RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 RTL3Q8N8U3 475 aaKnown RBP11.77□□□□□ -0.53
USP46-204ENST00000503060 C10orf82Q8WW14 230 aa11.77□□□□□ -0.53
USP46-204ENST00000503060 ZNF669Q96BR6 464 aaPredicted RBP11.77□□□□□ -0.53
USP46-204ENST00000503060 SPATS2LQ9NUQ6 558 aaKnown RBP11.77□□□□□ -0.53
USP46-204ENST00000503060 NDFIP2Q9NV92 336 aa11.77□□□□□ -0.53
USP46-204ENST00000503060 FAM92AA1XBS5 289 aa11.76□□□□□ -0.53
USP46-204ENST00000503060 PITPNM1O00562 1244 aa11.76□□□□□ -0.53
USP46-204ENST00000503060 MAFKO60675 156 aa11.76□□□□□ -0.53
USP46-204ENST00000503060 SNUPNO95149 360 aaKnown RBP11.76□□□□□ -0.53
USP46-204ENST00000503060 ERVK-10P10266 1014 aa11.76□□□□□ -0.53
USP46-204ENST00000503060 SLC2A3P11169 496 aa11.76□□□□□ -0.53
USP46-204ENST00000503060 CCNB1P14635 433 aa11.76□□□□□ -0.53
USP46-204ENST00000503060 YWHAQP27348 245 aa11.76□□□□□ -0.53
USP46-204ENST00000503060 BNIP1Q12981 228 aa11.76□□□□□ -0.53
USP46-204ENST00000503060 FRG1Q14331 258 aaKnown RBP11.76□□□□□ -0.53
USP46-204ENST00000503060 RCN1Q15293 331 aa11.76□□□□□ -0.53
USP46-204ENST00000503060 CERCAMQ5T4B2 595 aa11.76□□□□□ -0.53
USP46-204ENST00000503060 PIK3R6Q5UE93 754 aa11.76□□□□□ -0.53
USP46-204ENST00000503060 AFMIDQ63HM1 303 aa11.76□□□□□ -0.53
USP46-204ENST00000503060 TMEM135Q86UB9 458 aa11.76□□□□□ -0.53
USP46-204ENST00000503060 ANKLE1Q8NAG6 615 aa11.76□□□□□ -0.53
USP46-204ENST00000503060 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.76□□□□□ -0.53
USP46-204ENST00000503060 ARMC2Q8NEN0 867 aa11.76□□□□□ -0.53
USP46-204ENST00000503060 GPR152Q8TDT2 470 aa11.76□□□□□ -0.53
USP46-204ENST00000503060 ACMSDQ8TDX5 336 aa11.76□□□□□ -0.53
USP46-204ENST00000503060 FBXO32Q969P5 355 aa11.76□□□□□ -0.53
USP46-204ENST00000503060 MOGAT1Q96PD6 335 aa11.76□□□□□ -0.53
USP46-204ENST00000503060 IL12RB2Q99665 862 aa11.76□□□□□ -0.53
USP46-204ENST00000503060 APOL2Q9BQE5 337 aa11.76□□□□□ -0.53
USP46-204ENST00000503060 TSSK1BQ9BXA7 367 aa11.76□□□□□ -0.53
USP46-204ENST00000503060 SLC40A1Q9NP59 571 aa11.76□□□□□ -0.53
USP46-204ENST00000503060 UBP1Q9NZI7 540 aa11.76□□□□□ -0.53
USP46-204ENST00000503060 MPP6Q9NZW5 540 aa11.76□□□□□ -0.53
USP46-204ENST00000503060 ZFATQ9P243 1243 aa11.76□□□□□ -0.53
USP46-204ENST00000503060 PSAT1Q9Y617 370 aa11.76□□□□□ -0.53
USP46-204ENST00000503060 MTMR11A4FU01 709 aa11.76□□□□□ -0.53
USP46-204ENST00000503060 WASH4PA8MWX3 477 aa11.76□□□□□ -0.53
USP46-204ENST00000503060 MATN3O15232 486 aa11.76□□□□□ -0.53
USP46-204ENST00000503060 SOAT2O75908 522 aa11.76□□□□□ -0.53
USP46-204ENST00000503060 USP1O94782 785 aa11.76□□□□□ -0.53
USP46-204ENST00000503060 RTN3O95197 1032 aaPredicted RBP11.76□□□□□ -0.53
USP46-204ENST00000503060 TROVE2P10155 538 aaKnown RBP eCLIP11.76□□□□□ -0.53
USP46-204ENST00000503060 CPB1P15086 417 aa11.76□□□□□ -0.53
USP46-204ENST00000503060 VEGFBP49765 207 aa11.76□□□□□ -0.53
USP46-204ENST00000503060 NCALDP61601 193 aa11.76□□□□□ -0.53
USP46-204ENST00000503060 EFEMP1Q12805 493 aa11.76□□□□□ -0.53
USP46-204ENST00000503060 GPR17Q13304 367 aa11.76□□□□□ -0.53
USP46-204ENST00000503060 ANKRD20A4Q4UJ75 823 aa11.76□□□□□ -0.53
USP46-204ENST00000503060 NAPEPLDQ6IQ20 393 aa11.76□□□□□ -0.53
USP46-204ENST00000503060 RSPO2Q6UXX9 243 aaPredicted RBP11.76□□□□□ -0.53
USP46-204ENST00000503060 SPPL2BQ8TCT7 592 aa11.76□□□□□ -0.53
USP46-204ENST00000503060 FCRL5Q96RD9 977 aa11.76□□□□□ -0.53
USP46-204ENST00000503060 UNC93B1Q9H1C4 597 aa11.76□□□□□ -0.53
USP46-204ENST00000503060 GLOD4Q9HC38 313 aa11.76□□□□□ -0.53
USP46-204ENST00000503060 NPHS2Q9NP85 383 aa11.76□□□□□ -0.53
USP46-204ENST00000503060 IL1RAPL1Q9NZN1 696 aa11.76□□□□□ -0.53
USP46-204ENST00000503060 SLC27A5Q9Y2P5 690 aa11.76□□□□□ -0.53
USP46-204ENST00000503060 ZCWPW2A0A1B0GU75 182 aa11.75□□□□□ -0.53
USP46-204ENST00000503060 FAM237BA0A1B0GVD1 139 aa11.75□□□□□ -0.53
USP46-204ENST00000503060 MAGEB16A2A368 324 aa11.75□□□□□ -0.53
USP46-204ENST00000503060 M0QX08 132 aa11.75□□□□□ -0.53
USP46-204ENST00000503060 AP3B1O00203 1094 aa11.75□□□□□ -0.53
USP46-204ENST00000503060 KLF11O14901 512 aa11.75□□□□□ -0.53
USP46-204ENST00000503060 HGSO14964 777 aaPredicted RBP11.75□□□□□ -0.53
USP46-204ENST00000503060 ATP9BO43861 1147 aa11.75□□□□□ -0.53
USP46-204ENST00000503060 TBC1D4O60343 1298 aa11.75□□□□□ -0.53
USP46-204ENST00000503060 SNX2O60749 519 aa11.75□□□□□ -0.53
USP46-204ENST00000503060 VNN2O95498 520 aa11.75□□□□□ -0.53
USP46-204ENST00000503060 IL1BP01584 269 aa11.75□□□□□ -0.53
USP46-204ENST00000503060 ITGA2BP08514 1039 aa11.75□□□□□ -0.53
USP46-204ENST00000503060 ALDH3A1P30838 453 aa11.75□□□□□ -0.53
USP46-204ENST00000503060 GP5P40197 560 aa11.75□□□□□ -0.53
USP46-204ENST00000503060 CDH17Q12864 832 aa11.75□□□□□ -0.53
USP46-204ENST00000503060 ELAVL2Q12926 359 aaKnown RBP11.75□□□□□ -0.53
USP46-204ENST00000503060 SMAD1Q15797 465 aaKnown RBP11.75□□□□□ -0.53
USP46-204ENST00000503060 RTP2Q5QGT7 225 aa11.75□□□□□ -0.53
USP46-204ENST00000503060 PLBD1Q6P4A8 553 aa11.75□□□□□ -0.53
USP46-204ENST00000503060 LINC00523Q86TU6 105 aa11.75□□□□□ -0.53
USP46-204ENST00000503060 CRIPAKQ8N1N5 446 aa11.75□□□□□ -0.53
USP46-204ENST00000503060 ZNF398Q8TD17 642 aa11.75□□□□□ -0.53
USP46-204ENST00000503060 CPNE1Q99829 537 aa11.75□□□□□ -0.53
USP46-204ENST00000503060 TMEM175Q9BSA9 504 aa11.75□□□□□ -0.53
USP46-204ENST00000503060 MRPL9Q9BYD2 267 aaKnown RBP11.75□□□□□ -0.53
USP46-204ENST00000503060 PPP1R12CQ9BZL4 782 aa11.75□□□□□ -0.53
USP46-204ENST00000503060 IL22Q9GZX6 179 aa11.75□□□□□ -0.53
USP46-204ENST00000503060 ECT2Q9H8V3 914 aa11.75□□□□□ -0.53
USP46-204ENST00000503060 FNIP2Q9P278 1114 aa11.75□□□□□ -0.53
USP46-204ENST00000503060 GTF2A1LQ9UNN4 478 aa11.75□□□□□ -0.53
USP46-204ENST00000503060 CHKBQ9Y259 395 aa11.75□□□□□ -0.53
USP46-204ENST00000503060 SSX2IPQ9Y2D8 614 aa11.75□□□□□ -0.53
USP46-204ENST00000503060 HTTP42858 3142 aa11.75□□□□□ -0.53
USP46-204ENST00000503060 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.75□□□□□ -0.53
USP46-204ENST00000503060 NT5C1B-RDH14C9J2C7 533 aa11.75□□□□□ -0.53
USP46-204ENST00000503060 H7C4K7 107 aa11.75□□□□□ -0.53
USP46-204ENST00000503060 TPP1O14773 563 aa11.75□□□□□ -0.53
USP46-204ENST00000503060 RASSF9O75901 435 aa11.75□□□□□ -0.53
USP46-204ENST00000503060 DCTN3O75935 186 aa11.75□□□□□ -0.53
USP46-204ENST00000503060 ALDOAP04075 364 aaKnown RBP11.75□□□□□ -0.53
USP46-204ENST00000503060 GALTP07902 379 aa11.75□□□□□ -0.53
USP46-204ENST00000503060 TPH1P17752 444 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms