RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, human

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX41-204	ENST00000504807	C22orf39	Q6P5X5	142 aa		13.43	□□□□□ -0.26
DDX41-204	ENST00000504807	LEKR1	Q6ZMV7	388 aa		13.43	□□□□□ -0.26
DDX41-204	ENST00000504807	DPY19L3	Q6ZPD9	716 aa		13.43	□□□□□ -0.26
DDX41-204	ENST00000504807	ARC	Q7LC44	396 aa		13.43	□□□□□ -0.26
DDX41-204	ENST00000504807	KANSL1	Q7Z3B3	1105 aa		13.43	□□□□□ -0.26
DDX41-204	ENST00000504807	SETD3	Q86TU7	594 aa	Predicted RBP	13.43	□□□□□ -0.26
DDX41-204	ENST00000504807	NLRP14	Q86W24	1093 aa		13.43	□□□□□ -0.26
DDX41-204	ENST00000504807	DRC7	Q8IY82	874 aa		13.43	□□□□□ -0.26
DDX41-204	ENST00000504807	TBC1D3	Q8IZP1	549 aa	Predicted RBP	13.43	□□□□□ -0.26
DDX41-204	ENST00000504807	PYROXD2	Q8N2H3	581 aa		13.43	□□□□□ -0.26
DDX41-204	ENST00000504807	ATP11C	Q8NB49	1132 aa		13.43	□□□□□ -0.26
DDX41-204	ENST00000504807	NETO2	Q8NC67	525 aa		13.43	□□□□□ -0.26
DDX41-204	ENST00000504807	KNL1	Q8NG31	2342 aa		13.43	□□□□□ -0.26
DDX41-204	ENST00000504807	NAF1	Q96HR8	494 aa	Known RBP	13.43	□□□□□ -0.26
DDX41-204	ENST00000504807	SERAC1	Q96JX3	654 aa		13.43	□□□□□ -0.26
DDX41-204	ENST00000504807	HAPLN3	Q96S86	360 aa		13.43	□□□□□ -0.26
DDX41-204	ENST00000504807	MYOC	Q99972	504 aa		13.43	□□□□□ -0.26
DDX41-204	ENST00000504807	SYT11	Q9BT88	431 aa		13.43	□□□□□ -0.26
DDX41-204	ENST00000504807	CPNE5	Q9HCH3	593 aa		13.43	□□□□□ -0.26
DDX41-204	ENST00000504807	FZD3	Q9NPG1	666 aa		13.43	□□□□□ -0.26
DDX41-204	ENST00000504807	AASDHPPT	Q9NRN7	309 aa		13.43	□□□□□ -0.26
DDX41-204	ENST00000504807	TAS2R14	Q9NYV8	317 aa		13.43	□□□□□ -0.26
DDX41-204	ENST00000504807	ZFR2	Q9UPR6	939 aa	Known RBP	13.43	□□□□□ -0.26
DDX41-204	ENST00000504807	FCF1	Q9Y324	198 aa	Known RBP	13.43	□□□□□ -0.26
DDX41-204	ENST00000504807	WASF2	Q9Y6W5	498 aa		13.43	□□□□□ -0.26
DDX41-204	ENST00000504807	LRRC10B	A6NIK2	292 aa		13.42	□□□□□ -0.26
DDX41-204	ENST00000504807	TEX33	O43247	280 aa		13.42	□□□□□ -0.26
DDX41-204	ENST00000504807	F9	P00740	461 aa		13.42	□□□□□ -0.26
DDX41-204	ENST00000504807	PRLR	P16471	622 aa		13.42	□□□□□ -0.26
DDX41-204	ENST00000504807	CD38	P28907	300 aa		13.42	□□□□□ -0.26
DDX41-204	ENST00000504807	OR1E1	P30953	314 aa		13.42	□□□□□ -0.26
DDX41-204	ENST00000504807	CHRNA3	P32297	505 aa		13.42	□□□□□ -0.26
DDX41-204	ENST00000504807	ADRA1B	P35368	520 aa		13.42	□□□□□ -0.26
DDX41-204	ENST00000504807	CCT8	P50990	548 aa		13.42	□□□□□ -0.26
DDX41-204	ENST00000504807	OXCT1	P55809	520 aa		13.42	□□□□□ -0.26
DDX41-204	ENST00000504807	SNX16	P57768	344 aa		13.42	□□□□□ -0.26
DDX41-204	ENST00000504807	MYL5	Q02045	173 aa		13.42	□□□□□ -0.26
DDX41-204	ENST00000504807	OGDH	Q02218	1023 aa		13.42	□□□□□ -0.26
DDX41-204	ENST00000504807	TARDBP	Q13148	414 aa	Known RBP eCLIP	13.42	□□□□□ -0.26
DDX41-204	ENST00000504807	FGL2	Q14314	439 aa		13.42	□□□□□ -0.26
DDX41-204	ENST00000504807	E4F1	Q66K89	784 aa	Predicted RBP	13.42	□□□□□ -0.26
DDX41-204	ENST00000504807	MON1B	Q7L1V2	547 aa		13.42	□□□□□ -0.26
DDX41-204	ENST00000504807	ADAT2	Q7Z6V5	191 aa	Known RBP	13.42	□□□□□ -0.26
DDX41-204	ENST00000504807	ZNF677	Q86XU0	584 aa		13.42	□□□□□ -0.26
DDX41-204	ENST00000504807	AOPEP	Q8N6M6	819 aa		13.42	□□□□□ -0.26
DDX41-204	ENST00000504807	GRIN3A	Q8TCU5	1115 aa		13.42	□□□□□ -0.26
DDX41-204	ENST00000504807	SAP25	Q8TEE9	199 aa		13.42	□□□□□ -0.26
DDX41-204	ENST00000504807	CENPI	Q92674	756 aa	Predicted RBP	13.42	□□□□□ -0.26
DDX41-204	ENST00000504807	ELF4	Q99607	663 aa	Predicted RBP	13.42	□□□□□ -0.26
DDX41-204	ENST00000504807	ACE2	Q9BYF1	805 aa	Predicted RBP	13.42	□□□□□ -0.26
DDX41-204	ENST00000504807	ZYG11B	Q9C0D3	744 aa		13.42	□□□□□ -0.26
DDX41-204	ENST00000504807	KLC2	Q9H0B6	622 aa		13.42	□□□□□ -0.26
DDX41-204	ENST00000504807	NOL6	Q9H6R4	1146 aa	Known RBP	13.42	□□□□□ -0.26
DDX41-204	ENST00000504807	FLNC	Q14315	2725 aa		13.42	□□□□□ -0.26
DDX41-204	ENST00000504807	DOPEY2	Q9Y3R5	2298 aa		13.41	□□□□□ -0.26
DDX41-204	ENST00000504807	ALOX15B	O15296	676 aa		13.41	□□□□□ -0.26
DDX41-204	ENST00000504807	SPINT1	O43278	529 aa		13.41	□□□□□ -0.26
DDX41-204	ENST00000504807	BRINP1	O60477	761 aa		13.41	□□□□□ -0.26
DDX41-204	ENST00000504807	NNMT	P40261	264 aa		13.41	□□□□□ -0.26
DDX41-204	ENST00000504807	STAT1	P42224	750 aa		13.41	□□□□□ -0.26
DDX41-204	ENST00000504807	GRK6	P43250	576 aa		13.41	□□□□□ -0.26
DDX41-204	ENST00000504807	SERPINH1	P50454	418 aa	Known RBP	13.41	□□□□□ -0.26
DDX41-204	ENST00000504807	RPL7A	P62424	266 aa	Known RBP	13.41	□□□□□ -0.26
DDX41-204	ENST00000504807	GNA12	Q03113	381 aa		13.41	□□□□□ -0.26
DDX41-204	ENST00000504807	DNAJC3	Q13217	504 aa		13.41	□□□□□ -0.26
DDX41-204	ENST00000504807	STX1A	Q16623	288 aa		13.41	□□□□□ -0.26
DDX41-204	ENST00000504807	ZNF284	Q2VY69	593 aa		13.41	□□□□□ -0.26
DDX41-204	ENST00000504807	ARSI	Q5FYB1	569 aa		13.41	□□□□□ -0.26
DDX41-204	ENST00000504807	PPP1R15B	Q5SWA1	713 aa		13.41	□□□□□ -0.26
DDX41-204	ENST00000504807	SEL1L3	Q68CR1	1132 aa		13.41	□□□□□ -0.26
DDX41-204	ENST00000504807	NAPEPLD	Q6IQ20	393 aa		13.41	□□□□□ -0.26
DDX41-204	ENST00000504807	WDR59	Q6PJI9	974 aa		13.41	□□□□□ -0.26
DDX41-204	ENST00000504807	TRIM69	Q86WT6	500 aa		13.41	□□□□□ -0.26
DDX41-204	ENST00000504807	TMEM145	Q8NBT3	493 aa		13.41	□□□□□ -0.26
DDX41-204	ENST00000504807	FAM172A	Q8WUF8	416 aa		13.41	□□□□□ -0.26
DDX41-204	ENST00000504807	ERGIC2	Q96RQ1	377 aa		13.41	□□□□□ -0.26
DDX41-204	ENST00000504807	LGMN	Q99538	433 aa		13.41	□□□□□ -0.26
DDX41-204	ENST00000504807	SPON2	Q9BUD6	331 aa		13.41	□□□□□ -0.26
DDX41-204	ENST00000504807	C2orf49	Q9BVC5	232 aa	Predicted RBP	13.41	□□□□□ -0.26
DDX41-204	ENST00000504807	FTSJ1	Q9UET6	329 aa		13.41	□□□□□ -0.26
DDX41-204	ENST00000504807	GGT7	Q9UJ14	662 aa		13.41	□□□□□ -0.26
DDX41-204	ENST00000504807	CHD5	Q8TDI0	1954 aa		13.4	□□□□□ -0.26
DDX41-204	ENST00000504807		A0A1W2PQU0	124 aa		13.4	□□□□□ -0.26
DDX41-204	ENST00000504807	ILVBL	A1L0T0	632 aa		13.4	□□□□□ -0.26
DDX41-204	ENST00000504807	TLR4	O00206	839 aa		13.4	□□□□□ -0.26
DDX41-204	ENST00000504807	KPNA3	O00505	521 aa	Predicted RBP	13.4	□□□□□ -0.26
DDX41-204	ENST00000504807	RAD51B	O15315	384 aa		13.4	□□□□□ -0.26
DDX41-204	ENST00000504807	SLC7A4	O43246	635 aa		13.4	□□□□□ -0.26
DDX41-204	ENST00000504807	CCP110	O43303	1012 aa		13.4	□□□□□ -0.26
DDX41-204	ENST00000504807	RNGTT	O60942	597 aa	Known RBP	13.4	□□□□□ -0.26
DDX41-204	ENST00000504807	LEFTY1	O75610	366 aa		13.4	□□□□□ -0.26
DDX41-204	ENST00000504807	LRIG2	O94898	1065 aa		13.4	□□□□□ -0.26
DDX41-204	ENST00000504807	EPHA8	P29322	1005 aa	Predicted RBP	13.4	□□□□□ -0.26
DDX41-204	ENST00000504807	PTPN9	P43378	593 aa		13.4	□□□□□ -0.26
DDX41-204	ENST00000504807	GSC	P56915	257 aa	Predicted RBP	13.4	□□□□□ -0.26
DDX41-204	ENST00000504807	C21orf59	P57076	290 aa		13.4	□□□□□ -0.26
DDX41-204	ENST00000504807	KRT83	P78385	493 aa		13.4	□□□□□ -0.26
DDX41-204	ENST00000504807	UBXN1	Q04323	297 aa		13.4	□□□□□ -0.26
DDX41-204	ENST00000504807	TYRO3	Q06418	890 aa		13.4	□□□□□ -0.26
DDX41-204	ENST00000504807	MTA1	Q13330	715 aa		13.4	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms