RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 PRDM5Q9NQX1 630 aaPredicted RBP4.02□□□□□ -1.77
CLTC-209ENST00000498711 MAN1C1Q9NR34 630 aa4.02□□□□□ -1.77
CLTC-209ENST00000498711 SMYD2Q9NRG4 433 aa4.02□□□□□ -1.77
CLTC-209ENST00000498711 PCMTD2Q9NV79 361 aa4.02□□□□□ -1.77
CLTC-209ENST00000498711 FBXO28Q9NVF7 368 aa4.02□□□□□ -1.77
CLTC-209ENST00000498711 GPATCH2Q9NW75 528 aa4.02□□□□□ -1.77
CLTC-209ENST00000498711 DNAJC28Q9NX36 388 aa4.02□□□□□ -1.77
CLTC-209ENST00000498711 GGA3Q9NZ52 723 aa4.02□□□□□ -1.77
CLTC-209ENST00000498711 MOCS1Q9NZB8 636 aa4.02□□□□□ -1.77
CLTC-209ENST00000498711 CYTH4Q9UIA0 394 aa4.02□□□□□ -1.77
CLTC-209ENST00000498711 SCOCQ9UIL1 159 aa4.02□□□□□ -1.77
CLTC-209ENST00000498711 ZNF112Q9UJU3 913 aa4.02□□□□□ -1.77
CLTC-209ENST00000498711 ITGA11Q9UKX5 1188 aa4.02□□□□□ -1.77
CLTC-209ENST00000498711 TRBV23OR9-2A0A075B6M9 112 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 IGKV6-21A0A0C4DH24 114 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 CFAP69A5D8W1 941 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 FAM47E-STBD1D6RA91 191 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 F8W735 103 aaPredicted RBP4.01□□□□□ -1.77
CLTC-209ENST00000498711 PI4K2BG5E9Z4 385 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 DDX39AO00148 427 aaKnown RBP4.01□□□□□ -1.77
CLTC-209ENST00000498711 CAPN9O14815 690 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 XPOTO43592 962 aaKnown RBP4.01□□□□□ -1.77
CLTC-209ENST00000498711 B4GALT4O60513 344 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 LPXNO60711 386 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 BANF1O75531 89 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 SNRPAP09012 282 aaKnown RBP4.01□□□□□ -1.77
CLTC-209ENST00000498711 SUPT20HL2P0C7V6 817 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 MYL4P12829 197 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 ELNP15502 786 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 TPSB2P20231 275 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 BGNP21810 368 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 IL4RP24394 825 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 CNTFP26441 200 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 BMP8BP34820 402 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 PGM1P36871 562 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 ELK3P41970 407 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 RPL34P49207 117 aaKnown RBP4.01□□□□□ -1.77
CLTC-209ENST00000498711 VPS41P49754 854 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 CDK7P50613 346 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 RPS6P62753 249 aaKnown RBP4.01□□□□□ -1.77
CLTC-209ENST00000498711 YWHAZP63104 245 aaKnown RBP4.01□□□□□ -1.77
CLTC-209ENST00000498711 IKQ13123 557 aaPredicted RBP4.01□□□□□ -1.77
CLTC-209ENST00000498711 CDK5R2Q13319 367 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 NAB1Q13506 487 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 ITGA9Q13797 1035 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 GRM3Q14832 879 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 RBBP5Q15291 538 aaKnown RBP4.01□□□□□ -1.77
CLTC-209ENST00000498711 TPSAB1Q15661 275 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 INSCQ1MX18 579 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 ATG16L1Q676U5 607 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 CDPF1Q6NVV7 123 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 DNAJC24Q6P3W2 148 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 TMEM270Q6UE05 265 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 TREML4Q6UXN2 200 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 ZNF534Q76KX8 674 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 C16orf59Q7L2K0 433 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 TICAM1Q8IUC6 712 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 TMEM130Q8N3G9 435 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 ZNF655Q8N720 491 aaPredicted RBP4.01□□□□□ -1.77
CLTC-209ENST00000498711 DRAXINQ8NBI3 349 aaPredicted RBP4.01□□□□□ -1.77
CLTC-209ENST00000498711 RCBTB1Q8NDN9 531 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 RBM15BQ8NDT2 890 aaKnown RBP4.01□□□□□ -1.77
CLTC-209ENST00000498711 EZH1Q92800 747 aaPredicted RBP4.01□□□□□ -1.77
CLTC-209ENST00000498711 SIGLEC10Q96LC7 697 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 ZNF778Q96MU6 729 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 BTBD9Q96Q07 612 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 FAM118BQ9BPY3 351 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 GORASP1Q9BQQ3 440 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 SPATA16Q9BXB7 569 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 SLC12A9Q9BXP2 914 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 CEP41Q9BYV8 373 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 GLIS2Q9BZE0 524 aaPredicted RBP4.01□□□□□ -1.77
CLTC-209ENST00000498711 YIPF3Q9GZM5 350 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 NMUR2Q9GZQ4 415 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 IPPKQ9H8X2 491 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 RSAD1Q9HA92 442 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 PLK2Q9NYY3 685 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 NDUFA13Q9P0J0 144 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 DLGAP2Q9P1A6 1054 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 XPO7Q9UIA9 1087 aaKnown RBP4.01□□□□□ -1.77
CLTC-209ENST00000498711 CPSF3Q9UKF6 684 aaKnown RBP4.01□□□□□ -1.77
CLTC-209ENST00000498711 INVSQ9Y283 1065 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 LRRC37A2A6NM11 1700 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 ANK1P16157 1881 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 FAM237BA0A1B0GVD1 139 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 SHISA3A0PJX4 238 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 TGM5O43548 720 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 GCATO75600 419 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 RAD17O75943 681 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 ASNSP08243 561 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 CD48P09326 243 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 MYL2P10916 166 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 TGM2P21980 687 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 HARS2P49590 506 aaKnown RBP4.01□□□□□ -1.77
CLTC-209ENST00000498711 SERPINB9P50453 376 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 PHC1P78364 1004 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 SARNPP82979 210 aaKnown RBP4.01□□□□□ -1.77
CLTC-209ENST00000498711 NIPAL4Q0D2K0 466 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 PPIL2Q13356 520 aa4.01□□□□□ -1.77
CLTC-209ENST00000498711 LRRC32Q14392 662 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms