56□□□□□ -0.72
RFC1-211ENST00000509084 GLOD4Q9HC38 313 aa10.56□□□□□ -0.72
RFC1-211ENST00000509084 GRHL1Q9NZI5 618 aa10.56□□□□□ -0.72
RFC1-211ENST00000509084 THEGQ9P2T0 379 aa10.56□□□□□ -0.72
RFC1-211ENST00000509084 INTS6Q9UL03 887 aaKnown RBP10.56□□□□□ -0.72
RFC1-211ENST00000509084 CLEC4EQ9ULY5 219 aa10.56□□□□□ -0.72
RFC1-211ENST00000509084 HS3ST2Q9Y278 367 aa10.56□□□□□ -0.72
RFC1-211ENST00000509084 ATP8A1Q9Y2Q0 1164 aa10.56□□□□□ -0.72
RFC1-211ENST00000509084 NUP205Q92621 2012 aa10.56□□□□□ -0.72
RFC1-211ENST00000509084 SHROOM3Q8TF72 1996 aa10.56□□□□□ -0.72
RFC1-211ENST00000509084 ESYT3A0FGR9 886 aa10.55□□□□□ -0.72
RFC1-211ENST00000509084 CCDC151A5D8V7 595 aa10.55□□□□□ -0.72
RFC1-211ENST00000509084 LOC730098B7Z3J9 87 aa10.55□□□□□ -0.72
RFC1-211ENST00000509084 AP3B1O00203 1094 aa10.55□□□□□ -0.72
RFC1-211ENST00000509084 SNAP91O60641 907 aa10.55□□□□□ -0.72
RFC1-211ENST00000509084 TMCC1O94876 653 aa10.55□□□□□ -0.72
RFC1-211ENST00000509084 APODP05090 189 aa10.55□□□□□ -0.72
RFC1-211ENST00000509084 CISD3P0C7P0 127 aa10.55□□□□□ -0.72
RFC1-211ENST00000509084 GLULP15104 373 aa10.55□□□□□ -0.72
RFC1-211ENST00000509084 NFKB1P19838 968 aa10.55□□□□□ -0.72
RFC1-211ENST00000509084 PSMB4P28070 264 aa10.55□□□□□ -0.72
RFC1-211ENST00000509084 TNNT3P45378 269 aaPredicted RBP10.55□□□□□ -0.72
RFC1-211ENST00000509084 MAPK8P45983 427 aa10.55□□□□□ -0.72
RFC1-211ENST00000509084 LMAN1P49257 510 aa10.55□□□□□ -0.72
RFC1-211ENST00000509084 ITGA8P53708 1063 aa10.55□□□□□ -0.72
RFC1-211ENST00000509084 VSNL1P62760 191 aa10.55□□□□□ -0.72
RFC1-211ENST00000509084 ECT2LQ008S8 904 aa10.55□□□□□ -0.72
RFC1-211ENST00000509084 MPP3Q13368 585 aa10.55□□□□□ -0.72
RFC1-211ENST00000509084 BRD3Q15059 726 aa10.55□□□□□ -0.72
RFC1-211ENST00000509084 RNASEH2BQ5TBB1 312 aaKnown RBP10.55□□□□□ -0.72
RFC1-211ENST00000509084 ALG1LQ6GMV1 187 aa10.55□□□□□ -0.72
RFC1-211ENST00000509084 HIBCHQ6NVY1 386 aaPredicted RBP10.55□□□□□ -0.72
RFC1-211ENST00000509084 PRUNE1Q86TP1 453 aa10.55□□□□□ -0.72
RFC1-211ENST00000509084 ADIPOR2Q86V24 386 aa10.55□□□□□ -0.72
RFC1-211ENST00000509084 C12orf40Q86WS4 652 aa10.55□□□□□ -0.72
RFC1-211ENST00000509084 RALGPS2Q86X27 583 aaPredicted RBP10.55□□□□□ -0.72
RFC1-211ENST00000509084 KLHDC8BQ8IXV7 354 aa10.55□□□□□ -0.72
RFC1-211ENST00000509084 CNTD1Q8N815 330 aa10.55□□□□□ -0.72
RFC1-211ENST00000509084 TERB1Q8NA31 727 aa10.55□□□□□ -0.72
RFC1-211ENST00000509084 ATP11CQ8NB49 1132 aa10.55□□□□□ -0.72
RFC1-211ENST00000509084 KDM1BQ8NB78 822 aa10.55□□□□□ -0.72
RFC1-211ENST00000509084 IFT81Q8WYA0 676 aa10.55□□□□□ -0.72
RFC1-211ENST00000509084 ART4Q93070 314 aa10.55□□□□□ -0.72
RFC1-211ENST00000509084 ISG20Q96AZ6 181 aaKnown RBP10.55□□□□□ -0.72
RFC1-211ENST00000509084 RPP25Q9BUL9 199 aaKnown RBP10.55□□□□□ -0.72
RFC1-211ENST00000509084 ETNK1Q9HBU6 452 aa10.55□□□□□ -0.72
RFC1-211ENST00000509084 NT5MQ9NPB1 228 aa10.55□□□□□ -0.72
RFC1-211ENST00000509084 VPS45Q9NRW7 570 aa10.55□□□□□ -0.72
RFC1-211ENST00000509084 GTSE1Q9NYZ3 720 aa10.55□□□□□ -0.72
RFC1-211ENST00000509084 LIMD1Q9UGP4 676 aa10.55□□□□□ -0.72
RFC1-211ENST00000509084 ANAPC5Q9UJX4 755 aa10.55□□□□□ -0.72
RFC1-211ENST00000509084 TTLL3Q9Y4R7 772 aa10.55□□□□□ -0.72
RFC1-211ENST00000509084 OTOL1A6NHN0 477 aaPredicted RBP10.54□□□□□ -0.72
RFC1-211ENST00000509084 METTL18O95568 372 aa10.54□□□□□ -0.72
RFC1-211ENST00000509084 AP2A1O95782 977 aa10.54□□□□□ -0.72
RFC1-211ENST00000509084 CD160O95971 181 aa10.54□□□□□ -0.72
RFC1-211ENST00000509084 IGSF6O95976 241 aa10.54□□□□□ -0.72
RFC1-211ENST00000509084 APRTP07741 180 aa10.54□□□□□ -0.72
RFC1-211ENST00000509084 COL4A2P08572 1712 aa10.54□□□□□ -0.72
RFC1-211ENST00000509084 DLDP09622 509 aaKnown RBP10.54□□□□□ -0.72
RFC1-211ENST00000509084 SRFP11831 508 aa10.54□□□□□ -0.72
RFC1-211ENST00000509084 IL9P15248 144 aa10.54□□□□□ -0.72
RFC1-211ENST00000509084 CA4P22748 312 aa10.54□□□□□ -0.72
RFC1-211ENST00000509084 GLDCP23378 1020 aa10.54□□□□□ -0.72
RFC1-211ENST00000509084 CD68P34810 354 aaPredicted RBP10.54□□□□□ -0.72
RFC1-211ENST00000509084 OPRD1P41143 372 aa10.54□□□□□ -0.72
RFC1-211ENST00000509084 GRIA2P42262 883 aa10.54□□□□□ -0.72
RFC1-211ENST00000509084 CARSP49589 748 aaKnown RBP10.54□□□□□ -0.72
RFC1-211ENST00000509084 NRLP54845 237 aa10.54□□□□□ -0.72
RFC1-211ENST00000509084 PLTPP55058 493 aa10.54□□□□□ -0.72
RFC1-211ENST00000509084 RHOAP61586 193 aa10.54□□□□□ -0.72
RFC1-211ENST00000509084 ST8SIA6P61647 398 aa10.54□□□□□ -0.72
RFC1-211ENST00000509084 AP1S1P61966 158 aa10.54□□□□□ -0.72
RFC1-211ENST00000509084 ITKQ08881 620 aa10.54□□□□□ -0.72
RFC1-211ENST00000509084 NSUN2Q08J23 767 aaKnown RBP eCLIP10.54□□□□□ -0.72
RFC1-211ENST00000509084 TDGQ13569 410 aa10.54□□□□□ -0.72
RFC1-211ENST00000509084 KCNJ11Q14654 390 aa10.54□□□□□ -0.72
RFC1-211ENST00000509084 GEN1Q17RS7 908 aa10.54□□□□□ -0.72
RFC1-211ENST00000509084 NAPEPLDQ6IQ20 393 aa10.54□□□□□ -0.72
RFC1-211ENST00000509084 EMBQ6PCB8 327 aa10.54□□□□□ -0.72
RFC1-211ENST00000509084 CCNI2Q6ZMN8 369 aaPredicted RBP10.54□□□□□ -0.72
RFC1-211ENST00000509084 LINC00523Q86TU6 105 aa10.54□□□□□ -0.72
RFC1-211ENST00000509084 ADHFE1Q8IWW8 467 aa10.54□□□□□ -0.72
RFC1-211ENST00000509084 PHTF2Q8N3S3 785 aa10.54□□□□□ -0.72
RFC1-211ENST00000509084 SLC44A3Q8N4M1 653 aa10.54□□□□□ -0.72
RFC1-211ENST00000509084 SH2D3CQ8N5H7 860 aa10.54□□□□□ -0.72
RFC1-211ENST00000509084 PCDH20Q8N6Y1 951 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms