RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 TADA1Q96BN2 335 aa22.33■■□□□ 1.17
PTPN13-205ENST00000502971 SLC22A12Q96S37 553 aa22.33■■□□□ 1.17
PTPN13-205ENST00000502971 MRM3Q9HC36 420 aaKnown RBP22.33■■□□□ 1.17
PTPN13-205ENST00000502971 ALG13Q9NP73 1137 aaKnown RBP22.33■■□□□ 1.17
PTPN13-205ENST00000502971 TBC1D30Q9Y2I9 924 aa22.33■■□□□ 1.17
PTPN13-205ENST00000502971 CPQQ9Y646 472 aa22.33■■□□□ 1.17
PTPN13-205ENST00000502971 PDE4DIPQ5VU43 2346 aa22.33■■□□□ 1.16
PTPN13-205ENST00000502971 A0A0D9SEW6 157 aa22.32■■□□□ 1.16
PTPN13-205ENST00000502971 EBAG9O00559 213 aa22.32■■□□□ 1.16
PTPN13-205ENST00000502971 RHOCP08134 193 aa22.32■■□□□ 1.16
PTPN13-205ENST00000502971 VIMP08670 466 aaKnown RBP22.32■■□□□ 1.16
PTPN13-205ENST00000502971 ERVK-10P10266 1014 aa22.32■■□□□ 1.16
PTPN13-205ENST00000502971 PYGBP11216 843 aa22.32■■□□□ 1.16
PTPN13-205ENST00000502971 HOXD9P28356 352 aaPredicted RBP22.32■■□□□ 1.16
PTPN13-205ENST00000502971 ETFBP38117 255 aa22.32■■□□□ 1.16
PTPN13-205ENST00000502971 SHHQ15465 462 aa22.32■■□□□ 1.16
PTPN13-205ENST00000502971 SEPT7Q16181 437 aaKnown RBP22.32■■□□□ 1.16
PTPN13-205ENST00000502971 IL31Q6EBC2 164 aa22.32■■□□□ 1.16
PTPN13-205ENST00000502971 PPHLN1Q8NEY8 458 aaKnown RBP22.32■■□□□ 1.16
PTPN13-205ENST00000502971 ADAMTS19Q8TE59 1207 aa22.32■■□□□ 1.16
PTPN13-205ENST00000502971 GCNAQ96QF7 691 aa22.32■■□□□ 1.16
PTPN13-205ENST00000502971 KLF6Q99612 283 aaPredicted RBP22.32■■□□□ 1.16
PTPN13-205ENST00000502971 CPNE1Q99829 537 aa22.32■■□□□ 1.16
PTPN13-205ENST00000502971 POLR1EQ9GZS1 481 aaKnown RBP22.32■■□□□ 1.16
PTPN13-205ENST00000502971 ATP13A1Q9HD20 1204 aa22.32■■□□□ 1.16
PTPN13-205ENST00000502971 MKS1Q9NXB0 559 aa22.32■■□□□ 1.16
PTPN13-205ENST00000502971 OBSL1O75147 1896 aa22.32■■□□□ 1.16
PTPN13-205ENST00000502971 GREM1O60565 184 aa22.31■■□□□ 1.16
PTPN13-205ENST00000502971 LPXNO60711 386 aa22.31■■□□□ 1.16
PTPN13-205ENST00000502971 MMP2P08253 660 aa22.31■■□□□ 1.16
PTPN13-205ENST00000502971 CCNFP41002 786 aa22.31■■□□□ 1.16
PTPN13-205ENST00000502971 CD86P42081 329 aa22.31■■□□□ 1.16
PTPN13-205ENST00000502971 SGSHP51688 502 aa22.31■■□□□ 1.16
PTPN13-205ENST00000502971 NEK3P51956 506 aa22.31■■□□□ 1.16
PTPN13-205ENST00000502971 HNRNPH2P55795 449 aaKnown RBP22.31■■□□□ 1.16
PTPN13-205ENST00000502971 OXCT1P55809 520 aa22.31■■□□□ 1.16
PTPN13-205ENST00000502971 MAXP61244 160 aa22.31■■□□□ 1.16
PTPN13-205ENST00000502971 SLC7A9P82251 487 aa22.31■■□□□ 1.16
PTPN13-205ENST00000502971 ZNF235Q14590 738 aa22.31■■□□□ 1.16
PTPN13-205ENST00000502971 RFTN1Q14699 578 aaPredicted RBP22.31■■□□□ 1.16
PTPN13-205ENST00000502971 SLC1A5Q15758 541 aa22.31■■□□□ 1.16
PTPN13-205ENST00000502971 HHATQ5VTY9 493 aa22.31■■□□□ 1.16
PTPN13-205ENST00000502971 PLPP4Q5VZY2 271 aa22.31■■□□□ 1.16
PTPN13-205ENST00000502971 ZNF783Q6ZMS7 281 aa22.31■■□□□ 1.16
PTPN13-205ENST00000502971 Q6ZNB5 142 aa22.31■■□□□ 1.16
PTPN13-205ENST00000502971 HS6ST3Q8IZP7 471 aa22.31■■□□□ 1.16
PTPN13-205ENST00000502971 PGBD5Q8N414 524 aa22.31■■□□□ 1.16
PTPN13-205ENST00000502971 OR7D4Q8NG98 312 aa22.31■■□□□ 1.16
PTPN13-205ENST00000502971 ARRDC2Q8TBH0 407 aa22.31■■□□□ 1.16
PTPN13-205ENST00000502971 SPPL3Q8TCT6 385 aa22.31■■□□□ 1.16
PTPN13-205ENST00000502971 TCP10LQ8TDR4 215 aa22.31■■□□□ 1.16
PTPN13-205ENST00000502971 POF1BQ8WVV4 589 aa22.31■■□□□ 1.16
PTPN13-205ENST00000502971 MFSD3Q96ES6 412 aa22.31■■□□□ 1.16
PTPN13-205ENST00000502971 PAIP2Q9BPZ3 127 aaKnown RBP22.31■■□□□ 1.16
PTPN13-205ENST00000502971 TLR9Q9NR96 1032 aa22.31■■□□□ 1.16
PTPN13-205ENST00000502971 TXNDC16Q9P2K2 825 aa22.31■■□□□ 1.16
PTPN13-205ENST00000502971 CHD5Q8TDI0 1954 aa22.31■■□□□ 1.16
PTPN13-205ENST00000502971 CEP290O15078 2479 aa22.31■■□□□ 1.16
PTPN13-205ENST00000502971 HMX2A2RU54 273 aa22.31■■□□□ 1.16
PTPN13-205ENST00000502971 TCP11X1B4DZS4 312 aa22.31■■□□□ 1.16
PTPN13-205ENST00000502971 TSPAN3O60637 253 aa22.31■■□□□ 1.16
PTPN13-205ENST00000502971 RFPL1O75677 317 aa22.31■■□□□ 1.16
PTPN13-205ENST00000502971 GP5P40197 560 aa22.31■■□□□ 1.16
PTPN13-205ENST00000502971 CYP4F8P98187 520 aa22.31■■□□□ 1.16
PTPN13-205ENST00000502971 DSC2Q02487 901 aa22.31■■□□□ 1.16
PTPN13-205ENST00000502971 QPCTQ16769 361 aa22.31■■□□□ 1.16
PTPN13-205ENST00000502971 GRTP1Q5TC63 336 aa22.31■■□□□ 1.16
PTPN13-205ENST00000502971 GKAP1Q5VSY0 366 aaPredicted RBP22.31■■□□□ 1.16
PTPN13-205ENST00000502971 LVRNQ6Q4G3 990 aa22.31■■□□□ 1.16
PTPN13-205ENST00000502971 SPATS2Q86XZ4 545 aaKnown RBP22.31■■□□□ 1.16
PTPN13-205ENST00000502971 FAM217AQ8IXS0 508 aa22.31■■□□□ 1.16
PTPN13-205ENST00000502971 OR52K2Q8NGK3 314 aa22.31■■□□□ 1.16
PTPN13-205ENST00000502971 TGS1Q96RS0 853 aaKnown RBP22.31■■□□□ 1.16
PTPN13-205ENST00000502971 ACE2Q9BYF1 805 aaPredicted RBP22.31■■□□□ 1.16
PTPN13-205ENST00000502971 ASAH2Q9NR71 780 aa22.31■■□□□ 1.16
PTPN13-205ENST00000502971 LSM7Q9UK45 103 aaKnown RBP22.31■■□□□ 1.16
PTPN13-205ENST00000502971 ZNF510Q9Y2H8 683 aa22.31■■□□□ 1.16
PTPN13-205ENST00000502971 TYW5A2RUC4 315 aaKnown RBP22.3■■□□□ 1.16
PTPN13-205ENST00000502971 HIDE1A8MVS5 230 aa22.3■■□□□ 1.16
PTPN13-205ENST00000502971 C1RP00736 705 aa22.3■■□□□ 1.16
PTPN13-205ENST00000502971 NMBRP28336 390 aa22.3■■□□□ 1.16
PTPN13-205ENST00000502971 BMPR2Q13873 1038 aa22.3■■□□□ 1.16
PTPN13-205ENST00000502971 PCSK7Q16549 785 aa22.3■■□□□ 1.16
PTPN13-205ENST00000502971 PPM1LQ5SGD2 360 aa22.3■■□□□ 1.16
PTPN13-205ENST00000502971 MROH9Q5TGP6 573 aa22.3■■□□□ 1.16
PTPN13-205ENST00000502971 ALG1LQ6GMV1 187 aa22.3■■□□□ 1.16
PTPN13-205ENST00000502971 RGS9BPQ6ZS82 235 aa22.3■■□□□ 1.16
PTPN13-205ENST00000502971 SPON2Q9BUD6 331 aa22.3■■□□□ 1.16
PTPN13-205ENST00000502971 ATXN3LQ9H3M9 355 aa22.3■■□□□ 1.16
PTPN13-205ENST00000502971 UBA2Q9UBT2 640 aaPredicted RBP22.3■■□□□ 1.16
PTPN13-205ENST00000502971 PRKAG3Q9UGI9 489 aa22.3■■□□□ 1.16
PTPN13-205ENST00000502971 SEPT3Q9UH03 358 aa22.3■■□□□ 1.16
PTPN13-205ENST00000502971 GGA2Q9UJY4 613 aa22.3■■□□□ 1.16
PTPN13-205ENST00000502971 TCAF1Q9Y4C2 921 aa22.3■■□□□ 1.16
PTPN13-205ENST00000502971 TRAV19A0A0A6YYK7 116 aa22.29■■□□□ 1.16
PTPN13-205ENST00000502971 LINC01553A4QN01 128 aa22.29■■□□□ 1.16
PTPN13-205ENST00000502971 C5orf67F2Z3F1 127 aa22.29■■□□□ 1.16
PTPN13-205ENST00000502971 GFRA2O00451 464 aa22.29■■□□□ 1.16
PTPN13-205ENST00000502971 COPEO14579 308 aa22.29■■□□□ 1.16
PTPN13-205ENST00000502971 ADRA1DP25100 572 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms