RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 JUNDP17535 347 aa9.6□□□□□ -0.87
NEDD9-211ENST00000508546 CCR1P32246 355 aa9.6□□□□□ -0.87
NEDD9-211ENST00000508546 RPIAP49247 311 aa9.6□□□□□ -0.87
NEDD9-211ENST00000508546 CLCN6P51797 869 aa9.6□□□□□ -0.87
NEDD9-211ENST00000508546 YWHAZP63104 245 aaKnown RBP9.6□□□□□ -0.87
NEDD9-211ENST00000508546 PITX1P78337 314 aaPredicted RBP9.6□□□□□ -0.87
NEDD9-211ENST00000508546 KRT83P78385 493 aa9.6□□□□□ -0.87
NEDD9-211ENST00000508546 FKBP3Q00688 224 aaKnown RBP9.6□□□□□ -0.87
NEDD9-211ENST00000508546 CENPCQ03188 943 aa9.6□□□□□ -0.87
NEDD9-211ENST00000508546 DNM1Q05193 864 aaKnown RBP9.6□□□□□ -0.87
NEDD9-211ENST00000508546 EIF3IQ13347 325 aaKnown RBP9.6□□□□□ -0.87
NEDD9-211ENST00000508546 AUHQ13825 339 aaKnown RBP9.6□□□□□ -0.87
NEDD9-211ENST00000508546 FGL2Q14314 439 aa9.6□□□□□ -0.87
NEDD9-211ENST00000508546 DEFB133Q30KQ1 61 aa9.6□□□□□ -0.87
NEDD9-211ENST00000508546 C5orf22Q49AR2 442 aa9.6□□□□□ -0.87
NEDD9-211ENST00000508546 PERM1Q5SV97 790 aa9.6□□□□□ -0.87
NEDD9-211ENST00000508546 FOXR1Q6PIV2 292 aa9.6□□□□□ -0.87
NEDD9-211ENST00000508546 USP53Q70EK8 1073 aa9.6□□□□□ -0.87
NEDD9-211ENST00000508546 TMEM110Q86TL2 294 aa9.6□□□□□ -0.87
NEDD9-211ENST00000508546 PPM1KQ8N3J5 372 aa9.6□□□□□ -0.87
NEDD9-211ENST00000508546 BTN2A2Q8WVV5 523 aa9.6□□□□□ -0.87
NEDD9-211ENST00000508546 EXTL1Q92935 676 aa9.6□□□□□ -0.87
NEDD9-211ENST00000508546 GLMNQ92990 594 aa9.6□□□□□ -0.87
NEDD9-211ENST00000508546 PPP1R16AQ96I34 528 aa9.6□□□□□ -0.87
NEDD9-211ENST00000508546 FEM1CQ96JP0 617 aa9.6□□□□□ -0.87
NEDD9-211ENST00000508546 TBATAQ96M53 351 aa9.6□□□□□ -0.87
NEDD9-211ENST00000508546 RPRD1AQ96P16 312 aaPredicted RBP9.6□□□□□ -0.87
NEDD9-211ENST00000508546 LENG8Q96PV6 779 aaPredicted RBP9.6□□□□□ -0.87
NEDD9-211ENST00000508546 MED15Q96RN5 788 aa9.6□□□□□ -0.87
NEDD9-211ENST00000508546 SLC17A9Q9BYT1 436 aa9.6□□□□□ -0.87
NEDD9-211ENST00000508546 METTL14Q9HCE5 456 aaKnown RBP9.6□□□□□ -0.87
NEDD9-211ENST00000508546 ARMCX3Q9UH62 379 aaPredicted RBP9.6□□□□□ -0.87
NEDD9-211ENST00000508546 SPENQ96T58 3664 aaKnown RBP9.6□□□□□ -0.87
NEDD9-211ENST00000508546 F8P00451 2351 aa9.6□□□□□ -0.87
NEDD9-211ENST00000508546 LMO7DNF2Z398 122 aa9.59□□□□□ -0.87
NEDD9-211ENST00000508546 RNF103O00237 685 aa9.59□□□□□ -0.87
NEDD9-211ENST00000508546 PLD2O14939 933 aa9.59□□□□□ -0.87
NEDD9-211ENST00000508546 MUSKO15146 869 aa9.59□□□□□ -0.87
NEDD9-211ENST00000508546 RAD51BO15315 384 aa9.59□□□□□ -0.87
NEDD9-211ENST00000508546 AP1G1O43747 822 aa9.59□□□□□ -0.87
NEDD9-211ENST00000508546 PAK4O96013 591 aaPredicted RBP9.59□□□□□ -0.87
NEDD9-211ENST00000508546 CALCAP01258 141 aa9.59□□□□□ -0.87
NEDD9-211ENST00000508546 SLC5A2P31639 672 aa9.59□□□□□ -0.87
NEDD9-211ENST00000508546 FMO5P49326 533 aa9.59□□□□□ -0.87
NEDD9-211ENST00000508546 IRAK1P51617 712 aa9.59□□□□□ -0.87
NEDD9-211ENST00000508546 NEK3P51956 506 aa9.59□□□□□ -0.87
NEDD9-211ENST00000508546 CDH4P55283 916 aa9.59□□□□□ -0.87
NEDD9-211ENST00000508546 FOXK1P85037 733 aa9.59□□□□□ -0.87
NEDD9-211ENST00000508546 CDK17Q00537 523 aa9.59□□□□□ -0.87
NEDD9-211ENST00000508546 SPIDRQ14159 915 aa9.59□□□□□ -0.87
NEDD9-211ENST00000508546 COBLL1Q53SF7 1204 aa9.59□□□□□ -0.87
NEDD9-211ENST00000508546 CRTC1Q6UUV9 634 aa9.59□□□□□ -0.87
NEDD9-211ENST00000508546 C14orf80Q86SX3 495 aa9.59□□□□□ -0.87
NEDD9-211ENST00000508546 HSCBQ8IWL3 235 aa9.59□□□□□ -0.87
NEDD9-211ENST00000508546 SLC35F3Q8IY50 421 aa9.59□□□□□ -0.87
NEDD9-211ENST00000508546 ATP11CQ8NB49 1132 aa9.59□□□□□ -0.87
NEDD9-211ENST00000508546 CHST14Q8NCH0 376 aa9.59□□□□□ -0.87
NEDD9-211ENST00000508546 DENND6BQ8NEG7 585 aa9.59□□□□□ -0.87
NEDD9-211ENST00000508546 LMX1AQ8TE12 382 aa9.59□□□□□ -0.87
NEDD9-211ENST00000508546 ASB12Q8WXK4 309 aa9.59□□□□□ -0.87
NEDD9-211ENST00000508546 KAT5Q92993 513 aa9.59□□□□□ -0.87
NEDD9-211ENST00000508546 PSMB7Q99436 277 aa9.59□□□□□ -0.87
NEDD9-211ENST00000508546 KLF6Q99612 283 aaPredicted RBP9.59□□□□□ -0.87
NEDD9-211ENST00000508546 ARHGAP9Q9BRR9 750 aa9.59□□□□□ -0.87
NEDD9-211ENST00000508546 C2orf49Q9BVC5 232 aaPredicted RBP9.59□□□□□ -0.87
NEDD9-211ENST00000508546 DDIT4Q9NX09 232 aa9.59□□□□□ -0.87
NEDD9-211ENST00000508546 SPASTQ9UBP0 616 aa9.59□□□□□ -0.87
NEDD9-211ENST00000508546 PLEKHB1Q9UF11 243 aaPredicted RBP9.59□□□□□ -0.87
NEDD9-211ENST00000508546 IL36AQ9UHA7 158 aa9.59□□□□□ -0.87
NEDD9-211ENST00000508546 IPO11Q9UI26 975 aaKnown RBP9.59□□□□□ -0.87
NEDD9-211ENST00000508546 VPS51Q9UID3 782 aa9.59□□□□□ -0.87
NEDD9-211ENST00000508546 VANGL2Q9ULK5 521 aa9.59□□□□□ -0.87
NEDD9-211ENST00000508546 CNTN6Q9UQ52 1028 aa9.59□□□□□ -0.87
NEDD9-211ENST00000508546 E5RJQ4 531 aa9.58□□□□□ -0.88
NEDD9-211ENST00000508546 TMX2-CTNND1H3BSU7 103 aa9.58□□□□□ -0.88
NEDD9-211ENST00000508546 K7ERQ8 282 aa9.58□□□□□ -0.88
NEDD9-211ENST00000508546 FPGTO14772 594 aa9.58□□□□□ -0.88
NEDD9-211ENST00000508546 SPINT1O43278 529 aa9.58□□□□□ -0.88
NEDD9-211ENST00000508546 SMAD6O43541 496 aaKnown RBP9.58□□□□□ -0.88
NEDD9-211ENST00000508546 SNAP91O60641 907 aa9.58□□□□□ -0.88
NEDD9-211ENST00000508546 LEFTY1O75610 366 aa9.58□□□□□ -0.88
NEDD9-211ENST00000508546 GLI1P08151 1106 aa9.58□□□□□ -0.88
NEDD9-211ENST00000508546 LIPCP11150 499 aa9.58□□□□□ -0.88
NEDD9-211ENST00000508546 ADRB3P13945 408 aa9.58□□□□□ -0.88
NEDD9-211ENST00000508546 RRM1P23921 792 aa9.58□□□□□ -0.88
NEDD9-211ENST00000508546 ITGB7P26010 798 aa9.58□□□□□ -0.88
NEDD9-211ENST00000508546 PRCPP42785 496 aa9.58□□□□□ -0.88
NEDD9-211ENST00000508546 NDUFA8P51970 172 aa9.58□□□□□ -0.88
NEDD9-211ENST00000508546 PFN3P60673 137 aa9.58□□□□□ -0.88
NEDD9-211ENST00000508546 GCNT1Q02742 428 aa9.58□□□□□ -0.88
NEDD9-211ENST00000508546 EIF2B5Q13144 721 aaKnown RBP9.58□□□□□ -0.88
NEDD9-211ENST00000508546 PDE1CQ14123 709 aaPredicted RBP9.58□□□□□ -0.88
NEDD9-211ENST00000508546 DRAP1Q14919 205 aaPredicted RBP9.58□□□□□ -0.88
NEDD9-211ENST00000508546 IGFBP7Q16270 282 aa9.58□□□□□ -0.88
NEDD9-211ENST00000508546 ARSIQ5FYB1 569 aa9.58□□□□□ -0.88
NEDD9-211ENST00000508546 KRBA2Q6ZNG9 492 aa9.58□□□□□ -0.88
NEDD9-211ENST00000508546 SMYD4Q8IYR2 804 aaPredicted RBP9.58□□□□□ -0.88
NEDD9-211ENST00000508546 FBXO39Q8N4B4 442 aa9.58□□□□□ -0.88
NEDD9-211ENST00000508546 DCAF4L2Q8NA75 395 aa9.58□□□□□ -0.88
NEDD9-211ENST00000508546 LMO3Q8TAP4 145 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms