RNA–Protein interactions for RNA: ENST00000506747.5

CLOCK-205, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 1,337 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-205ENST00000506747 E5RJQ4 531 aa4.35□□□□□ -1.71
CLOCK-205ENST00000506747 PPP6CO00743 305 aa4.35□□□□□ -1.71
CLOCK-205ENST00000506747 HBP1O60381 514 aa4.35□□□□□ -1.71
CLOCK-205ENST00000506747 TLR2O60603 784 aa4.35□□□□□ -1.71
CLOCK-205ENST00000506747 USP12O75317 370 aa4.35□□□□□ -1.71
CLOCK-205ENST00000506747 TOP3BO95985 862 aaKnown RBP4.35□□□□□ -1.71
CLOCK-205ENST00000506747 HEXAP06865 529 aa4.35□□□□□ -1.71
CLOCK-205ENST00000506747 FGF2P09038 288 aa4.35□□□□□ -1.71
CLOCK-205ENST00000506747 LAMP2P13473 410 aa4.35□□□□□ -1.71
CLOCK-205ENST00000506747 PSMA4P25789 261 aaKnown RBP4.35□□□□□ -1.71
CLOCK-205ENST00000506747 RYKP34925 604 aa4.35□□□□□ -1.71
CLOCK-205ENST00000506747 CENPAP49450 140 aa4.35□□□□□ -1.71
CLOCK-205ENST00000506747 SLC18A2Q05940 514 aa4.35□□□□□ -1.71
CLOCK-205ENST00000506747 SRSF1Q07955 248 aaKnown RBP eCLIP4.35□□□□□ -1.71
CLOCK-205ENST00000506747 TBCEQ15813 527 aaPredicted RBP4.35□□□□□ -1.71
CLOCK-205ENST00000506747 ME3Q16798 604 aa4.35□□□□□ -1.71
CLOCK-205ENST00000506747 SLC45A4Q5BKX6 768 aa4.35□□□□□ -1.71
CLOCK-205ENST00000506747 PIK3CD-AS1Q5SR53 167 aa4.35□□□□□ -1.71
CLOCK-205ENST00000506747 CCDC30Q5VVM6 783 aa4.35□□□□□ -1.71
CLOCK-205ENST00000506747 CFAP161Q6P656 301 aa4.35□□□□□ -1.71
CLOCK-205ENST00000506747 TMEM81Q6P7N7 255 aa4.35□□□□□ -1.71
CLOCK-205ENST00000506747 SLC22A25Q6T423 547 aa4.35□□□□□ -1.71
CLOCK-205ENST00000506747 KDELC2Q7Z4H8 507 aa4.35□□□□□ -1.71
CLOCK-205ENST00000506747 YTHDF3Q7Z739 585 aaKnown RBP4.35□□□□□ -1.71
CLOCK-205ENST00000506747 WDR5BQ86VZ2 330 aa4.35□□□□□ -1.71
CLOCK-205ENST00000506747 UCMAQ8WVF2 138 aa4.35□□□□□ -1.71
CLOCK-205ENST00000506747 MPHOSPH8Q99549 860 aa4.35□□□□□ -1.71
CLOCK-205ENST00000506747 SH2D3AQ9BRG2 576 aa4.35□□□□□ -1.71
CLOCK-205ENST00000506747 KRTAP1-5Q9BYS1 174 aa4.35□□□□□ -1.71
CLOCK-205ENST00000506747 SLC32A1Q9H598 525 aa4.35□□□□□ -1.71
CLOCK-205ENST00000506747 PAPOLBQ9NRJ5 636 aaKnown RBP4.35□□□□□ -1.71
CLOCK-205ENST00000506747 PEMTQ9UBM1 199 aa4.35□□□□□ -1.71
CLOCK-205ENST00000506747 A0A1W2PQF6 199 aa4.34□□□□□ -1.71
CLOCK-205ENST00000506747 ZNF814B7Z6K7 855 aa4.34□□□□□ -1.71
CLOCK-205ENST00000506747 TSPAN4O14817 238 aa4.34□□□□□ -1.71
CLOCK-205ENST00000506747 MSI1O43347 362 aaKnown RBP4.34□□□□□ -1.71
CLOCK-205ENST00000506747 CEP104O60308 925 aa4.34□□□□□ -1.71
CLOCK-205ENST00000506747 PTP4A3O75365 173 aa4.34□□□□□ -1.71
CLOCK-205ENST00000506747 RNF8O76064 485 aa4.34□□□□□ -1.71
CLOCK-205ENST00000506747 CD63P08962 238 aa4.34□□□□□ -1.71
CLOCK-205ENST00000506747 KRTAP5-9P26371 169 aa4.34□□□□□ -1.71
CLOCK-205ENST00000506747 HOXD9P28356 352 aaPredicted RBP4.34□□□□□ -1.71
CLOCK-205ENST00000506747 TM4SF1P30408 202 aa4.34□□□□□ -1.71
CLOCK-205ENST00000506747 CHRNA5P30532 468 aa4.34□□□□□ -1.71
CLOCK-205ENST00000506747 ABCD1P33897 745 aa4.34□□□□□ -1.71
CLOCK-205ENST00000506747 TTKP33981 857 aa4.34□□□□□ -1.71
CLOCK-205ENST00000506747 PAFAH1B1P43034 410 aa4.34□□□□□ -1.71
CLOCK-205ENST00000506747 POLD2P49005 469 aa4.34□□□□□ -1.71
CLOCK-205ENST00000506747 STIM1Q13586 685 aa4.34□□□□□ -1.71
CLOCK-205ENST00000506747 KRT32Q14532 448 aa4.34□□□□□ -1.71
CLOCK-205ENST00000506747 ZNF268Q14587 947 aaPredicted RBP4.34□□□□□ -1.71
CLOCK-205ENST00000506747 MORN5Q5VZ52 161 aa4.34□□□□□ -1.71
CLOCK-205ENST00000506747 HAUS3Q68CZ6 603 aa4.34□□□□□ -1.71
CLOCK-205ENST00000506747 TXNDC8Q6A555 127 aa4.34□□□□□ -1.71
CLOCK-205ENST00000506747 ISM2Q6H9L7 571 aa4.34□□□□□ -1.71
CLOCK-205ENST00000506747 AAGABQ6PD74 315 aa4.34□□□□□ -1.71
CLOCK-205ENST00000506747 LRIG3Q6UXM1 1119 aa4.34□□□□□ -1.71
CLOCK-205ENST00000506747 BRINP3Q76B58 766 aa4.34□□□□□ -1.71
CLOCK-205ENST00000506747 PXKQ7Z7A4 578 aa4.34□□□□□ -1.71
CLOCK-205ENST00000506747 DDIASQ8IXT1 998 aa4.34□□□□□ -1.71
CLOCK-205ENST00000506747 NGEFQ8N5V2 710 aa4.34□□□□□ -1.71
CLOCK-205ENST00000506747 KCNG4Q8TDN1 519 aa4.34□□□□□ -1.71
CLOCK-205ENST00000506747 RPL36ALQ969Q0 106 aaKnown RBP4.34□□□□□ -1.71
CLOCK-205ENST00000506747 EME1Q96AY2 570 aa4.34□□□□□ -1.71
CLOCK-205ENST00000506747 COQ8BQ96D53 544 aa4.34□□□□□ -1.71
CLOCK-205ENST00000506747 WDR83Q9BRX9 315 aaKnown RBP4.34□□□□□ -1.71
CLOCK-205ENST00000506747 HEMGNQ9BXL5 484 aa4.34□□□□□ -1.71
CLOCK-205ENST00000506747 QTRT1Q9BXR0 403 aaKnown RBP4.34□□□□□ -1.71
CLOCK-205ENST00000506747 ITPAQ9BY32 194 aa4.34□□□□□ -1.71
CLOCK-205ENST00000506747 PCDHB16Q9NRJ7 776 aa4.34□□□□□ -1.71
CLOCK-205ENST00000506747 IRAK4Q9NWZ3 460 aa4.34□□□□□ -1.71
CLOCK-205ENST00000506747 UTS2RQ9UKP6 389 aa4.34□□□□□ -1.71
CLOCK-205ENST00000506747 CAMK2AQ9UQM7 478 aa4.34□□□□□ -1.71
CLOCK-205ENST00000506747 SCINQ9Y6U3 715 aa4.34□□□□□ -1.71
CLOCK-205ENST00000506747 DOK2O60496 412 aa4.33□□□□□ -1.72
CLOCK-205ENST00000506747 RNASEH2AO75792 299 aaKnown RBP4.33□□□□□ -1.72
CLOCK-205ENST00000506747 NFATC1O95644 943 aa4.33□□□□□ -1.72
CLOCK-205ENST00000506747 UNGP13051 313 aaPredicted RBP4.33□□□□□ -1.72
CLOCK-205ENST00000506747 CHMP24386 653 aa4.33□□□□□ -1.72
CLOCK-205ENST00000506747 PTGER1P34995 402 aa4.33□□□□□ -1.72
CLOCK-205ENST00000506747 CPOXP36551 454 aa4.33□□□□□ -1.72
CLOCK-205ENST00000506747 ARL1P40616 181 aaPredicted RBP4.33□□□□□ -1.72
CLOCK-205ENST00000506747 CXCR3P49682 368 aa4.33□□□□□ -1.72
CLOCK-205ENST00000506747 CYP2J2P51589 502 aa4.33□□□□□ -1.72
CLOCK-205ENST00000506747 ARSFP54793 590 aa4.33□□□□□ -1.72
CLOCK-205ENST00000506747 RPS13P62277 151 aaKnown RBP4.33□□□□□ -1.72
CLOCK-205ENST00000506747 GALNT3Q14435 633 aa4.33□□□□□ -1.72
CLOCK-205ENST00000506747 SLC9C1Q4G0N8 1177 aa4.33□□□□□ -1.72
CLOCK-205ENST00000506747 TTC39AQ5SRH9 613 aa4.33□□□□□ -1.72
CLOCK-205ENST00000506747 SPATA1Q5VX52 437 aa4.33□□□□□ -1.72
CLOCK-205ENST00000506747 SLC18B1Q6NT16 456 aa4.33□□□□□ -1.72
CLOCK-205ENST00000506747 C16orf54Q6UWD8 224 aa4.33□□□□□ -1.72
CLOCK-205ENST00000506747 IL20RBQ6UXL0 311 aa4.33□□□□□ -1.72
CLOCK-205ENST00000506747 FAM83HQ6ZRV2 1179 aaPredicted RBP4.33□□□□□ -1.72
CLOCK-205ENST00000506747 ADSSL1Q8N142 457 aa4.33□□□□□ -1.72
CLOCK-205ENST00000506747 NME8Q8N427 588 aa4.33□□□□□ -1.72
CLOCK-205ENST00000506747 C11orf65Q8NCR3 313 aa4.33□□□□□ -1.72
CLOCK-205ENST00000506747 DENND1AQ8TEH3 1009 aa4.33□□□□□ -1.72
CLOCK-205ENST00000506747 SNAPC3Q92966 411 aa4.33□□□□□ -1.72
CLOCK-205ENST00000506747 FAM118BQ9BPY3 351 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms