RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	EBF3	Q9H4W6	596 aa		12.37	□□□□□ -0.43
MATR3-231	ENST00000502394	GLOD4	Q9HC38	313 aa		12.37	□□□□□ -0.43
MATR3-231	ENST00000502394	EIF2B3	Q9NR50	452 aa	Known RBP	12.37	□□□□□ -0.43
MATR3-231	ENST00000502394	RAB6B	Q9NRW1	208 aa		12.37	□□□□□ -0.43
MATR3-231	ENST00000502394	ABCB8	Q9NUT2	735 aa		12.37	□□□□□ -0.43
MATR3-231	ENST00000502394	RBM22	Q9NW64	420 aa	Known RBP eCLIP	12.37	□□□□□ -0.43	3e-17	■□□□□ 9
MATR3-231	ENST00000502394	KLHL8	Q9P2G9	620 aa	Predicted RBP	12.37	□□□□□ -0.43
MATR3-231	ENST00000502394	UBA2	Q9UBT2	640 aa	Predicted RBP	12.37	□□□□□ -0.43
MATR3-231	ENST00000502394	SLC27A6	Q9Y2P4	619 aa		12.37	□□□□□ -0.43
MATR3-231	ENST00000502394	ACTL7A	Q9Y615	435 aa		12.37	□□□□□ -0.43
MATR3-231	ENST00000502394	NUMBL	Q9Y6R0	609 aa		12.37	□□□□□ -0.43
MATR3-231	ENST00000502394	MUSK	O15146	869 aa		12.36	□□□□□ -0.43
MATR3-231	ENST00000502394	FAM153B	P0C7A2	387 aa		12.36	□□□□□ -0.43
MATR3-231	ENST00000502394	PABPC1	P11940	636 aa	Known RBP	12.36	□□□□□ -0.43
MATR3-231	ENST00000502394	CR2	P20023	1033 aa		12.36	□□□□□ -0.43
MATR3-231	ENST00000502394	PLTP	P55058	493 aa		12.36	□□□□□ -0.43
MATR3-231	ENST00000502394	CALCOCO2	Q13137	446 aa		12.36	□□□□□ -0.43
MATR3-231	ENST00000502394	RUNX3	Q13761	415 aa		12.36	□□□□□ -0.43
MATR3-231	ENST00000502394	CYTH1	Q15438	398 aa		12.36	□□□□□ -0.43
MATR3-231	ENST00000502394	FAM153C	Q494X1	144 aa		12.36	□□□□□ -0.43
MATR3-231	ENST00000502394	INO80D	Q53TQ3	878 aa	Predicted RBP	12.36	□□□□□ -0.43
MATR3-231	ENST00000502394	PITRM1	Q5JRX3	1037 aa		12.36	□□□□□ -0.43
MATR3-231	ENST00000502394	FAXC	Q5TGI0	409 aa		12.36	□□□□□ -0.43
MATR3-231	ENST00000502394	MARC1	Q5VT66	337 aa		12.36	□□□□□ -0.43
MATR3-231	ENST00000502394	TMEM215	Q68D42	235 aa		12.36	□□□□□ -0.43
MATR3-231	ENST00000502394	ITPRIPL1	Q6GPH6	555 aa		12.36	□□□□□ -0.43
MATR3-231	ENST00000502394	FBXO38	Q6PIJ6	1188 aa		12.36	□□□□□ -0.43
MATR3-231	ENST00000502394	PCGF5	Q86SE9	256 aa		12.36	□□□□□ -0.43
MATR3-231	ENST00000502394	ADIPOR2	Q86V24	386 aa		12.36	□□□□□ -0.43
MATR3-231	ENST00000502394	CCDC117	Q8IWD4	279 aa	Predicted RBP	12.36	□□□□□ -0.43
MATR3-231	ENST00000502394	PHTF2	Q8N3S3	785 aa		12.36	□□□□□ -0.43
MATR3-231	ENST00000502394	MCU	Q8NE86	351 aa		12.36	□□□□□ -0.43
MATR3-231	ENST00000502394	ARRDC2	Q8TBH0	407 aa		12.36	□□□□□ -0.43
MATR3-231	ENST00000502394	HLA-C	Q95604	372 aa		12.36	□□□□□ -0.43
MATR3-231	ENST00000502394	EXOC4	Q96A65	974 aa		12.36	□□□□□ -0.43
MATR3-231	ENST00000502394	TTC17	Q96AE7	1141 aa		12.36	□□□□□ -0.43
MATR3-231	ENST00000502394	OXNAD1	Q96HP4	312 aa	Predicted RBP	12.36	□□□□□ -0.43
MATR3-231	ENST00000502394	AGAP3	Q96P47	875 aa		12.36	□□□□□ -0.43
MATR3-231	ENST00000502394	PSKH2	Q96QS6	385 aa		12.36	□□□□□ -0.43
MATR3-231	ENST00000502394	MGME1	Q9BQP7	344 aa		12.36	□□□□□ -0.43
MATR3-231	ENST00000502394	MLPH	Q9BV36	600 aa	Predicted RBP	12.36	□□□□□ -0.43
MATR3-231	ENST00000502394	C2orf49	Q9BVC5	232 aa	Predicted RBP	12.36	□□□□□ -0.43
MATR3-231	ENST00000502394	PHF7	Q9BWX1	381 aa	Predicted RBP	12.36	□□□□□ -0.43
MATR3-231	ENST00000502394	TXLNGY	Q9BZA5	131 aa		12.36	□□□□□ -0.43
MATR3-231	ENST00000502394	FAM153A	Q9UHL3	310 aa		12.36	□□□□□ -0.43
MATR3-231	ENST00000502394	ANAPC5	Q9UJX4	755 aa		12.36	□□□□□ -0.43
MATR3-231	ENST00000502394	GGA2	Q9UJY4	613 aa		12.36	□□□□□ -0.43
MATR3-231	ENST00000502394	VPS28	Q9UK41	221 aa		12.36	□□□□□ -0.43
MATR3-231	ENST00000502394	COL4A2	P08572	1712 aa		12.35	□□□□□ -0.43
MATR3-231	ENST00000502394	MYO18A	Q92614	2054 aa	Known RBP	12.35	□□□□□ -0.43
MATR3-231	ENST00000502394	CBX4	O00257	560 aa		12.35	□□□□□ -0.43
MATR3-231	ENST00000502394	TRIM24	O15164	1050 aa		12.35	□□□□□ -0.43
MATR3-231	ENST00000502394	TULP3	O75386	442 aa		12.35	□□□□□ -0.43
MATR3-231	ENST00000502394	SUN1	O94901	812 aa		12.35	□□□□□ -0.43
MATR3-231	ENST00000502394	MMP2	P08253	660 aa		12.35	□□□□□ -0.43
MATR3-231	ENST00000502394	GDI1	P31150	447 aa		12.35	□□□□□ -0.43
MATR3-231	ENST00000502394	OPRD1	P41143	372 aa		12.35	□□□□□ -0.43
MATR3-231	ENST00000502394	EIF2D	P41214	584 aa	Known RBP	12.35	□□□□□ -0.43
MATR3-231	ENST00000502394	MAGEA3	P43357	314 aa		12.35	□□□□□ -0.43
MATR3-231	ENST00000502394	MMP13	P45452	471 aa		12.35	□□□□□ -0.43
MATR3-231	ENST00000502394	NUMB	P49757	651 aa		12.35	□□□□□ -0.43
MATR3-231	ENST00000502394	BASP1	P80723	227 aa	Known RBP	12.35	□□□□□ -0.43
MATR3-231	ENST00000502394	CDK16	Q00536	496 aa		12.35	□□□□□ -0.43
MATR3-231	ENST00000502394	NIPAL4	Q0D2K0	466 aa		12.35	□□□□□ -0.43
MATR3-231	ENST00000502394	MESP2	Q0VG99	397 aa		12.35	□□□□□ -0.43
MATR3-231	ENST00000502394	HLTF	Q14527	1009 aa	Known RBP eCLIP	12.35	□□□□□ -0.43
MATR3-231	ENST00000502394	IHH	Q14623	411 aa		12.35	□□□□□ -0.43
MATR3-231	ENST00000502394	BEND6	Q5SZJ8	279 aa	Predicted RBP	12.35	□□□□□ -0.43
MATR3-231	ENST00000502394	EMB	Q6PCB8	327 aa		12.35	□□□□□ -0.43
MATR3-231	ENST00000502394	LEKR1	Q6ZMV7	388 aa		12.35	□□□□□ -0.43
MATR3-231	ENST00000502394	ZNF534	Q76KX8	674 aa		12.35	□□□□□ -0.43
MATR3-231	ENST00000502394	ZNF354C	Q86Y25	554 aa		12.35	□□□□□ -0.43
MATR3-231	ENST00000502394	YAF2	Q8IY57	180 aa		12.35	□□□□□ -0.43
MATR3-231	ENST00000502394	CPA6	Q8N4T0	437 aa		12.35	□□□□□ -0.43
MATR3-231	ENST00000502394	ZCCHC9	Q8N567	271 aa	Known RBP	12.35	□□□□□ -0.43
MATR3-231	ENST00000502394	TAB3	Q8N5C8	712 aa	Predicted RBP	12.35	□□□□□ -0.43
MATR3-231	ENST00000502394	WFIKKN2	Q8TEU8	576 aa		12.35	□□□□□ -0.43
MATR3-231	ENST00000502394	NSMCE1	Q8WV22	266 aa		12.35	□□□□□ -0.43
MATR3-231	ENST00000502394	CAVIN3	Q969G5	261 aa		12.35	□□□□□ -0.43
MATR3-231	ENST00000502394	XPO6	Q96QU8	1125 aa	Known RBP	12.35	□□□□□ -0.43
MATR3-231	ENST00000502394	FMO2	Q99518	471 aa		12.35	□□□□□ -0.43
MATR3-231	ENST00000502394	TRMT61B	Q9BVS5	477 aa	Known RBP	12.35	□□□□□ -0.43
MATR3-231	ENST00000502394	FOXP3	Q9BZS1	431 aa		12.35	□□□□□ -0.43
MATR3-231	ENST00000502394	PHACTR1	Q9C0D0	580 aa		12.35	□□□□□ -0.43
MATR3-231	ENST00000502394	SLC25A51	Q9H1U9	297 aa		12.35	□□□□□ -0.43
MATR3-231	ENST00000502394	NT5M	Q9NPB1	228 aa		12.35	□□□□□ -0.43
MATR3-231	ENST00000502394	LHX3	Q9UBR4	397 aa		12.35	□□□□□ -0.43
MATR3-231	ENST00000502394	SEPT3	Q9UH03	358 aa		12.35	□□□□□ -0.43
MATR3-231	ENST00000502394	RSPH14	Q9UHP6	348 aa		12.35	□□□□□ -0.43
MATR3-231	ENST00000502394	HPCAL4	Q9UM19	191 aa		12.35	□□□□□ -0.43
MATR3-231	ENST00000502394	HS3ST2	Q9Y278	367 aa		12.35	□□□□□ -0.43
MATR3-231	ENST00000502394	KIAA1549L	Q6ZVL6	1849 aa		12.34	□□□□□ -0.43
MATR3-231	ENST00000502394		E7ESA3	106 aa		12.34	□□□□□ -0.43
MATR3-231	ENST00000502394	TMCC1	O94876	653 aa		12.34	□□□□□ -0.43
MATR3-231	ENST00000502394	AP2A1	O95782	977 aa		12.34	□□□□□ -0.43
MATR3-231	ENST00000502394	MT-CO1	P00395	513 aa		12.34	□□□□□ -0.43
MATR3-231	ENST00000502394	GJA4	P35212	333 aa		12.34	□□□□□ -0.43
MATR3-231	ENST00000502394	HSPA9	P38646	679 aa	Known RBP	12.34	□□□□□ -0.43
MATR3-231	ENST00000502394	CTSO	P43234	321 aa	Predicted RBP	12.34	□□□□□ -0.43
MATR3-231	ENST00000502394	RGR	P47804	291 aa		12.34	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms