RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 TPX2Q9ULW0 747 aaKnown RBP14.56□□□□□ -0.08
RAB28-205ENST00000508274 TDRD6O60522 2096 aaKnown RBP14.56□□□□□ -0.08
RAB28-205ENST00000508274 COL5A1P20908 1838 aaPredicted RBP14.56□□□□□ -0.08
RAB28-205ENST00000508274 ARID1BQ8NFD5 2236 aaPredicted RBP14.56□□□□□ -0.08
RAB28-205ENST00000508274 A0A1W2PQU0 124 aa14.56□□□□□ -0.08
RAB28-205ENST00000508274 FAM221BA6H8Z2 402 aa14.56□□□□□ -0.08
RAB28-205ENST00000508274 TMCO5BA8MYB1 307 aa14.56□□□□□ -0.08
RAB28-205ENST00000508274 SLC31A1O15431 190 aa14.56□□□□□ -0.08
RAB28-205ENST00000508274 GKP32189 559 aa14.56□□□□□ -0.08
RAB28-205ENST00000508274 CCNHP51946 323 aaPredicted RBP14.56□□□□□ -0.08
RAB28-205ENST00000508274 ACAD10Q6JQN1 1059 aa14.56□□□□□ -0.08
RAB28-205ENST00000508274 ERN2Q76MJ5 926 aaKnown RBP14.56□□□□□ -0.08
RAB28-205ENST00000508274 MFSD2AQ8NA29 543 aa14.56□□□□□ -0.08
RAB28-205ENST00000508274 NAP1L5Q96NT1 182 aaPredicted RBP14.56□□□□□ -0.08
RAB28-205ENST00000508274 FUCA2Q9BTY2 467 aa14.56□□□□□ -0.08
RAB28-205ENST00000508274 NOL6Q9H6R4 1146 aaKnown RBP14.56□□□□□ -0.08
RAB28-205ENST00000508274 ZFR2Q9UPR6 939 aaKnown RBP14.56□□□□□ -0.08
RAB28-205ENST00000508274 DMTF1Q9Y222 760 aa14.56□□□□□ -0.08
RAB28-205ENST00000508274 GOLGA4Q13439 2230 aaKnown RBP14.55□□□□□ -0.08
RAB28-205ENST00000508274 SMTNL1A8MU46 457 aa14.55□□□□□ -0.08
RAB28-205ENST00000508274 DFNA5O60443 496 aa14.55□□□□□ -0.08
RAB28-205ENST00000508274 RAMP2O60895 175 aa14.55□□□□□ -0.08
RAB28-205ENST00000508274 DKK1O94907 266 aa14.55□□□□□ -0.08
RAB28-205ENST00000508274 TNFAIP3P21580 790 aa14.55□□□□□ -0.08
RAB28-205ENST00000508274 ZNF165P49910 485 aa14.55□□□□□ -0.08
RAB28-205ENST00000508274 SLC20A2Q08357 652 aa14.55□□□□□ -0.08
RAB28-205ENST00000508274 BNIP3Q12983 259 aa14.55□□□□□ -0.08
RAB28-205ENST00000508274 ZNF284Q2VY69 593 aa14.55□□□□□ -0.08
RAB28-205ENST00000508274 SETMARQ53H47 684 aaPredicted RBP14.55□□□□□ -0.08
RAB28-205ENST00000508274 SLC45A4Q5BKX6 768 aa14.55□□□□□ -0.08
RAB28-205ENST00000508274 CARD16Q5EG05 197 aa14.55□□□□□ -0.08
RAB28-205ENST00000508274 SEL1L3Q68CR1 1132 aa14.55□□□□□ -0.08
RAB28-205ENST00000508274 KDF1Q8NAX2 398 aaPredicted RBP14.55□□□□□ -0.08
RAB28-205ENST00000508274 NETO2Q8NC67 525 aa14.55□□□□□ -0.08
RAB28-205ENST00000508274 SAP25Q8TEE9 199 aa14.55□□□□□ -0.08
RAB28-205ENST00000508274 HEPHQ9BQS7 1158 aa14.55□□□□□ -0.08
RAB28-205ENST00000508274 HDAC8Q9BY41 377 aa14.55□□□□□ -0.08
RAB28-205ENST00000508274 KLC2Q9H0B6 622 aa14.55□□□□□ -0.08
RAB28-205ENST00000508274 ZDHHC6Q9H6R6 413 aa14.55□□□□□ -0.08
RAB28-205ENST00000508274 CAAP1Q9H8G2 361 aa14.55□□□□□ -0.08
RAB28-205ENST00000508274 FZD10Q9ULW2 581 aa14.55□□□□□ -0.08
RAB28-205ENST00000508274 A0A1B0GTH6 734 aa14.54□□□□□ -0.08
RAB28-205ENST00000508274 PRAMEF26H0Y7S4 382 aa14.54□□□□□ -0.08
RAB28-205ENST00000508274 CREB3O43889 395 aa14.54□□□□□ -0.08
RAB28-205ENST00000508274 PCDH8O95206 1070 aa14.54□□□□□ -0.08
RAB28-205ENST00000508274 CCDC172P0C7W6 258 aa14.54□□□□□ -0.08
RAB28-205ENST00000508274 EPHA8P29322 1005 aaPredicted RBP14.54□□□□□ -0.08
RAB28-205ENST00000508274 EPHB2P29323 1055 aa14.54□□□□□ -0.08
RAB28-205ENST00000508274 L1CAMP32004 1257 aa14.54□□□□□ -0.08
RAB28-205ENST00000508274 ETFBP38117 255 aa14.54□□□□□ -0.08
RAB28-205ENST00000508274 IQCB1Q15051 598 aa14.54□□□□□ -0.08
RAB28-205ENST00000508274 POLD3Q15054 466 aaPredicted RBP14.54□□□□□ -0.08
RAB28-205ENST00000508274 CCDC157Q569K6 752 aa14.54□□□□□ -0.08
RAB28-205ENST00000508274 EFHC2Q5JST6 749 aa14.54□□□□□ -0.08
RAB28-205ENST00000508274 DCUN1D2Q6PH85 259 aa14.54□□□□□ -0.08
RAB28-205ENST00000508274 PARS2Q7L3T8 475 aaKnown RBP14.54□□□□□ -0.08
RAB28-205ENST00000508274 HORMAD1Q86X24 394 aa14.54□□□□□ -0.08
RAB28-205ENST00000508274 MARCH9Q86YJ5 346 aa14.54□□□□□ -0.08
RAB28-205ENST00000508274 RTL3Q8N8U3 475 aaKnown RBP14.54□□□□□ -0.08
RAB28-205ENST00000508274 TMEM145Q8NBT3 493 aa14.54□□□□□ -0.08
RAB28-205ENST00000508274 ZCCHC14Q8WYQ9 949 aaKnown RBP14.54□□□□□ -0.08
RAB28-205ENST00000508274 VOPP1Q96AW1 172 aa14.54□□□□□ -0.08
RAB28-205ENST00000508274 PPP1R16AQ96I34 528 aa14.54□□□□□ -0.08
RAB28-205ENST00000508274 CNPY3Q9BT09 278 aa14.54□□□□□ -0.08
RAB28-205ENST00000508274 MAGEH1Q9H213 219 aa14.54□□□□□ -0.08
RAB28-205ENST00000508274 GPATCH2LQ9NWQ4 482 aa14.54□□□□□ -0.08
RAB28-205ENST00000508274 HECAQ9UBI9 543 aaPredicted RBP14.54□□□□□ -0.08
RAB28-205ENST00000508274 FTSJ1Q9UET6 329 aa14.54□□□□□ -0.08
RAB28-205ENST00000508274 MYO6Q9UM54 1294 aa14.54□□□□□ -0.08
RAB28-205ENST00000508274 LAMA5O15230 3695 aa14.53□□□□□ -0.08
RAB28-205ENST00000508274 TNFSF14O43557 240 aa14.53□□□□□ -0.08
RAB28-205ENST00000508274 ITGAVP06756 1048 aa14.53□□□□□ -0.08
RAB28-205ENST00000508274 ADRB3P13945 408 aa14.53□□□□□ -0.08
RAB28-205ENST00000508274 ITGB7P26010 798 aa14.53□□□□□ -0.08
RAB28-205ENST00000508274 NUDT1P36639 197 aa14.53□□□□□ -0.08
RAB28-205ENST00000508274 ARRB1P49407 418 aaPredicted RBP14.53□□□□□ -0.08
RAB28-205ENST00000508274 NEK3P51956 506 aa14.53□□□□□ -0.08
RAB28-205ENST00000508274 MAMLD1Q13495 774 aa14.53□□□□□ -0.08
RAB28-205ENST00000508274 FGL2Q14314 439 aa14.53□□□□□ -0.08
RAB28-205ENST00000508274 STAT4Q14765 748 aa14.53□□□□□ -0.08
RAB28-205ENST00000508274 ASIC2Q16515 512 aa14.53□□□□□ -0.08
RAB28-205ENST00000508274 FILIP1LQ4L180 1135 aa14.53□□□□□ -0.08
RAB28-205ENST00000508274 ZNF571Q7Z3V5 609 aaPredicted RBP14.53□□□□□ -0.08
RAB28-205ENST00000508274 TMC6Q7Z403 805 aa14.53□□□□□ -0.08
RAB28-205ENST00000508274 RYBPQ8N488 228 aaPredicted RBP14.53□□□□□ -0.08
RAB28-205ENST00000508274 TRIM7Q9C029 511 aa14.53□□□□□ -0.08
RAB28-205ENST00000508274 TTYH3Q9C0H2 523 aa14.53□□□□□ -0.08
RAB28-205ENST00000508274 HAUS4Q9H6D7 363 aa14.53□□□□□ -0.08
RAB28-205ENST00000508274 RETREG1Q9H6L5 497 aa14.53□□□□□ -0.08
RAB28-205ENST00000508274 ANKRD62A6NC57 917 aa14.52□□□□□ -0.08
RAB28-205ENST00000508274 KDELR3O43731 214 aa14.52□□□□□ -0.08
RAB28-205ENST00000508274 SDC3O75056 442 aa14.52□□□□□ -0.08
RAB28-205ENST00000508274 TMCC1O94876 653 aa14.52□□□□□ -0.08
RAB28-205ENST00000508274 CLDN2P57739 230 aa14.52□□□□□ -0.08
RAB28-205ENST00000508274 INAVAQ3KP66 663 aa14.52□□□□□ -0.08
RAB28-205ENST00000508274 TMEM259Q4ZIN3 620 aa14.52□□□□□ -0.08
RAB28-205ENST00000508274 ATXN7L2Q5T6C5 722 aaPredicted RBP14.52□□□□□ -0.08
RAB28-205ENST00000508274 NEK5Q6P3R8 708 aa14.52□□□□□ -0.08
RAB28-205ENST00000508274 GCNT7Q6ZNI0 430 aa14.52□□□□□ -0.08
RAB28-205ENST00000508274 KANSL1Q7Z3B3 1105 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms