RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 MMP24Q9Y5R2 645 aa4.57□□□□□ -1.68
TRAPPC13-209ENST00000508304 LRRFIP2Q9Y608 721 aaKnown RBP4.57□□□□□ -1.68
TRAPPC13-209ENST00000508304 COPG1Q9Y678 874 aaKnown RBP4.57□□□□□ -1.68
TRAPPC13-209ENST00000508304 RRN3P2A6NIE6 340 aa4.56□□□□□ -1.68
TRAPPC13-209ENST00000508304 KCNJ18B7U540 433 aa4.56□□□□□ -1.68
TRAPPC13-209ENST00000508304 BMPR1BO00238 502 aa4.56□□□□□ -1.68
TRAPPC13-209ENST00000508304 VWA5AO00534 786 aa4.56□□□□□ -1.68
TRAPPC13-209ENST00000508304 BUB3O43684 328 aa4.56□□□□□ -1.68
TRAPPC13-209ENST00000508304 LIASO43766 372 aa4.56□□□□□ -1.68
TRAPPC13-209ENST00000508304 F7P08709 466 aaPredicted RBP4.56□□□□□ -1.68
TRAPPC13-209ENST00000508304 SLC16A2P36021 539 aa4.56□□□□□ -1.68
TRAPPC13-209ENST00000508304 ADPRHP54922 357 aa4.56□□□□□ -1.68
TRAPPC13-209ENST00000508304 IRX6P78412 446 aaPredicted RBP4.56□□□□□ -1.68
TRAPPC13-209ENST00000508304 TRAF3Q13114 568 aa4.56□□□□□ -1.68
TRAPPC13-209ENST00000508304 PTK2BQ14289 1009 aa4.56□□□□□ -1.68
TRAPPC13-209ENST00000508304 PLCB4Q15147 1175 aa4.56□□□□□ -1.68
TRAPPC13-209ENST00000508304 RPS6KA2Q15349 733 aa4.56□□□□□ -1.68
TRAPPC13-209ENST00000508304 TAF5Q15542 800 aa4.56□□□□□ -1.68
TRAPPC13-209ENST00000508304 TIGD6Q17RP2 521 aa4.56□□□□□ -1.68
TRAPPC13-209ENST00000508304 BTBD16Q32M84 506 aa4.56□□□□□ -1.68
TRAPPC13-209ENST00000508304 NME8Q8N427 588 aa4.56□□□□□ -1.68
TRAPPC13-209ENST00000508304 BICD2Q8TD16 824 aa4.56□□□□□ -1.68
TRAPPC13-209ENST00000508304 FAM216AQ8WUB2 273 aa4.56□□□□□ -1.68
TRAPPC13-209ENST00000508304 TMED6Q8WW62 240 aa4.56□□□□□ -1.68
TRAPPC13-209ENST00000508304 RTKNQ9BST9 563 aa4.56□□□□□ -1.68
TRAPPC13-209ENST00000508304 B3GNT4Q9C0J1 378 aa4.56□□□□□ -1.68
TRAPPC13-209ENST00000508304 IL25Q9H293 177 aa4.56□□□□□ -1.68
TRAPPC13-209ENST00000508304 OBP2BQ9NPH6 170 aa4.56□□□□□ -1.68
TRAPPC13-209ENST00000508304 ITM2CQ9NQX7 267 aa4.56□□□□□ -1.68
TRAPPC13-209ENST00000508304 SAGE1Q9NXZ1 904 aa4.56□□□□□ -1.68
TRAPPC13-209ENST00000508304 SLC25A13Q9UJS0 675 aa4.56□□□□□ -1.68
TRAPPC13-209ENST00000508304 BAG5Q9UL15 447 aa4.56□□□□□ -1.68
TRAPPC13-209ENST00000508304 CNTN6Q9UQ52 1028 aa4.56□□□□□ -1.68
TRAPPC13-209ENST00000508304 GPR52Q9Y2T5 361 aa4.56□□□□□ -1.68
TRAPPC13-209ENST00000508304 SCINQ9Y6U3 715 aa4.56□□□□□ -1.68
TRAPPC13-209ENST00000508304 AQP12BA6NM10 295 aa4.55□□□□□ -1.68
TRAPPC13-209ENST00000508304 SLC38A8A6NNN8 435 aa4.55□□□□□ -1.68
TRAPPC13-209ENST00000508304 LGALS16A8MUM7 142 aa4.55□□□□□ -1.68
TRAPPC13-209ENST00000508304 EIF3FO00303 357 aaPredicted RBP4.55□□□□□ -1.68
TRAPPC13-209ENST00000508304 PEPDP12955 493 aa4.55□□□□□ -1.68
TRAPPC13-209ENST00000508304 XBP1P17861 261 aa4.55□□□□□ -1.68
TRAPPC13-209ENST00000508304 TNFAIP3P21580 790 aa4.55□□□□□ -1.68
TRAPPC13-209ENST00000508304 PDIA3P30101 505 aaKnown RBP4.55□□□□□ -1.68
TRAPPC13-209ENST00000508304 TNFSF8P32971 234 aa4.55□□□□□ -1.68
TRAPPC13-209ENST00000508304 RCAN1P53805 252 aa4.55□□□□□ -1.68
TRAPPC13-209ENST00000508304 ARL4CP56559 192 aa4.55□□□□□ -1.68
TRAPPC13-209ENST00000508304 G3BP1Q13283 466 aaKnown RBP eCLIP4.55□□□□□ -1.68
TRAPPC13-209ENST00000508304 HNF4GQ14541 408 aa4.55□□□□□ -1.68
TRAPPC13-209ENST00000508304 ARL13AQ5H913 290 aaPredicted RBP4.55□□□□□ -1.68
TRAPPC13-209ENST00000508304 CEP85LQ5SZL2 805 aa4.55□□□□□ -1.68
TRAPPC13-209ENST00000508304 NFRKBQ6P4R8 1299 aa4.55□□□□□ -1.68
TRAPPC13-209ENST00000508304 DSTYKQ6XUX3 929 aa4.55□□□□□ -1.68
TRAPPC13-209ENST00000508304 RAB11FIP2Q7L804 512 aa4.55□□□□□ -1.68
TRAPPC13-209ENST00000508304 MDGA2Q7Z553 956 aa4.55□□□□□ -1.68
TRAPPC13-209ENST00000508304 CCDC25Q86WR0 208 aa4.55□□□□□ -1.68
TRAPPC13-209ENST00000508304 CCDC117Q8IWD4 279 aaPredicted RBP4.55□□□□□ -1.68
TRAPPC13-209ENST00000508304 GALNT15Q8N3T1 639 aa4.55□□□□□ -1.68
TRAPPC13-209ENST00000508304 DPP10Q8N608 796 aa4.55□□□□□ -1.68
TRAPPC13-209ENST00000508304 ENDOVQ8N8Q3 282 aaKnown RBP4.55□□□□□ -1.68
TRAPPC13-209ENST00000508304 STYXQ8WUJ0 223 aa4.55□□□□□ -1.68
TRAPPC13-209ENST00000508304 CPT1BQ92523 772 aa4.55□□□□□ -1.68
TRAPPC13-209ENST00000508304 IP6K1Q92551 441 aa4.55□□□□□ -1.68
TRAPPC13-209ENST00000508304 IGSF21Q96ID5 467 aa4.55□□□□□ -1.68
TRAPPC13-209ENST00000508304 UBXN10Q96LJ8 280 aa4.55□□□□□ -1.68
TRAPPC13-209ENST00000508304 FIZ1Q96SL8 496 aa4.55□□□□□ -1.68
TRAPPC13-209ENST00000508304 MECRQ9BV79 373 aa4.55□□□□□ -1.68
TRAPPC13-209ENST00000508304 ZNF304Q9HCX3 659 aa4.55□□□□□ -1.68
TRAPPC13-209ENST00000508304 SMC4Q9NTJ3 1288 aa4.55□□□□□ -1.68
TRAPPC13-209ENST00000508304 GRHPRQ9UBQ7 328 aa4.55□□□□□ -1.68
TRAPPC13-209ENST00000508304 FBXO4Q9UKT5 387 aa4.55□□□□□ -1.68
TRAPPC13-209ENST00000508304 LAS1LQ9Y4W2 734 aaKnown RBP4.55□□□□□ -1.68
TRAPPC13-209ENST00000508304 SLC4A4Q9Y6R1 1079 aa4.55□□□□□ -1.68
TRAPPC13-209ENST00000508304 TRBV5-7A0A0A0MS05 114 aa4.54□□□□□ -1.68
TRAPPC13-209ENST00000508304 J3KRW8 73 aa4.54□□□□□ -1.68
TRAPPC13-209ENST00000508304 HLA-DQA2P01906 255 aa4.54□□□□□ -1.68
TRAPPC13-209ENST00000508304 HOXB9P17482 250 aaPredicted RBP4.54□□□□□ -1.68
TRAPPC13-209ENST00000508304 KRT9P35527 623 aa4.54□□□□□ -1.68
TRAPPC13-209ENST00000508304 FAM3BP58499 235 aaPredicted RBP4.54□□□□□ -1.68
TRAPPC13-209ENST00000508304 GRSF1Q12849 480 aaKnown RBP eCLIP4.54□□□□□ -1.68
TRAPPC13-209ENST00000508304 PDE1CQ14123 709 aaPredicted RBP4.54□□□□□ -1.68
TRAPPC13-209ENST00000508304 SLC39A14Q15043 492 aa4.54□□□□□ -1.68
TRAPPC13-209ENST00000508304 POSTNQ15063 836 aa4.54□□□□□ -1.68
TRAPPC13-209ENST00000508304 HLFQ16534 295 aa4.54□□□□□ -1.68
TRAPPC13-209ENST00000508304 TRIM60Q495X7 471 aa4.54□□□□□ -1.68
TRAPPC13-209ENST00000508304 FAAH2Q6GMR7 532 aa4.54□□□□□ -1.68
TRAPPC13-209ENST00000508304 KLHL17Q6TDP4 642 aa4.54□□□□□ -1.68
TRAPPC13-209ENST00000508304 CYP26C1Q6V0L0 522 aa4.54□□□□□ -1.68
TRAPPC13-209ENST00000508304 FJX1Q86VR8 437 aa4.54□□□□□ -1.68
TRAPPC13-209ENST00000508304 TMEM200AQ86VY9 491 aa4.54□□□□□ -1.68
TRAPPC13-209ENST00000508304 PDILTQ8N807 584 aa4.54□□□□□ -1.68
TRAPPC13-209ENST00000508304 OR14A16Q8NHC5 309 aa4.54□□□□□ -1.68
TRAPPC13-209ENST00000508304 USP13Q92995 863 aaPredicted RBP4.54□□□□□ -1.68
TRAPPC13-209ENST00000508304 EID2BQ96D98 161 aa4.54□□□□□ -1.68
TRAPPC13-209ENST00000508304 APOLD1Q96LR9 279 aa4.54□□□□□ -1.68
TRAPPC13-209ENST00000508304 SEC62Q99442 399 aaKnown RBP4.54□□□□□ -1.68
TRAPPC13-209ENST00000508304 SLC26A6Q9BXS9 759 aa4.54□□□□□ -1.68
TRAPPC13-209ENST00000508304 ARL15Q9NXU5 204 aa4.54□□□□□ -1.68
TRAPPC13-209ENST00000508304 PGAP2Q9UHJ9 254 aa4.54□□□□□ -1.68
TRAPPC13-209ENST00000508304 HERC5Q9UII4 1024 aaKnown RBP4.54□□□□□ -1.68
TRAPPC13-209ENST00000508304 PCDHA10Q9Y5I2 948 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms