RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 UTP15Q8TED0 518 aaKnown RBP16.35■□□□□ 0.21
HMGXB3-202ENST00000503427 PWWP2AQ96N64 755 aa16.35■□□□□ 0.21
HMGXB3-202ENST00000503427 CD3EAPO15446 510 aaKnown RBP16.35■□□□□ 0.21
HMGXB3-202ENST00000503427 DDX3YO15523 660 aaKnown RBP16.35■□□□□ 0.21
HMGXB3-202ENST00000503427 GJB1P08034 283 aa16.35■□□□□ 0.21
HMGXB3-202ENST00000503427 CD52P31358 61 aa16.35■□□□□ 0.21
HMGXB3-202ENST00000503427 CRADDP78560 199 aa16.35■□□□□ 0.21
HMGXB3-202ENST00000503427 GPSM1Q86YR5 675 aa16.35■□□□□ 0.21
HMGXB3-202ENST00000503427 TRIM48Q8IWZ4 208 aa16.35■□□□□ 0.21
HMGXB3-202ENST00000503427 REM2Q8IYK8 340 aaPredicted RBP16.35■□□□□ 0.21
HMGXB3-202ENST00000503427 RP9Q8TA86 221 aaKnown RBP16.35■□□□□ 0.21
HMGXB3-202ENST00000503427 PANX3Q96QZ0 392 aa16.35■□□□□ 0.21
HMGXB3-202ENST00000503427 LHX5Q9H2C1 402 aa16.35■□□□□ 0.21
HMGXB3-202ENST00000503427 MRPL17Q9NRX2 175 aaKnown RBP16.35■□□□□ 0.21
HMGXB3-202ENST00000503427 SH3BP4Q9P0V3 963 aa16.35■□□□□ 0.21
HMGXB3-202ENST00000503427 MAFBQ9Y5Q3 323 aaPredicted RBP16.35■□□□□ 0.21
HMGXB3-202ENST00000503427 BANF1O75531 89 aa16.35■□□□□ 0.21
HMGXB3-202ENST00000503427 KRT36O76013 467 aa16.35■□□□□ 0.21
HMGXB3-202ENST00000503427 ANXA6P08133 673 aa16.35■□□□□ 0.21
HMGXB3-202ENST00000503427 ITGB6P18564 788 aa16.35■□□□□ 0.21
HMGXB3-202ENST00000503427 PPP2R1BP30154 601 aa16.35■□□□□ 0.21
HMGXB3-202ENST00000503427 MFSD5Q6N075 450 aa16.35■□□□□ 0.21
HMGXB3-202ENST00000503427 RDH11Q8TC12 318 aa16.35■□□□□ 0.21
HMGXB3-202ENST00000503427 MCOLN3Q8TDD5 553 aa16.35■□□□□ 0.21
HMGXB3-202ENST00000503427 DHX33Q9H6R0 707 aaKnown RBP16.35■□□□□ 0.21
HMGXB3-202ENST00000503427 CATSPERZQ9NTU4 200 aa16.35■□□□□ 0.21
HMGXB3-202ENST00000503427 C6orf203Q9P0P8 240 aaPredicted RBP16.35■□□□□ 0.21
HMGXB3-202ENST00000503427 DUSP12Q9UNI6 340 aa16.35■□□□□ 0.21
HMGXB3-202ENST00000503427 CRYL1Q9Y2S2 319 aa16.35■□□□□ 0.21
HMGXB3-202ENST00000503427 ANPEPP15144 967 aa16.34■□□□□ 0.21
HMGXB3-202ENST00000503427 PBLDP30039 288 aaPredicted RBP16.34■□□□□ 0.21
HMGXB3-202ENST00000503427 GABRB2P47870 512 aa16.34■□□□□ 0.21
HMGXB3-202ENST00000503427 CLCN5P51795 746 aa16.34■□□□□ 0.21
HMGXB3-202ENST00000503427 NAA20P61599 178 aa16.34■□□□□ 0.21
HMGXB3-202ENST00000503427 NOL9Q5SY16 702 aaKnown RBP16.34■□□□□ 0.21
HMGXB3-202ENST00000503427 B3GNT6Q6ZMB0 384 aa16.34■□□□□ 0.21
HMGXB3-202ENST00000503427 PIWIL4Q7Z3Z4 852 aaKnown RBP16.34■□□□□ 0.21
HMGXB3-202ENST00000503427 PTPRHQ9HD43 1115 aa16.34■□□□□ 0.21
HMGXB3-202ENST00000503427 ADPRHL2Q9NX46 363 aa16.34■□□□□ 0.21
HMGXB3-202ENST00000503427 DAPK2Q9UIK4 370 aa16.34■□□□□ 0.21
HMGXB3-202ENST00000503427 RAP2CQ9Y3L5 183 aa16.34■□□□□ 0.21
HMGXB3-202ENST00000503427 HDAC3O15379 428 aa16.34■□□□□ 0.21
HMGXB3-202ENST00000503427 GSTM1P09488 218 aa16.34■□□□□ 0.21
HMGXB3-202ENST00000503427 FMO4P31512 558 aa16.34■□□□□ 0.21
HMGXB3-202ENST00000503427 FLT3LGP49771 235 aa16.34■□□□□ 0.21
HMGXB3-202ENST00000503427 IL2P60568 153 aa16.34■□□□□ 0.21
HMGXB3-202ENST00000503427 ADAM30Q9UKF2 790 aa16.34■□□□□ 0.21
HMGXB3-202ENST00000503427 TCRBV9S1A1TA0A576 114 aa16.34■□□□□ 0.21
HMGXB3-202ENST00000503427 WFS1O76024 890 aa16.34■□□□□ 0.21
HMGXB3-202ENST00000503427 ITGA2BP08514 1039 aa16.34■□□□□ 0.21
HMGXB3-202ENST00000503427 SNRPB2P08579 225 aaKnown RBP16.34■□□□□ 0.21
HMGXB3-202ENST00000503427 ABCG1P45844 678 aa16.34■□□□□ 0.21
HMGXB3-202ENST00000503427 HECTD3Q5T447 861 aa16.34■□□□□ 0.21
HMGXB3-202ENST00000503427 ARHGAP22Q7Z5H3 698 aa16.34■□□□□ 0.21
HMGXB3-202ENST00000503427 OR8H2Q8N162 312 aa16.34■□□□□ 0.21
HMGXB3-202ENST00000503427 ZNF384Q8TF68 577 aa16.34■□□□□ 0.21
HMGXB3-202ENST00000503427 STARD8Q92502 1023 aa16.34■□□□□ 0.21
HMGXB3-202ENST00000503427 CNGB3Q9NQW8 809 aa16.34■□□□□ 0.21
HMGXB3-202ENST00000503427 STK39Q9UEW8 545 aa16.34■□□□□ 0.21
HMGXB3-202ENST00000503427 KLHL20Q9Y2M5 609 aa16.34■□□□□ 0.21
HMGXB3-202ENST00000503427 NR2E3Q9Y5X4 410 aa16.34■□□□□ 0.21
HMGXB3-202ENST00000503427 SPEF2Q9C093 1822 aa16.34■□□□□ 0.21
HMGXB3-202ENST00000503427 MED26O95402 600 aa16.34■□□□□ 0.21
HMGXB3-202ENST00000503427 OR56A5P0C7T3 313 aa16.34■□□□□ 0.21
HMGXB3-202ENST00000503427 ATP6V1C1P21283 382 aa16.34■□□□□ 0.21
HMGXB3-202ENST00000503427 ARL2P36404 184 aa16.34■□□□□ 0.21
HMGXB3-202ENST00000503427 FLT3P36888 993 aa16.34■□□□□ 0.21
HMGXB3-202ENST00000503427 GRIA4P48058 902 aa16.34■□□□□ 0.21
HMGXB3-202ENST00000503427 FBXW8Q8N3Y1 598 aa16.34■□□□□ 0.21
HMGXB3-202ENST00000503427 MYLPFQ96A32 169 aa16.34■□□□□ 0.21
HMGXB3-202ENST00000503427 TMEM159Q96B96 161 aa16.34■□□□□ 0.21
HMGXB3-202ENST00000503427 CEP44Q9C0F1 390 aa16.34■□□□□ 0.21
HMGXB3-202ENST00000503427 RNF19AQ9NV58 838 aa16.34■□□□□ 0.21
HMGXB3-202ENST00000503427 ZNF112Q9UJU3 913 aa16.34■□□□□ 0.21
HMGXB3-202ENST00000503427 TMEM88BA6NKF7 163 aa16.33■□□□□ 0.21
HMGXB3-202ENST00000503427 S100A3P33764 101 aa16.33■□□□□ 0.21
HMGXB3-202ENST00000503427 FAM45AQ8TCE6 357 aa16.33■□□□□ 0.21
HMGXB3-202ENST00000503427 HELQQ8TDG4 1101 aa16.33■□□□□ 0.21
HMGXB3-202ENST00000503427 GRIP2Q9C0E4 1043 aa16.33■□□□□ 0.21
HMGXB3-202ENST00000503427 ALG9Q9H6U8 611 aa16.33■□□□□ 0.21
HMGXB3-202ENST00000503427 CACNA2D2Q9NY47 1150 aa16.33■□□□□ 0.21
HMGXB3-202ENST00000503427 KCPQ6ZWJ8 1503 aa16.33■□□□□ 0.21
HMGXB3-202ENST00000503427 ALDH1A2O94788 518 aa16.33■□□□□ 0.21
HMGXB3-202ENST00000503427 CSH1P0DML2 217 aa16.33■□□□□ 0.21
HMGXB3-202ENST00000503427 CSH2P0DML3 217 aa16.33■□□□□ 0.21
HMGXB3-202ENST00000503427 C21orf59P57076 290 aa16.33■□□□□ 0.21
HMGXB3-202ENST00000503427 DGUOKQ16854 277 aa16.33■□□□□ 0.21
HMGXB3-202ENST00000503427 ZC3H12AQ5D1E8 599 aaKnown RBP16.33■□□□□ 0.21
HMGXB3-202ENST00000503427 TTC27Q6P3X3 843 aa16.33■□□□□ 0.21
HMGXB3-202ENST00000503427 AAGABQ6PD74 315 aa16.33■□□□□ 0.21
HMGXB3-202ENST00000503427 SLC41A1Q8IVJ1 513 aa16.33■□□□□ 0.21
HMGXB3-202ENST00000503427 NKAPQ8N5F7 415 aaKnown RBP16.33■□□□□ 0.21
HMGXB3-202ENST00000503427 TRPC4APQ8TEL6 797 aa16.33■□□□□ 0.21
HMGXB3-202ENST00000503427 PRDM12Q9H4Q4 367 aa16.33■□□□□ 0.21
HMGXB3-202ENST00000503427 FAM124BQ9H5Z6 455 aaPredicted RBP16.33■□□□□ 0.21
HMGXB3-202ENST00000503427 OPTCQ9UBM4 332 aa16.33■□□□□ 0.21
HMGXB3-202ENST00000503427 DNMT3LQ9UJW3 386 aa16.33■□□□□ 0.21
HMGXB3-202ENST00000503427 TMEM191CA6NGB0 347 aa16.33■□□□□ 0.2
HMGXB3-202ENST00000503427 CCDC166P0CW27 439 aa16.33■□□□□ 0.2
HMGXB3-202ENST00000503427 NFKB1P19838 968 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms