RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 RAD51BO15315 384 aa8.42□□□□□ -1.06
SNF8-204ENST00000506104 AQP9O43315 295 aa8.42□□□□□ -1.06
SNF8-204ENST00000506104 DAB1O75553 588 aa8.42□□□□□ -1.06
SNF8-204ENST00000506104 TNFSF15O95150 251 aa8.42□□□□□ -1.06
SNF8-204ENST00000506104 IGLV3-25P01717 112 aa8.42□□□□□ -1.06
SNF8-204ENST00000506104 ERBB2P04626 1255 aa8.42□□□□□ -1.06
SNF8-204ENST00000506104 ANXA6P08133 673 aa8.42□□□□□ -1.06
SNF8-204ENST00000506104 SLC9A1P19634 815 aa8.42□□□□□ -1.06
SNF8-204ENST00000506104 GKP32189 559 aa8.42□□□□□ -1.06
SNF8-204ENST00000506104 PPP1R2P41236 205 aa8.42□□□□□ -1.06
SNF8-204ENST00000506104 ADKP55263 362 aaKnown RBP8.42□□□□□ -1.06
SNF8-204ENST00000506104 RPS21P63220 83 aaKnown RBP8.42□□□□□ -1.06
SNF8-204ENST00000506104 SLC6A3Q01959 620 aa8.42□□□□□ -1.06
SNF8-204ENST00000506104 KCNC4Q03721 635 aa8.42□□□□□ -1.06
SNF8-204ENST00000506104 PTK2Q05397 1052 aa8.42□□□□□ -1.06
SNF8-204ENST00000506104 NFATC3Q12968 1075 aa8.42□□□□□ -1.06
SNF8-204ENST00000506104 PAK1Q13153 545 aa8.42□□□□□ -1.06
SNF8-204ENST00000506104 SPIDRQ14159 915 aa8.42□□□□□ -1.06
SNF8-204ENST00000506104 FZD2Q14332 565 aa8.42□□□□□ -1.06
SNF8-204ENST00000506104 PRRT3Q5FWE3 981 aa8.42□□□□□ -1.06
SNF8-204ENST00000506104 LRRC73Q5JTD7 316 aa8.42□□□□□ -1.06
SNF8-204ENST00000506104 CDCP2Q5VXM1 449 aa8.42□□□□□ -1.06
SNF8-204ENST00000506104 RETSATQ6NUM9 610 aa8.42□□□□□ -1.06
SNF8-204ENST00000506104 ZCCHC8Q6NZY4 707 aaKnown RBP8.42□□□□□ -1.06
SNF8-204ENST00000506104 NEK5Q6P3R8 708 aa8.42□□□□□ -1.06
SNF8-204ENST00000506104 PCSK4Q6UW60 755 aa8.42□□□□□ -1.06
SNF8-204ENST00000506104 RBM44Q6ZP01 1051 aaKnown RBP8.42□□□□□ -1.06
SNF8-204ENST00000506104 BEND5Q7L4P6 421 aa8.42□□□□□ -1.06
SNF8-204ENST00000506104 RD3Q7Z3Z2 195 aa8.42□□□□□ -1.06
SNF8-204ENST00000506104 TMEM110Q86TL2 294 aa8.42□□□□□ -1.06
SNF8-204ENST00000506104 VPS36Q86VN1 386 aa8.42□□□□□ -1.06
SNF8-204ENST00000506104 PARGQ86W56 976 aa8.42□□□□□ -1.06
SNF8-204ENST00000506104 RBFAQ8N0V3 343 aa8.42□□□□□ -1.06
SNF8-204ENST00000506104 SLC22A18ASQ8N1D0 253 aa8.42□□□□□ -1.06
SNF8-204ENST00000506104 ARL14Q8N4G2 192 aa8.42□□□□□ -1.06
SNF8-204ENST00000506104 PAF1Q8N7H5 531 aa8.42□□□□□ -1.06
SNF8-204ENST00000506104 TMEM145Q8NBT3 493 aa8.42□□□□□ -1.06
SNF8-204ENST00000506104 TMIEQ8NEW7 156 aa8.42□□□□□ -1.06
SNF8-204ENST00000506104 OR2A12Q8NGT7 310 aa8.42□□□□□ -1.06
SNF8-204ENST00000506104 STK32AQ8WU08 396 aa8.42□□□□□ -1.06
SNF8-204ENST00000506104 GLMNQ92990 594 aa8.42□□□□□ -1.06
SNF8-204ENST00000506104 ALG14Q96F25 216 aa8.42□□□□□ -1.06
SNF8-204ENST00000506104 SLC2A13Q96QE2 648 aa8.42□□□□□ -1.06
SNF8-204ENST00000506104 PSMB7Q99436 277 aa8.42□□□□□ -1.06
SNF8-204ENST00000506104 HEPHQ9BQS7 1158 aa8.42□□□□□ -1.06
SNF8-204ENST00000506104 CLMPQ9H6B4 373 aa8.42□□□□□ -1.06
SNF8-204ENST00000506104 PIGVQ9NUD9 493 aa8.42□□□□□ -1.06
SNF8-204ENST00000506104 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.42□□□□□ -1.06
SNF8-204ENST00000506104 STAP1Q9ULZ2 295 aa8.42□□□□□ -1.06
SNF8-204ENST00000506104 ITM2BQ9Y287 266 aa8.42□□□□□ -1.06
SNF8-204ENST00000506104 ACTL7AQ9Y615 435 aa8.42□□□□□ -1.06
SNF8-204ENST00000506104 ANKRD36A6QL64 1941 aa8.41□□□□□ -1.06
SNF8-204ENST00000506104 FGFR1OPO95684 399 aaKnown RBP8.41□□□□□ -1.06
SNF8-204ENST00000506104 GNA14O95837 355 aa8.41□□□□□ -1.06
SNF8-204ENST00000506104 GP1BAP07359 652 aa8.41□□□□□ -1.06
SNF8-204ENST00000506104 PNMA6AP0CW24 399 aaPredicted RBP8.41□□□□□ -1.06
SNF8-204ENST00000506104 C6P13671 934 aa8.41□□□□□ -1.06
SNF8-204ENST00000506104 ADRB3P13945 408 aa8.41□□□□□ -1.06
SNF8-204ENST00000506104 CTSEP14091 401 aa8.41□□□□□ -1.06
SNF8-204ENST00000506104 TFE3P19532 575 aaPredicted RBP8.41□□□□□ -1.06
SNF8-204ENST00000506104 XPAP23025 273 aaPredicted RBP8.41□□□□□ -1.06
SNF8-204ENST00000506104 L1CAMP32004 1257 aa8.41□□□□□ -1.06
SNF8-204ENST00000506104 NOS2P35228 1153 aa8.41□□□□□ -1.06
SNF8-204ENST00000506104 MTIF2P46199 727 aaKnown RBP8.41□□□□□ -1.06
SNF8-204ENST00000506104 RPIAP49247 311 aa8.41□□□□□ -1.06
SNF8-204ENST00000506104 CCNHP51946 323 aaPredicted RBP8.41□□□□□ -1.06
SNF8-204ENST00000506104 MCCD1P59942 119 aaPredicted RBP8.41□□□□□ -1.06
SNF8-204ENST00000506104 ERVPABLB-1P60509 514 aa8.41□□□□□ -1.06
SNF8-204ENST00000506104 TPD52L1Q16890 204 aaPredicted RBP8.41□□□□□ -1.06
SNF8-204ENST00000506104 COBLL1Q53SF7 1204 aa8.41□□□□□ -1.06
SNF8-204ENST00000506104 CARD16Q5EG05 197 aa8.41□□□□□ -1.06
SNF8-204ENST00000506104 PERM1Q5SV97 790 aa8.41□□□□□ -1.06
SNF8-204ENST00000506104 FAM102AQ5T9C2 384 aaPredicted RBP8.41□□□□□ -1.06
SNF8-204ENST00000506104 TAF3Q5VWG9 929 aa8.41□□□□□ -1.06
SNF8-204ENST00000506104 KIAA1161Q6NSJ0 714 aa8.41□□□□□ -1.06
SNF8-204ENST00000506104 RWDD4Q6NW29 188 aaKnown RBP8.41□□□□□ -1.06
SNF8-204ENST00000506104 TTI2Q6NXR4 508 aa8.41□□□□□ -1.06
SNF8-204ENST00000506104 GBP6Q6ZN66 633 aa8.41□□□□□ -1.06
SNF8-204ENST00000506104 USP53Q70EK8 1073 aa8.41□□□□□ -1.06
SNF8-204ENST00000506104 DCP2Q8IU60 420 aaKnown RBP8.41□□□□□ -1.06
SNF8-204ENST00000506104 CACTIN-AS1Q8N1I8 211 aa8.41□□□□□ -1.06
SNF8-204ENST00000506104 CCDC97Q96F63 343 aaPredicted RBP8.41□□□□□ -1.06
SNF8-204ENST00000506104 PRR11Q96HE9 360 aaPredicted RBP8.41□□□□□ -1.06
SNF8-204ENST00000506104 BMFQ96LC9 184 aa8.41□□□□□ -1.06
SNF8-204ENST00000506104 TBCBQ99426 244 aa8.41□□□□□ -1.06
SNF8-204ENST00000506104 DPH1Q9BZG8 443 aa8.41□□□□□ -1.06
SNF8-204ENST00000506104 SLC13A1Q9BZW2 595 aa8.41□□□□□ -1.06
SNF8-204ENST00000506104 TCEAL2Q9H3H9 227 aaPredicted RBP8.41□□□□□ -1.06
SNF8-204ENST00000506104 HECAQ9UBI9 543 aaPredicted RBP8.41□□□□□ -1.06
SNF8-204ENST00000506104 SPASTQ9UBP0 616 aa8.41□□□□□ -1.06
SNF8-204ENST00000506104 APOBEC3BQ9UH17 382 aaKnown RBP8.41□□□□□ -1.06
SNF8-204ENST00000506104 GGT7Q9UJ14 662 aa8.41□□□□□ -1.06
SNF8-204ENST00000506104 HS3ST2Q9Y278 367 aa8.41□□□□□ -1.06
SNF8-204ENST00000506104 ENTPD2Q9Y5L3 495 aa8.41□□□□□ -1.06
SNF8-204ENST00000506104 COL6A6A6NMZ7 2263 aa8.4□□□□□ -1.06
SNF8-204ENST00000506104 UNC13CQ8NB66 2214 aa8.4□□□□□ -1.06
SNF8-204ENST00000506104 BECN2A8MW95 431 aa8.4□□□□□ -1.06
SNF8-204ENST00000506104 PPP1R3GB7ZBB8 358 aa8.4□□□□□ -1.06
SNF8-204ENST00000506104 B8ZZF3 427 aa8.4□□□□□ -1.06
SNF8-204ENST00000506104 CASC3O15234 703 aaKnown RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms