RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 DSG1Q02413 1049 aa10□□□□□ -0.81
CLIP1-204ENST00000501271 MGAT3Q09327 533 aa10□□□□□ -0.81
CLIP1-204ENST00000501271 TBL3Q12788 808 aaKnown RBP10□□□□□ -0.81
CLIP1-204ENST00000501271 CDC16Q13042 620 aa10□□□□□ -0.81
CLIP1-204ENST00000501271 LBRQ14739 615 aaKnown RBP10□□□□□ -0.81
CLIP1-204ENST00000501271 TAF1CQ15572 869 aaPredicted RBP10□□□□□ -0.81
CLIP1-204ENST00000501271 FSCBQ5H9T9 825 aa10□□□□□ -0.81
CLIP1-204ENST00000501271 PCID2Q5JVF3 399 aa10□□□□□ -0.81
CLIP1-204ENST00000501271 GNASQ5JWF2 1037 aa10□□□□□ -0.81
CLIP1-204ENST00000501271 TCHHL1Q5QJ38 904 aaPredicted RBP10□□□□□ -0.81
CLIP1-204ENST00000501271 MANEALQ5VSG8 457 aa10□□□□□ -0.81
CLIP1-204ENST00000501271 ESRP1Q6NXG1 681 aaKnown RBP10□□□□□ -0.81
CLIP1-204ENST00000501271 AAGABQ6PD74 315 aa10□□□□□ -0.81
CLIP1-204ENST00000501271 HPS6Q86YV9 775 aa10□□□□□ -0.81
CLIP1-204ENST00000501271 CEP97Q8IW35 865 aa10□□□□□ -0.81
CLIP1-204ENST00000501271 CNTN4Q8IWV2 1026 aa10□□□□□ -0.81
CLIP1-204ENST00000501271 SCML4Q8N228 414 aa10□□□□□ -0.81
CLIP1-204ENST00000501271 FSTL5Q8N475 847 aaPredicted RBP10□□□□□ -0.81
CLIP1-204ENST00000501271 UPF1Q92900 1129 aaKnown RBP eCLIP10□□□□□ -0.81
CLIP1-204ENST00000501271 SCYL1Q96KG9 808 aa10□□□□□ -0.81
CLIP1-204ENST00000501271 FCRL5Q96RD9 977 aa10□□□□□ -0.81
CLIP1-204ENST00000501271 IL12RB2Q99665 862 aa10□□□□□ -0.81
CLIP1-204ENST00000501271 GLOD4Q9HC38 313 aa10□□□□□ -0.81
CLIP1-204ENST00000501271 NSMCE4AQ9NXX6 385 aa10□□□□□ -0.81
CLIP1-204ENST00000501271 POMPQ9Y244 141 aa10□□□□□ -0.81
CLIP1-204ENST00000501271 RAP2CQ9Y3L5 183 aa10□□□□□ -0.81
CLIP1-204ENST00000501271 TARM1B6A8C7 271 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 AP3B1O00203 1094 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 PSMD3O43242 534 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 PIGNO95427 931 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 JUNP05412 331 aaKnown RBP9.99□□□□□ -0.81
CLIP1-204ENST00000501271 DNAJB2P25686 324 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 EPHA3P29320 983 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 CRABP2P29373 138 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 HOXC13P31276 330 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 CD52P31358 61 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 CYP2C18P33260 490 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 SERPINB5P36952 375 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 SLC1A2P43004 574 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 NAGLUP54802 743 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 DLG1Q12959 904 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 SLC12A1Q13621 1099 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 ARL13AQ5H913 290 aaPredicted RBP9.99□□□□□ -0.81
CLIP1-204ENST00000501271 PPM1LQ5SGD2 360 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 LRRC8EQ6NSJ5 796 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 MRPL10Q7Z7H8 261 aaKnown RBP9.99□□□□□ -0.81
CLIP1-204ENST00000501271 DHDDSQ86SQ9 333 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 SERINC5Q86VE9 423 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 METTL23Q86XA0 190 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 SPNS2Q8IVW8 549 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 SPATA6LQ8N4H0 392 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 RDH11Q8TC12 318 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 SLC26A7Q8TE54 656 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 STYXQ8WUJ0 223 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 CASP10Q92851 521 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 LENG8Q96PV6 779 aaPredicted RBP9.99□□□□□ -0.81
CLIP1-204ENST00000501271 ECSITQ9BQ95 431 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 MTG1Q9BT17 334 aaPredicted RBP9.99□□□□□ -0.81
CLIP1-204ENST00000501271 UNKQ9C0B0 810 aaKnown RBP9.99□□□□□ -0.81
CLIP1-204ENST00000501271 XPR1Q9UBH6 696 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 ZDHHC2Q9UIJ5 367 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 MID2Q9UJV3 735 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 NUDT5Q9UKK9 219 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 ARHGAP26Q9UNA1 814 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 RUVBL2Q9Y230 463 aaKnown RBP9.99□□□□□ -0.81
CLIP1-204ENST00000501271 SSX2IPQ9Y2D8 614 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 DOCK4Q8N1I0 1966 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 FAM95CA0A1B0GW59 222 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 HDAC3O15379 428 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 GRID2O43424 1007 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 DUSP11O75319 330 aaKnown RBP9.99□□□□□ -0.81
CLIP1-204ENST00000501271 PMPCBO75439 489 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 CABYRO75952 493 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 ADRA1AP35348 466 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 CHRNA4P43681 627 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 RPL14P50914 215 aaKnown RBP9.99□□□□□ -0.81
CLIP1-204ENST00000501271 SLC5A3P53794 718 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 LSM12Q3MHD2 195 aaKnown RBP9.99□□□□□ -0.81
CLIP1-204ENST00000501271 TSTD2Q5T7W7 516 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 METTL21CQ5VZV1 264 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 SEL1L3Q68CR1 1132 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 OVOS1Q6IE37 1185 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 TMC7Q7Z402 723 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 KDELC2Q7Z4H8 507 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 ADGRG6Q86SQ4 1221 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 LSMEM2Q8N112 164 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 FBXW8Q8N3Y1 598 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 HIPK4Q8NE63 616 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 PPHLN1Q8NEY8 458 aaKnown RBP9.99□□□□□ -0.81
CLIP1-204ENST00000501271 GATA6Q92908 595 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 FCRL2Q96LA5 508 aaPredicted RBP9.99□□□□□ -0.81
CLIP1-204ENST00000501271 TSNARE1Q96NA8 513 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 GPR78Q96P69 363 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 HAPLN3Q96S86 360 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 RTKNQ9BST9 563 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 NUF2Q9BZD4 464 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 YIPF3Q9GZM5 350 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 ATXN3LQ9H3M9 355 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 SMOC2Q9H3U7 446 aa9.99□□□□□ -0.81
CLIP1-204ENST00000501271 PADI3Q9ULW8 664 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms