RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 KIAA0930Q6ICG6 404 aaPredicted RBP17.91■□□□□ 0.46
SFXN1-208ENST00000507823 SLC39A5Q6ZMH5 540 aa17.91■□□□□ 0.46
SFXN1-208ENST00000507823 TBC1D1Q86TI0 1168 aaPredicted RBP17.91■□□□□ 0.46
SFXN1-208ENST00000507823 MTDHQ86UE4 582 aaKnown RBP17.91■□□□□ 0.46
SFXN1-208ENST00000507823 MIB1Q86YT6 1006 aa17.91■□□□□ 0.46
SFXN1-208ENST00000507823 PDZD8Q8NEN9 1154 aa17.91■□□□□ 0.46
SFXN1-208ENST00000507823 AZIN2Q96A70 460 aa17.91■□□□□ 0.46
SFXN1-208ENST00000507823 C20orf27Q9GZN8 174 aa17.91■□□□□ 0.46
SFXN1-208ENST00000507823 LNPEPQ9UIQ6 1025 aa17.91■□□□□ 0.46
SFXN1-208ENST00000507823 A0A0G2JND7 137 aa17.91■□□□□ 0.46
SFXN1-208ENST00000507823 SERINC3Q13530 473 aa17.91■□□□□ 0.46
SFXN1-208ENST00000507823 MARC1Q5VT66 337 aa17.91■□□□□ 0.46
SFXN1-208ENST00000507823 CMC1Q7Z7K0 106 aa17.91■□□□□ 0.46
SFXN1-208ENST00000507823 PARP9Q8IXQ6 854 aa17.91■□□□□ 0.46
SFXN1-208ENST00000507823 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.91■□□□□ 0.46
SFXN1-208ENST00000507823 VWCEQ96DN2 955 aa17.91■□□□□ 0.46
SFXN1-208ENST00000507823 COPG2Q9UBF2 871 aa17.91■□□□□ 0.46
SFXN1-208ENST00000507823 HEY2Q9UBP5 337 aa17.91■□□□□ 0.46
SFXN1-208ENST00000507823 MIA3Q5JRA6 1907 aa17.91■□□□□ 0.46
SFXN1-208ENST00000507823 UGP2Q16851 508 aa17.9■□□□□ 0.46
SFXN1-208ENST00000507823 TAF1BQ53T94 588 aaPredicted RBP17.9■□□□□ 0.46
SFXN1-208ENST00000507823 SUGP1Q8IWZ8 645 aaKnown RBP17.9■□□□□ 0.46
SFXN1-208ENST00000507823 SLC7A6OSQ96CW6 309 aaPredicted RBP17.9■□□□□ 0.46
SFXN1-208ENST00000507823 IGSF21Q96ID5 467 aa17.9■□□□□ 0.46
SFXN1-208ENST00000507823 TUBB6Q9BUF5 446 aa17.9■□□□□ 0.46
SFXN1-208ENST00000507823 AFF4Q9UHB7 1163 aaKnown RBP17.9■□□□□ 0.46
SFXN1-208ENST00000507823 LTBP2Q14767 1821 aa17.9■□□□□ 0.46
SFXN1-208ENST00000507823 SERPINE1P05121 402 aa17.9■□□□□ 0.46
SFXN1-208ENST00000507823 MYL2P10916 166 aa17.9■□□□□ 0.46
SFXN1-208ENST00000507823 TACR2P21452 398 aa17.9■□□□□ 0.46
SFXN1-208ENST00000507823 GRK2P25098 689 aa17.9■□□□□ 0.46
SFXN1-208ENST00000507823 GABRB3P28472 473 aa17.9■□□□□ 0.46
SFXN1-208ENST00000507823 SLC10A7Q0GE19 358 aa17.9■□□□□ 0.46
SFXN1-208ENST00000507823 BTG3Q14201 252 aaPredicted RBP17.9■□□□□ 0.46
SFXN1-208ENST00000507823 CRLF3Q8IUI8 442 aa17.9■□□□□ 0.46
SFXN1-208ENST00000507823 GIPC2Q8TF65 315 aa17.9■□□□□ 0.46
SFXN1-208ENST00000507823 FSD1LQ9BXM9 530 aa17.9■□□□□ 0.46
SFXN1-208ENST00000507823 ANKRD6Q9Y2G4 727 aa17.9■□□□□ 0.46
SFXN1-208ENST00000507823 RAMP2O60895 175 aa17.89■□□□□ 0.46
SFXN1-208ENST00000507823 PMPCBO75439 489 aa17.89■□□□□ 0.46
SFXN1-208ENST00000507823 ABLIM3O94929 683 aa17.89■□□□□ 0.46
SFXN1-208ENST00000507823 PAPSS2O95340 614 aaPredicted RBP17.89■□□□□ 0.46
SFXN1-208ENST00000507823 C2P06681 752 aa17.89■□□□□ 0.46
SFXN1-208ENST00000507823 ALDH7A1P49419 539 aaKnown RBP17.89■□□□□ 0.46
SFXN1-208ENST00000507823 CCL23P55773 120 aa17.89■□□□□ 0.46
SFXN1-208ENST00000507823 POU6F1Q14863 301 aa17.89■□□□□ 0.46
SFXN1-208ENST00000507823 KRT72Q14CN4 511 aa17.89■□□□□ 0.46
SFXN1-208ENST00000507823 ESRP1Q6NXG1 681 aaKnown RBP17.89■□□□□ 0.46
SFXN1-208ENST00000507823 ARRDC2Q8TBH0 407 aa17.89■□□□□ 0.46
SFXN1-208ENST00000507823 MAGEC3Q8TD91 643 aa17.89■□□□□ 0.46
SFXN1-208ENST00000507823 PSMG2Q969U7 264 aa17.89■□□□□ 0.46
SFXN1-208ENST00000507823 MYEOVQ96EZ4 313 aa17.89■□□□□ 0.46
SFXN1-208ENST00000507823 MYRFLQ96LU7 910 aa17.89■□□□□ 0.46
SFXN1-208ENST00000507823 SP110Q9HB58 689 aa17.89■□□□□ 0.46
SFXN1-208ENST00000507823 PDFQ9HBH1 243 aa17.89■□□□□ 0.46
SFXN1-208ENST00000507823 DNMT3LQ9UJW3 386 aa17.89■□□□□ 0.46
SFXN1-208ENST00000507823 A0A096LPK6 155 aa17.89■□□□□ 0.45
SFXN1-208ENST00000507823 IHHQ14623 411 aa17.89■□□□□ 0.45
SFXN1-208ENST00000507823 POLD3Q15054 466 aaPredicted RBP17.89■□□□□ 0.45
SFXN1-208ENST00000507823 ALG1LQ6GMV1 187 aa17.89■□□□□ 0.45
SFXN1-208ENST00000507823 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.89■□□□□ 0.456e-7■■■■□ 19.3
SFXN1-208ENST00000507823 CCDC91Q7Z6B0 441 aa17.89■□□□□ 0.45
SFXN1-208ENST00000507823 PLD6Q8N2A8 252 aaKnown RBP17.89■□□□□ 0.45
SFXN1-208ENST00000507823 ZNF599Q96NL3 588 aa17.89■□□□□ 0.45
SFXN1-208ENST00000507823 RPRD1AQ96P16 312 aaPredicted RBP17.89■□□□□ 0.45
SFXN1-208ENST00000507823 TLE6Q9H808 572 aa17.89■□□□□ 0.45
SFXN1-208ENST00000507823 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.89■□□□□ 0.45
SFXN1-208ENST00000507823 HGSO14964 777 aaPredicted RBP17.88■□□□□ 0.45
SFXN1-208ENST00000507823 PRAMEF11O60813 436 aa17.88■□□□□ 0.45
SFXN1-208ENST00000507823 KRT16P08779 473 aa17.88■□□□□ 0.45
SFXN1-208ENST00000507823 CCL5P13501 91 aa17.88■□□□□ 0.45
SFXN1-208ENST00000507823 HMGA1P17096 107 aaKnown RBP17.88■□□□□ 0.45
SFXN1-208ENST00000507823 GRM3Q14832 879 aa17.88■□□□□ 0.45
SFXN1-208ENST00000507823 CNKSR3Q6P9H4 555 aa17.88■□□□□ 0.45
SFXN1-208ENST00000507823 C1QTNF1Q9BXJ1 281 aa17.88■□□□□ 0.45
SFXN1-208ENST00000507823 STN1Q9H668 368 aaKnown RBP17.88■□□□□ 0.45
SFXN1-208ENST00000507823 NT5MQ9NPB1 228 aa17.88■□□□□ 0.45
SFXN1-208ENST00000507823 TBX21Q9UL17 535 aa17.88■□□□□ 0.45
SFXN1-208ENST00000507823 TRIM33Q9UPN9 1127 aa17.88■□□□□ 0.45
SFXN1-208ENST00000507823 CCDC195A0A1B0GUA6 201 aa17.88■□□□□ 0.45
SFXN1-208ENST00000507823 LOC285095A0A1B0GVY8 99 aa17.88■□□□□ 0.45
SFXN1-208ENST00000507823 ZNF840PA6NDX5 716 aa17.88■□□□□ 0.45
SFXN1-208ENST00000507823 ACSL4O60488 711 aa17.88■□□□□ 0.45
SFXN1-208ENST00000507823 NEBLO76041 1014 aa17.88■□□□□ 0.45
SFXN1-208ENST00000507823 AHSGP02765 367 aa17.88■□□□□ 0.45
SFXN1-208ENST00000507823 PAMP19021 973 aa17.88■□□□□ 0.45
SFXN1-208ENST00000507823 TARSP26639 723 aaKnown RBP17.88■□□□□ 0.45
SFXN1-208ENST00000507823 ATP5C1P36542 298 aaKnown RBP17.88■□□□□ 0.45
SFXN1-208ENST00000507823 HARS2P49590 506 aaKnown RBP17.88■□□□□ 0.45
SFXN1-208ENST00000507823 RASSF2P50749 326 aa17.88■□□□□ 0.45
SFXN1-208ENST00000507823 SMAD1Q15797 465 aaKnown RBP17.88■□□□□ 0.45
SFXN1-208ENST00000507823 GALNT7Q86SF2 657 aa17.88■□□□□ 0.45
SFXN1-208ENST00000507823 PGBD5Q8N414 524 aa17.88■□□□□ 0.45
SFXN1-208ENST00000507823 C2CD4AQ8NCU7 369 aaPredicted RBP17.88■□□□□ 0.45
SFXN1-208ENST00000507823 ACVR1CQ8NER5 493 aa17.88■□□□□ 0.45
SFXN1-208ENST00000507823 PTCD3Q96EY7 689 aaKnown RBP17.88■□□□□ 0.45
SFXN1-208ENST00000507823 CLSTN3Q9BQT9 956 aa17.88■□□□□ 0.45
SFXN1-208ENST00000507823 CRISPLD2Q9H0B8 497 aa17.88■□□□□ 0.45
SFXN1-208ENST00000507823 ZNF395Q9H8N7 513 aaPredicted RBP17.88■□□□□ 0.45
SFXN1-208ENST00000507823 MRPL42Q9Y6G3 142 aaKnown RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms