RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 MRGPRX3Q96LB0 322 aa3.75□□□□□ -1.81
USP46-205ENST00000504078 CEP295NLQ96MC4 621 aa3.75□□□□□ -1.81
USP46-205ENST00000504078 CCNL2Q96S94 520 aaPredicted RBP3.75□□□□□ -1.81
USP46-205ENST00000504078 LLPHQ9BRT6 129 aaKnown RBP3.75□□□□□ -1.81
USP46-205ENST00000504078 FUCA2Q9BTY2 467 aa3.75□□□□□ -1.81
USP46-205ENST00000504078 ABCG4Q9H172 646 aa3.75□□□□□ -1.81
USP46-205ENST00000504078 TCEAL2Q9H3H9 227 aaPredicted RBP3.75□□□□□ -1.81
USP46-205ENST00000504078 APOBEC3GQ9HC16 384 aaKnown RBP3.75□□□□□ -1.81
USP46-205ENST00000504078 CSNK1G1Q9HCP0 422 aa3.75□□□□□ -1.81
USP46-205ENST00000504078 ZNF71Q9NQZ8 489 aaPredicted RBP3.75□□□□□ -1.81
USP46-205ENST00000504078 OLFML3Q9NRN5 406 aa3.75□□□□□ -1.81
USP46-205ENST00000504078 STARD5Q9NSY2 213 aa3.75□□□□□ -1.81
USP46-205ENST00000504078 IL37Q9NZH6 218 aa3.75□□□□□ -1.81
USP46-205ENST00000504078 FOXJ2Q9P0K8 574 aa3.75□□□□□ -1.81
USP46-205ENST00000504078 SIRPGQ9P1W8 387 aa3.75□□□□□ -1.81
USP46-205ENST00000504078 PISDQ9UG56 409 aa3.75□□□□□ -1.81
USP46-205ENST00000504078 CYTH4Q9UIA0 394 aa3.75□□□□□ -1.81
USP46-205ENST00000504078 XPO7Q9UIA9 1087 aaKnown RBP3.75□□□□□ -1.81
USP46-205ENST00000504078 KCNG1Q9UIX4 513 aa3.75□□□□□ -1.81
USP46-205ENST00000504078 FBXO2Q9UK22 296 aaPredicted RBP3.75□□□□□ -1.81
USP46-205ENST00000504078 SARDHQ9UL12 918 aa3.75□□□□□ -1.81
USP46-205ENST00000504078 STRIP2Q9ULQ0 834 aa3.75□□□□□ -1.81
USP46-205ENST00000504078 PLA2G4CQ9UP65 541 aa3.75□□□□□ -1.81
USP46-205ENST00000504078 KIF3AQ9Y496 699 aa3.75□□□□□ -1.81
USP46-205ENST00000504078 DAAM1Q9Y4D1 1078 aa3.75□□□□□ -1.81
USP46-205ENST00000504078 PCDHA5Q9Y5H7 936 aa3.75□□□□□ -1.81
USP46-205ENST00000504078 RELNP78509 3460 aa3.75□□□□□ -1.81
USP46-205ENST00000504078 PTPN13Q12923 2485 aa3.75□□□□□ -1.81
USP46-205ENST00000504078 KIF26BQ2KJY2 2108 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 ITIH6Q6UXX5 1313 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 TDRD6O60522 2096 aaKnown RBP3.74□□□□□ -1.81
USP46-205ENST00000504078 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.74□□□□□ -1.81
USP46-205ENST00000504078 PRAMEF33A0A0G2JMD5 474 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 A0A1W2PQU0 124 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 FRMD3A2A2Y4 597 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 CDRT15L2A8MXV6 281 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 K7ESM1 405 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 NPC1O15118 1278 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 DFNA5O60443 496 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 EXOC3O60645 756 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 PRAMEF10O60809 474 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 RNASEH1O60930 286 aaKnown RBP3.74□□□□□ -1.81
USP46-205ENST00000504078 RNGTTO60942 597 aaKnown RBP3.74□□□□□ -1.81
USP46-205ENST00000504078 PPFIA2O75334 1257 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 HLA-DRAP01903 254 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 AFPP02771 609 aaKnown RBP3.74□□□□□ -1.81
USP46-205ENST00000504078 ATP5BP06576 529 aaKnown RBP3.74□□□□□ -1.81
USP46-205ENST00000504078 PRKAR1AP10644 381 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 ALPPL2P10696 532 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 CKMT1AP12532 417 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 LCP1P13796 627 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 PDGFRAP16234 1089 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 SLC5A2P31639 672 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 ABCD1P33897 745 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 CHKAP35790 457 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 LONP1P36776 959 aaKnown RBP3.74□□□□□ -1.81
USP46-205ENST00000504078 ETV5P41161 510 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 AFMP43652 599 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 RXRGP48443 463 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 RGS7P49802 495 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 CCR5P51681 352 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 TKTL1P51854 596 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 ZNF132P52740 706 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 MAPK10P53779 464 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 POU5F1Q01860 360 aaKnown RBP3.74□□□□□ -1.81
USP46-205ENST00000504078 CNTN1Q12860 1018 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 ZNF177Q13360 481 aaPredicted RBP3.74□□□□□ -1.81
USP46-205ENST00000504078 ZNF211Q13398 564 aaPredicted RBP3.74□□□□□ -1.81
USP46-205ENST00000504078 C1orf61Q13536 156 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 PLCL1Q15111 1095 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 SURF1Q15526 300 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 TBR1Q16650 682 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 MPPE1Q53F39 396 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 FAM133BQ5BKY9 247 aaKnown RBP3.74□□□□□ -1.81
USP46-205ENST00000504078 PITRM1Q5JRX3 1037 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 LRRC73Q5JTD7 316 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 FAM26FQ5R3K3 315 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 MANEAQ5SRI9 462 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 C9orf64Q5T6V5 341 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 AGBL4Q5VU57 503 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 RNF219Q5W0B1 726 aaPredicted RBP3.74□□□□□ -1.81
USP46-205ENST00000504078 ARL6IP4Q66PJ3 421 aaKnown RBP3.74□□□□□ -1.81
USP46-205ENST00000504078 RBM44Q6ZP01 1051 aaKnown RBP3.74□□□□□ -1.81
USP46-205ENST00000504078 USP30Q70CQ3 517 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 SND1Q7KZF4 910 aaKnown RBP eCLIP3.74□□□□□ -1.81
USP46-205ENST00000504078 SV2BQ7L1I2 683 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 PRPF39Q86UA1 669 aaKnown RBP3.74□□□□□ -1.81
USP46-205ENST00000504078 PIGZQ86VD9 579 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 CHSY1Q86X52 802 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 CCDC65Q8IXS2 484 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 SLC35F3Q8IY50 421 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 APCDD1Q8J025 514 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 SDR16C5Q8N3Y7 309 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 CPXM2Q8N436 756 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 OXR1Q8N573 874 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.74□□□□□ -1.81
USP46-205ENST00000504078 KYQ8NBH2 561 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 XXYLT1Q8NBI6 393 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 GRIN3AQ8TCU5 1115 aa3.74□□□□□ -1.81
USP46-205ENST00000504078 LMX1AQ8TE12 382 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms