RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 PIP4K2AP48426 406 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 LIG4P49917 911 aa4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 PTTG1IPP53801 180 aa4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 WNT3P56703 355 aa4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 PTK6Q13882 451 aa4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 RTP5Q14D33 572 aa4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 RABEP1Q15276 862 aa4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 HFEQ30201 348 aa4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 AMOTQ4VCS5 1084 aa4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 TTC39AQ5SRH9 613 aa4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 GKAP1Q5VSY0 366 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 TOM1L2Q6ZVM7 507 aa4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 USP30Q70CQ3 517 aa4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 KBTBD6Q86V97 674 aa4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 ZNF280BQ86YH2 543 aa4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 Q8N3U1 123 aa4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 SFRP1Q8N474 314 aa4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 ANKRD53Q8N9V6 530 aa4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 OR14K1Q8NGZ2 314 aa4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 CEP76Q8TAP6 659 aa4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 MDM1Q8TC05 714 aa4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 MIEF2Q96C03 454 aa4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 INTS12Q96CB8 462 aaKnown RBP4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 SAAL1Q96ER3 474 aa4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 SAT2Q96F10 170 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 FAM227BQ96M60 508 aa4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 PKP4Q99569 1192 aa4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 SRSF8Q9BRL6 282 aaKnown RBP4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 SPATA5L1Q9BVQ7 753 aa4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 SLC6A15Q9H2J7 730 aa4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 BEX4Q9NWD9 120 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 DNMT3BQ9UBC3 853 aaKnown RBP4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 BAG5Q9UL15 447 aa4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 CNOT6Q9ULM6 557 aaKnown RBP4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 KCNK7Q9Y2U2 307 aa4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 NR2E1Q9Y466 385 aa4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 RGPD2P0DJD1 1756 aa4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 COL24A1Q17RW2 1714 aa4.49□□□□□ -1.69
HMGB1P21-201ENST00000502313 LRP5O75197 1615 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 CCDC187A0A096LP49 1063 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 AGAP5A6NIR3 686 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 AQP7P3A6NL99 342 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 OR6C76A6NM76 312 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 SLC38A8A6NNN8 435 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 M0QYT0 321 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 PGRMC2O15173 223 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 PRPF4O43172 522 aaKnown RBP eCLIP4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 CCP110O43303 1012 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 TADA2AO75478 443 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 SEC14L2O76054 403 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 SASH1O94885 1247 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 KLHL18O94889 574 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 SUPT20HL2P0C7V6 817 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 PIM1P11309 404 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 ACP5P13686 325 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 ATP5JP18859 108 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 NTSR1P30989 418 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 CCR10P46092 362 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 NT5C2P49902 561 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 CDK7P50613 346 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 LUMP51884 338 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 ZNF135P52742 658 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 CEBPZQ03701 1054 aaKnown RBP4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 RNASELQ05823 741 aaKnown RBP4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 COX10Q12887 443 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 AIMP2Q13155 320 aaKnown RBP4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 SP140Q13342 867 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 EZH2Q15910 746 aaKnown RBP4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 INSCQ1MX18 579 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 TYSND1Q2T9J0 566 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 ZIK1Q3SY52 487 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 SUPT20HL1Q3ZLR7 823 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 GAGE13Q4V321 117 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 SLC39A12Q504Y0 691 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 CEP55Q53EZ4 464 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 TOR1AIP1Q5JTV8 583 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 ZNF569Q5MCW4 686 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 SPDYAQ5MJ70 313 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 KIAA0930Q6ICG6 404 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 MSANTD2Q6P1R3 559 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 DENND1BQ6P3S1 775 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 TMEM270Q6UE05 265 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 MAMDC4Q6UXC1 1216 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 MEX3BQ6ZN04 569 aaKnown RBP4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 CLEC17AQ6ZS10 378 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 RGS9BPQ6ZS82 235 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 LPCAT2Q7L5N7 544 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 TMEM110Q86TL2 294 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 TRABD2AQ86V40 505 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 CNTN4Q8IWV2 1026 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 RNF168Q8IYW5 571 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 ZDHHC14Q8IZN3 488 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 BCL6BQ8N143 479 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 KLHL36Q8N4N3 616 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 ZNF366Q8N895 744 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 TMEM116Q8NCL8 245 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 NEK11Q8NG66 645 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 BRSK1Q8TDC3 778 aa4.48□□□□□ -1.69
HMGB1P21-201ENST00000502313 DUSP19Q8WTR2 217 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms