RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 C4orf50Q6ZRC1 276 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 FAM183BPQ6ZVS7 135 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 POLNQ7Z5Q5 900 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 ADGRD2Q7Z7M1 963 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 FAM124AQ86V42 546 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 SLC13A5Q86YT5 568 aaPredicted RBP5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 CCDC50Q8IVM0 306 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 IFT20Q8IY31 132 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 COLGALT2Q8IYK4 626 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 DCP1BQ8IZD4 617 aaKnown RBP5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 FUKQ8N0W3 1084 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 KRT222Q8N1A0 295 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 SIX6OS1Q8N1H7 587 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 HNRNPLLQ8WVV9 542 aaKnown RBP5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 RIN2Q8WYP3 895 aaPredicted RBP5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 KCTD13Q8WZ19 329 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 KRT35Q92764 455 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 SMARCD1Q96GM5 515 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 CASD1Q96PB1 797 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 KRT12Q99456 494 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 PAAF1Q9BRP4 392 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 TMEM175Q9BSA9 504 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 RTKNQ9BST9 563 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 CNPY3Q9BT09 278 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 LRRC1Q9BTT6 524 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 ZNF747Q9BV97 191 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 TRIM7Q9C029 511 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 TSPYL1Q9H0U9 437 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 PCED1AQ9H1Q7 454 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 VPS11Q9H270 941 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 ANKZF1Q9H8Y5 726 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 LRRC4Q9HBW1 653 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 ARFGAP3Q9NP61 516 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 RBM12Q9NTZ6 932 aaKnown RBP5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 TBC1D13Q9NVG8 400 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 EHD2Q9NZN4 543 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 FEZ2Q9UHY8 353 aaPredicted RBP5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 ANGPTL2Q9UKU9 493 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 INSL6Q9Y581 213 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 NME7Q9Y5B8 376 aa5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 TIMM13Q9Y5L4 95 aaPredicted RBP5.5□□□□□ -1.53
HMGXB4-208ENST00000498325 SMG1Q96Q15 3661 aaKnown RBP5.49□□□□□ -1.53
HMGXB4-208ENST00000498325 FRYQ5TBA9 3013 aa5.49□□□□□ -1.53
HMGXB4-208ENST00000498325 ABHD14A-ACY1A0A1B0GW23 586 aa5.49□□□□□ -1.53
HMGXB4-208ENST00000498325 MYBPHLA2RUH7 354 aa5.49□□□□□ -1.53
HMGXB4-208ENST00000498325 C2CD4BA6NLJ0 364 aa5.49□□□□□ -1.53
HMGXB4-208ENST00000498325 F8VP50 259 aa5.49□□□□□ -1.53
HMGXB4-208ENST00000498325 H7C4K7 107 aa5.49□□□□□ -1.53
HMGXB4-208ENST00000498325 I3L4J1 428 aa5.49□□□□□ -1.53
HMGXB4-208ENST00000498325 NRP1O14786 923 aa5.49□□□□□ -1.53
HMGXB4-208ENST00000498325 PAPSS1O43252 624 aaPredicted RBP5.49□□□□□ -1.53
HMGXB4-208ENST00000498325 HCRTO43612 131 aa5.49□□□□□ -1.53
HMGXB4-208ENST00000498325 PRPSAP2O60256 369 aa5.49□□□□□ -1.53
HMGXB4-208ENST00000498325 PHF2O75151 1096 aa5.49□□□□□ -1.53
HMGXB4-208ENST00000498325 TJP3O95049 919 aa5.49□□□□□ -1.53
HMGXB4-208ENST00000498325 GJB6O95452 261 aa5.49□□□□□ -1.53
HMGXB4-208ENST00000498325 GLP2RO95838 553 aa5.49□□□□□ -1.53
HMGXB4-208ENST00000498325 GLI4P10075 376 aa5.49□□□□□ -1.53
HMGXB4-208ENST00000498325 LCP1P13796 627 aa5.49□□□□□ -1.53
HMGXB4-208ENST00000498325 AOC1P19801 751 aa5.49□□□□□ -1.53
HMGXB4-208ENST00000498325 PCK1P35558 622 aa5.49□□□□□ -1.53
HMGXB4-208ENST00000498325 TAS2R40P59535 323 aa5.49□□□□□ -1.53
HMGXB4-208ENST00000498325 CAMK1Q14012 370 aa5.49□□□□□ -1.53
HMGXB4-208ENST00000498325 DHX34Q14147 1143 aaKnown RBP5.49□□□□□ -1.53
HMGXB4-208ENST00000498325 CDSNQ15517 529 aa5.49□□□□□ -1.53
HMGXB4-208ENST00000498325 NFE2Q16621 373 aaPredicted RBP5.49□□□□□ -1.53
HMGXB4-208ENST00000498325 PAN2Q504Q3 1202 aaKnown RBP5.49□□□□□ -1.53
HMGXB4-208ENST00000498325 BOLA3Q53S33 107 aa5.49□□□□□ -1.53
HMGXB4-208ENST00000498325 FAM171BQ6P995 826 aa5.49□□□□□ -1.53
HMGXB4-208ENST00000498325 CD300LGQ6UXG3 332 aa5.49□□□□□ -1.53
HMGXB4-208ENST00000498325 CCNI2Q6ZMN8 369 aaPredicted RBP5.49□□□□□ -1.53
HMGXB4-208ENST00000498325 ZNF771Q7L3S4 317 aaPredicted RBP5.49□□□□□ -1.53
HMGXB4-208ENST00000498325 SLC26A9Q7LBE3 791 aa5.49□□□□□ -1.53
HMGXB4-208ENST00000498325 PIGZQ86VD9 579 aa5.49□□□□□ -1.53
HMGXB4-208ENST00000498325 ZNF280BQ86YH2 543 aa5.49□□□□□ -1.53
HMGXB4-208ENST00000498325 SPATA2LQ8IUW3 424 aaPredicted RBP5.49□□□□□ -1.53
HMGXB4-208ENST00000498325 MAP7D3Q8IWC1 876 aa5.49□□□□□ -1.53
HMGXB4-208ENST00000498325 KLHL7Q8IXQ5 586 aa5.49□□□□□ -1.53
HMGXB4-208ENST00000498325 JOSD2Q8TAC2 188 aa5.49□□□□□ -1.53
HMGXB4-208ENST00000498325 GRK7Q8WTQ7 553 aa5.49□□□□□ -1.53
HMGXB4-208ENST00000498325 RXFP2Q8WXD0 754 aa5.49□□□□□ -1.53
HMGXB4-208ENST00000498325 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.49□□□□□ -1.53
HMGXB4-208ENST00000498325 SUSD6Q92537 303 aa5.49□□□□□ -1.53
HMGXB4-208ENST00000498325 MAGOHBQ96A72 148 aaKnown RBP5.49□□□□□ -1.53
HMGXB4-208ENST00000498325 PCED1BQ96HM7 432 aa5.49□□□□□ -1.53
HMGXB4-208ENST00000498325 CDK5RAP1Q96SZ6 601 aaKnown RBP5.49□□□□□ -1.53
HMGXB4-208ENST00000498325 TBCBQ99426 244 aa5.49□□□□□ -1.53
HMGXB4-208ENST00000498325 AP1M1Q9BXS5 423 aa5.49□□□□□ -1.53
HMGXB4-208ENST00000498325 MAK16Q9BXY0 300 aaKnown RBP5.49□□□□□ -1.53
HMGXB4-208ENST00000498325 LRRC3Q9BY71 257 aa5.49□□□□□ -1.53
HMGXB4-208ENST00000498325 B3GNT5Q9BYG0 378 aa5.49□□□□□ -1.53
HMGXB4-208ENST00000498325 OSBPL8Q9BZF1 889 aa5.49□□□□□ -1.53
HMGXB4-208ENST00000498325 RAB17Q9H0T7 212 aa5.49□□□□□ -1.53
HMGXB4-208ENST00000498325 EPC1Q9H2F5 836 aa5.49□□□□□ -1.53
HMGXB4-208ENST00000498325 NRDE2Q9H7Z3 1164 aa5.49□□□□□ -1.53
HMGXB4-208ENST00000498325 TMEM51Q9NW97 253 aa5.49□□□□□ -1.53
HMGXB4-208ENST00000498325 RRN3Q9NYV6 651 aa5.49□□□□□ -1.53
HMGXB4-208ENST00000498325 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.49□□□□□ -1.53
HMGXB4-208ENST00000498325 SMARCAL1Q9NZC9 954 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms