RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 PSMD11O00231 422 aa7.4□□□□□ -1.23
UBE2D3-224ENST00000508474 MAP3K6O95382 1288 aa7.4□□□□□ -1.23
UBE2D3-224ENST00000508474 ITGB3P05106 788 aa7.4□□□□□ -1.23
UBE2D3-224ENST00000508474 NCAM1P13591 858 aa7.4□□□□□ -1.23
UBE2D3-224ENST00000508474 NCF1P14598 390 aaPredicted RBP7.4□□□□□ -1.23
UBE2D3-224ENST00000508474 PAICSP22234 425 aaKnown RBP7.4□□□□□ -1.23
UBE2D3-224ENST00000508474 PCSK1P29120 753 aa7.4□□□□□ -1.23
UBE2D3-224ENST00000508474 NNMTP40261 264 aa7.4□□□□□ -1.23
UBE2D3-224ENST00000508474 SEPHS1P49903 392 aa7.4□□□□□ -1.23
UBE2D3-224ENST00000508474 HADHBP55084 474 aaKnown RBP7.4□□□□□ -1.23
UBE2D3-224ENST00000508474 STX4Q12846 297 aa7.4□□□□□ -1.23
UBE2D3-224ENST00000508474 PWP1Q13610 501 aa7.4□□□□□ -1.23
UBE2D3-224ENST00000508474 SLC9A4Q6AI14 798 aa7.4□□□□□ -1.23
UBE2D3-224ENST00000508474 POTEHQ6S545 545 aa7.4□□□□□ -1.23
UBE2D3-224ENST00000508474 ZBTB46Q86UZ6 589 aa7.4□□□□□ -1.23
UBE2D3-224ENST00000508474 ZNF34Q8IZ26 560 aa7.4□□□□□ -1.23
UBE2D3-224ENST00000508474 TRPV1Q8NER1 839 aa7.4□□□□□ -1.23
UBE2D3-224ENST00000508474 FNDC8Q8TC99 324 aa7.4□□□□□ -1.23
UBE2D3-224ENST00000508474 FCGR1BQ92637 280 aa7.4□□□□□ -1.23
UBE2D3-224ENST00000508474 HSPBAP1Q96EW2 488 aa7.4□□□□□ -1.23
UBE2D3-224ENST00000508474 ZFP42Q96MM3 310 aa7.4□□□□□ -1.23
UBE2D3-224ENST00000508474 NODALQ96S42 347 aa7.4□□□□□ -1.23
UBE2D3-224ENST00000508474 SLITRK2Q9H156 845 aa7.4□□□□□ -1.23
UBE2D3-224ENST00000508474 UBP1Q9NZI7 540 aa7.4□□□□□ -1.23
UBE2D3-224ENST00000508474 AKAP7Q9P0M2 348 aaPredicted RBP7.4□□□□□ -1.23
UBE2D3-224ENST00000508474 IFT80Q9P2H3 777 aaPredicted RBP7.4□□□□□ -1.23
UBE2D3-224ENST00000508474 ARHGAP28Q9P2N2 729 aa7.4□□□□□ -1.23
UBE2D3-224ENST00000508474 NARFQ9UHQ1 456 aa7.4□□□□□ -1.23
UBE2D3-224ENST00000508474 DAGLAQ9Y4D2 1042 aa7.4□□□□□ -1.23
UBE2D3-224ENST00000508474 TNPO3Q9Y5L0 923 aaKnown RBP7.4□□□□□ -1.23
UBE2D3-224ENST00000508474 DGKBQ9Y6T7 804 aa7.4□□□□□ -1.23
UBE2D3-224ENST00000508474 PMF1-BGLAPU3KQ54 211 aa7.4□□□□□ -1.23
UBE2D3-224ENST00000508474 TCRBV5S4A2TA0A5A2 114 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 GSAPA4D1B5 854 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 SIGLEC16A6NMB1 481 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 CCNT2O60583 730 aaKnown RBP7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 NDUFS2O75306 463 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 TULP3O75386 442 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 LYPLA1O75608 230 aaPredicted RBP7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 JCHAINP01591 159 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 NR3C2P08235 984 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 PABPC4LP0CB38 370 aaKnown RBP7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 EPHA3P29320 983 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 MIPP30301 263 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 HSF2Q03933 536 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 ELP6Q0PNE2 266 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 LSAMPQ13449 338 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 CA9Q16790 459 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 SH3D19Q5HYK7 790 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 C6orf183Q5T699 404 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 LCN1P1Q5VSP4 162 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 KIAA1841Q6NSI8 718 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 VSTM1Q6UX27 236 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 SPATA2LQ8IUW3 424 aaPredicted RBP7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 SLC44A2Q8IWA5 706 aaPredicted RBP7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 METTL6Q8TCB7 284 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 SPATA33Q96N06 139 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 PDCD10Q9BUL8 212 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 GPR63Q9BZJ6 419 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 HSD3B7Q9H2F3 369 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 KAT8Q9H7Z6 458 aaKnown RBP7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 AASDHPPTQ9NRN7 309 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 DSEQ9UL01 958 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 GNB5O14775 395 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 TSPAN4O14817 238 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 TFECO14948 347 aaPredicted RBP7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 LRIG2O94898 1065 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 PCNAP12004 261 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 ZNF37AP17032 561 aaPredicted RBP7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 SDC2P34741 201 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 OR2B6P58173 313 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 BMT2Q1RMZ1 405 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 DCAF4L1Q3SXM0 396 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 LIN54Q6MZP7 749 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 PRR5LQ6MZQ0 368 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 SVOPLQ8N434 492 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 ANKRD52Q8NB46 1076 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 UXS1Q8NBZ7 420 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 BLOC1S5Q8TDH9 187 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 SHC3Q92529 594 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 LPGAT1Q92604 370 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 ROPN1LQ96C74 230 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 PHF12Q96QT6 1004 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 APBA2Q99767 749 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 MECRQ9BV79 373 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 CDHR5Q9HBB8 845 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 MAN1C1Q9NR34 630 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 PDGFCQ9NRA1 345 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 STK32BQ9NY57 414 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 TAS2R13Q9NYV9 303 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 EMC3Q9P0I2 261 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 SLC7A8Q9UHI5 535 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 LRFN2Q9ULH4 789 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 CORO2BQ9UQ03 480 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 LMTK2Q8IWU2 1503 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 GPR75-ASB3A0A0A6YYF3 556 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 H3BN98 237 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 RNASEH1O60930 286 aaKnown RBP7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 RPS6KA4O75676 772 aa7.39□□□□□ -1.23
UBE2D3-224ENST00000508474 EPN2O95208 641 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms