RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 FAM110DQ8TAY7 271 aaPredicted RBP3.45□□□□□ -1.86
TRAPPC11-205ENST00000506426 SCFD2Q8WU76 684 aa3.45□□□□□ -1.86
TRAPPC11-205ENST00000506426 POMGNT1Q8WZA1 660 aa3.45□□□□□ -1.86
TRAPPC11-205ENST00000506426 LINC00476Q8WZB0 136 aa3.45□□□□□ -1.86
TRAPPC11-205ENST00000506426 SLC9A6Q92581 669 aa3.45□□□□□ -1.86
TRAPPC11-205ENST00000506426 SMARCE1Q969G3 411 aa3.45□□□□□ -1.86
TRAPPC11-205ENST00000506426 CALML4Q96GE6 196 aa3.45□□□□□ -1.86
TRAPPC11-205ENST00000506426 KLHL15Q96M94 604 aa3.45□□□□□ -1.86
TRAPPC11-205ENST00000506426 PIP5K1AQ99755 562 aa3.45□□□□□ -1.86
TRAPPC11-205ENST00000506426 LBHD1Q9BQE6 289 aaPredicted RBP3.45□□□□□ -1.86
TRAPPC11-205ENST00000506426 NUAK2Q9H093 628 aa3.45□□□□□ -1.86
TRAPPC11-205ENST00000506426 PLSCR4Q9NRQ2 329 aa3.45□□□□□ -1.86
TRAPPC11-205ENST00000506426 TMEM248Q9NWD8 314 aa3.45□□□□□ -1.86
TRAPPC11-205ENST00000506426 ARL15Q9NXU5 204 aa3.45□□□□□ -1.86
TRAPPC11-205ENST00000506426 ASIC5Q9NY37 505 aa3.45□□□□□ -1.86
TRAPPC11-205ENST00000506426 EHD2Q9NZN4 543 aa3.45□□□□□ -1.86
TRAPPC11-205ENST00000506426 PEMTQ9UBM1 199 aa3.45□□□□□ -1.86
TRAPPC11-205ENST00000506426 CORO1CQ9ULV4 474 aaPredicted RBP3.45□□□□□ -1.86
TRAPPC11-205ENST00000506426 MAFFQ9ULX9 164 aa3.45□□□□□ -1.86
TRAPPC11-205ENST00000506426 DHDHQ9UQ10 334 aa3.45□□□□□ -1.86
TRAPPC11-205ENST00000506426 TMEM5Q9Y2B1 443 aa3.45□□□□□ -1.86
TRAPPC11-205ENST00000506426 KCNE2Q9Y6J6 123 aa3.45□□□□□ -1.86
TRAPPC11-205ENST00000506426 SCAF11Q99590 1463 aaKnown RBP3.45□□□□□ -1.86
TRAPPC11-205ENST00000506426 IQGAP1P46940 1657 aa3.45□□□□□ -1.86
TRAPPC11-205ENST00000506426 ABCC5O15440 1437 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 PRDM15P57071 1507 aaPredicted RBP3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 CEP152O94986 1710 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 STRCP1A6NGW2 1772 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 SYNMO15061 1565 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 MAST1Q9Y2H9 1570 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 MED14O60244 1454 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 OR6C68A6NDL8 312 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 TTC36A6NLP5 189 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 MYO1GB0I1T2 1018 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 CEP104O60308 925 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 EIF2S1P05198 315 aaKnown RBP3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 TSPY4P0CV99 314 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 TSPY10P0CW01 314 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 CSH1P0DML2 217 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 CSH2P0DML3 217 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 ZNF20P17024 532 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 TYK2P29597 1187 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 FMO4P31512 558 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 ICAM3P32942 547 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 ADRA1BP35368 520 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 PPARGP37231 505 aaPredicted RBP3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 PSMB10P40306 273 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 NLRP5P59047 1200 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 DGCR2P98153 550 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 GOLGA8DPQ0D2H9 430 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 TMEM115Q12893 351 aaPredicted RBP3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 FOXE3Q13461 319 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 SEMA3AQ14563 771 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 CRYMQ14894 314 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 CDSNQ15517 529 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 GSTA3Q16772 222 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 DUSP28Q4G0W2 176 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 ZNF667Q5HYK9 610 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 CC2D1BQ5T0F9 858 aaKnown RBP3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 CEP85Q6P2H3 762 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 CYP20A1Q6UW02 462 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 DHRS13Q6UX07 377 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 IL20RBQ6UXL0 311 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 SERPINA13PQ6UXR4 307 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 RANBP10Q6VN20 620 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 TRIM72Q6ZMU5 477 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 MDGA2Q7Z553 956 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 TADA2BQ86TJ2 420 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 RASAL3Q86YV0 1011 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 UEVLDQ8IX04 471 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 ULK2Q8IYT8 1036 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 TAGAPQ8N103 731 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 PLD5Q8N7P1 536 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 EXD3Q8N9H8 876 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 DNAAF1Q8NEP3 725 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 ARHGEF2Q92974 986 aaKnown RBP3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 FAM120BQ96EK7 910 aaKnown RBP3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 ZNF503Q96F45 646 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 ZNF764Q96H86 408 aaPredicted RBP3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 FEM1CQ96JP0 617 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 ADAD1Q96M93 576 aaKnown RBP3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 C1QTNF3Q9BXJ4 246 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 FTOQ9C0B1 505 aaKnown RBP eCLIP3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 SMARCAD1Q9H4L7 1026 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 SLC32A1Q9H598 525 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 ERVK-5Q9HDB9 667 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 RRP7BPQ9NSQ0 103 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 ARL8BQ9NVJ2 186 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 BABAM1Q9NWV8 329 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 SYBUQ9NX95 663 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 HDAC6Q9UBN7 1215 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 UPB1Q9UBR1 384 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 ZNF70Q9UC06 446 aaPredicted RBP3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 SNX8Q9Y5X2 465 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 DEPDC5O75140 1603 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 MAP3K1Q13233 1512 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 DAPK1P53355 1430 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 EMSYQ7Z589 1322 aa3.44□□□□□ -1.86
TRAPPC11-205ENST00000506426 COL4A3Q01955 1670 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms