RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 USP29Q9HBJ7 922 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 SPATA6Q9NWH7 488 aaPredicted RBP5.36□□□□□ -1.55
NIPBL-204ENST00000504430 RCOR1Q9UKL0 485 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 A0A0A6YYJ9 748 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 E9PBE3 544 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 SMAD6O43541 496 aaKnown RBP5.36□□□□□ -1.55
NIPBL-204ENST00000504430 ITGA10O75578 1167 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 RECQL5O94762 991 aaPredicted RBP5.36□□□□□ -1.55
NIPBL-204ENST00000504430 LIPFP07098 398 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 TROVE2P10155 538 aaKnown RBP eCLIP5.36□□□□□ -1.55
NIPBL-204ENST00000504430 EPXP11678 715 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 GLB1P16278 677 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 KCNMA1Q12791 1236 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 RPS6KA1Q15418 735 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 CCDC178Q5BJE1 867 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 TBC1D9BQ66K14 1250 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 DGAT2L7PQ6IED9 249 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 KRT80Q6KB66 452 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 BBS5Q8N3I7 341 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 L3MBTL4Q8NA19 623 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 TMEM171Q8WVE6 324 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 CCDC51Q96ER9 411 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 DYDC2Q96IM9 177 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 HHIPL1Q96JK4 782 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 RPRD1AQ96P16 312 aaPredicted RBP5.36□□□□□ -1.55
NIPBL-204ENST00000504430 TBC1D10AQ9BXI6 508 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 TRIM31Q9BZY9 425 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 GIMAP4Q9NUV9 329 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 ING3Q9NXR8 418 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.36□□□□□ -1.551e-9■■■□□ 15.8
NIPBL-204ENST00000504430 XPR1Q9UBH6 696 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 FBXL17Q9UF56 701 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 MRPL11Q9Y3B7 192 aaKnown RBP5.36□□□□□ -1.55
NIPBL-204ENST00000504430 NEU2Q9Y3R4 380 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 LIPGQ9Y5X9 500 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 ZMYM3Q14202 1370 aa5.36□□□□□ -1.55
NIPBL-204ENST00000504430 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.35□□□□□ -1.55
NIPBL-204ENST00000504430 FAM47DPA6NHR8 397 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 L7N2F9 121 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 GNAI2P04899 355 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 RAP2AP10114 183 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 PFKLP17858 780 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 HNRNPA2B1P22626 353 aaKnown RBP5.35□□□□□ -1.55
NIPBL-204ENST00000504430 CHMLP26374 656 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 MFAP3P55082 362 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 EGR3Q06889 387 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 GPM6BQ13491 265 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 ZNF273Q14593 569 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 NKPD1Q17RQ9 610 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 PAPD4Q6PIY7 484 aaKnown RBP5.35□□□□□ -1.55
NIPBL-204ENST00000504430 MTSS1LQ765P7 747 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 KLHL7Q8IXQ5 586 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 DDIASQ8IXT1 998 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 ATAD1Q8NBU5 361 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.35□□□□□ -1.55
NIPBL-204ENST00000504430 PTERQ96BW5 349 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 EFHD2Q96C19 240 aaPredicted RBP5.35□□□□□ -1.55
NIPBL-204ENST00000504430 INTS12Q96CB8 462 aaKnown RBP5.35□□□□□ -1.55
NIPBL-204ENST00000504430 SCARF2Q96GP6 870 aaPredicted RBP5.35□□□□□ -1.55
NIPBL-204ENST00000504430 CCDC77Q9BR77 488 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 TACO1Q9BSH4 297 aaKnown RBP5.35□□□□□ -1.55
NIPBL-204ENST00000504430 MMTAG2Q9BU76 263 aaKnown RBP5.35□□□□□ -1.55
NIPBL-204ENST00000504430 EIF2AQ9BY44 585 aaKnown RBP5.35□□□□□ -1.55
NIPBL-204ENST00000504430 NFKBIZQ9BYH8 718 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 EPB41L4BQ9H329 900 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 UNKLQ9H9P5 680 aaKnown RBP5.35□□□□□ -1.55
NIPBL-204ENST00000504430 PTGFRNQ9P2B2 879 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 CDC14AQ9UNH5 594 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 MROH5Q6ZUA9 1318 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 H0YIV9 168 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 GAS2O43903 313 aaKnown RBP5.35□□□□□ -1.55
NIPBL-204ENST00000504430 PTPN6P29350 595 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 GUCY1A2P33402 732 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 GLRBP48167 497 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 BMXP51813 675 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 CAPZA1P52907 286 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 NTRK2Q16620 822 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 GAB4Q2WGN9 574 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 SPDYAQ5MJ70 313 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 EMC10Q5UCC4 262 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 OR6B2Q6IFH4 312 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 MRNIPQ6NTE8 343 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 CYP2R1Q6VVX0 501 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.35□□□□□ -1.55
NIPBL-204ENST00000504430 VASH2Q86V25 355 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 HACE1Q8IYU2 909 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 CAMKVQ8NCB2 501 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 TMIEQ8NEW7 156 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 OR5AN1Q8NGI8 311 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 RNFT2Q96EX2 444 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 C16orf58Q96GQ5 468 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 KLHL15Q96M94 604 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 RAB3IPQ96QF0 476 aaPredicted RBP5.35□□□□□ -1.55
NIPBL-204ENST00000504430 SH3GL1Q99961 368 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 EGLN1Q9GZT9 426 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 NYXQ9GZU5 481 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 STMN4Q9H169 189 aaPredicted RBP5.35□□□□□ -1.55
NIPBL-204ENST00000504430 CCDC134Q9H6E4 229 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 TMEM140Q9NV12 185 aa5.35□□□□□ -1.55
NIPBL-204ENST00000504430 ACEP12821 1306 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms