RNA–Protein interactions for RNA: ENST00000498213.1

USP54-217, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 815 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-217ENST00000498213 DKC1O60832 514 aaKnown RBP eCLIP4.3□□□□□ -1.72
USP54-217ENST00000498213 RPS6KA5O75582 802 aa4.3□□□□□ -1.72
USP54-217ENST00000498213 PRSS23O95084 383 aa4.3□□□□□ -1.72
USP54-217ENST00000498213 ESRRBO95718 433 aa4.3□□□□□ -1.72
USP54-217ENST00000498213 GLUD1P00367 558 aa4.3□□□□□ -1.72
USP54-217ENST00000498213 CYP3A4P08684 503 aa4.3□□□□□ -1.72
USP54-217ENST00000498213 POU2F2P09086 479 aa4.3□□□□□ -1.72
USP54-217ENST00000498213 ENGP17813 658 aa4.3□□□□□ -1.72
USP54-217ENST00000498213 CCND1P24385 295 aa4.3□□□□□ -1.72
USP54-217ENST00000498213 ELAVL4P26378 380 aaKnown RBP4.3□□□□□ -1.72
USP54-217ENST00000498213 HOXA6P31267 233 aa4.3□□□□□ -1.72
USP54-217ENST00000498213 SFNP31947 248 aa4.3□□□□□ -1.72
USP54-217ENST00000498213 MCM5P33992 734 aa4.3□□□□□ -1.72
USP54-217ENST00000498213 ADRA1BP35368 520 aa4.3□□□□□ -1.72
USP54-217ENST00000498213 DHPSP49366 369 aaPredicted RBP4.3□□□□□ -1.72
USP54-217ENST00000498213 ATXN3P54252 364 aaPredicted RBP4.3□□□□□ -1.72
USP54-217ENST00000498213 CTXN1P60606 82 aa4.3□□□□□ -1.72
USP54-217ENST00000498213 NOMO3P69849 1222 aa4.3□□□□□ -1.72
USP54-217ENST00000498213 SEMG2Q02383 582 aa4.3□□□□□ -1.72
USP54-217ENST00000498213 PREPLQ4J6C6 727 aaPredicted RBP4.3□□□□□ -1.72
USP54-217ENST00000498213 CEP55Q53EZ4 464 aa4.3□□□□□ -1.72
USP54-217ENST00000498213 NOMO2Q5JPE7 1267 aa4.3□□□□□ -1.72
USP54-217ENST00000498213 CLLU1OSQ5K130 101 aa4.3□□□□□ -1.72
USP54-217ENST00000498213 MARCH8Q5T0T0 291 aa4.3□□□□□ -1.72
USP54-217ENST00000498213 TANGO2Q6ICL3 276 aa4.3□□□□□ -1.72
USP54-217ENST00000498213 MIS18BP1Q6P0N0 1132 aa4.3□□□□□ -1.72
USP54-217ENST00000498213 CASC1Q6TDU7 716 aa4.3□□□□□ -1.72
USP54-217ENST00000498213 CWC27Q6UX04 472 aaKnown RBP4.3□□□□□ -1.72
USP54-217ENST00000498213 SYNE3Q6ZMZ3 975 aa4.3□□□□□ -1.72
USP54-217ENST00000498213 ZNF589Q86UQ0 364 aaPredicted RBP4.3□□□□□ -1.72
USP54-217ENST00000498213 FBXL16Q8N461 479 aa4.3□□□□□ -1.72
USP54-217ENST00000498213 CNNM3Q8NE01 707 aa4.3□□□□□ -1.72
USP54-217ENST00000498213 BICD2Q8TD16 824 aa4.3□□□□□ -1.72
USP54-217ENST00000498213 VOPP1Q96AW1 172 aa4.3□□□□□ -1.72
USP54-217ENST00000498213 PTCD3Q96EY7 689 aaKnown RBP4.3□□□□□ -1.72
USP54-217ENST00000498213 MCRS1Q96EZ8 462 aa4.3□□□□□ -1.72
USP54-217ENST00000498213 IGSF21Q96ID5 467 aa4.3□□□□□ -1.72
USP54-217ENST00000498213 BOD1Q96IK1 185 aa4.3□□□□□ -1.72
USP54-217ENST00000498213 MAP7D2Q96T17 732 aa4.3□□□□□ -1.72
USP54-217ENST00000498213 MXRA8Q9BRK3 442 aa4.3□□□□□ -1.72
USP54-217ENST00000498213 KIAA1586Q9HCI6 787 aa4.3□□□□□ -1.72
USP54-217ENST00000498213 UBN1Q9NPG3 1134 aa4.3□□□□□ -1.72
USP54-217ENST00000498213 MRPL17Q9NRX2 175 aaKnown RBP4.3□□□□□ -1.72
USP54-217ENST00000498213 PTGFRNQ9P2B2 879 aa4.3□□□□□ -1.72
USP54-217ENST00000498213 LRIT1Q9P2V4 623 aa4.3□□□□□ -1.72
USP54-217ENST00000498213 ST3GAL5Q9UNP4 418 aa4.3□□□□□ -1.72
USP54-217ENST00000498213 CDYLQ9Y232 598 aa4.3□□□□□ -1.72
USP54-217ENST00000498213 MAN2B2Q9Y2E5 1009 aa4.3□□□□□ -1.72
USP54-217ENST00000498213 PCDHA13Q9Y5I0 950 aa4.3□□□□□ -1.72
USP54-217ENST00000498213 C2orf16Q68DN1 1984 aa4.3□□□□□ -1.72
USP54-217ENST00000498213 KIAA1217Q5T5P2 1943 aa4.3□□□□□ -1.72
USP54-217ENST00000498213 LAMA4Q16363 1823 aa4.3□□□□□ -1.72
USP54-217ENST00000498213 MTORP42345 2549 aa4.29□□□□□ -1.72
USP54-217ENST00000498213 CNTNAP2Q9UHC6 1331 aa4.29□□□□□ -1.72
USP54-217ENST00000498213 ATMQ13315 3056 aa4.29□□□□□ -1.72
USP54-217ENST00000498213 SPG11Q96JI7 2443 aa4.29□□□□□ -1.72
USP54-217ENST00000498213 GSTTP1A0A1W2PQM5 241 aa4.29□□□□□ -1.72
USP54-217ENST00000498213 ALG1L2C9J202 215 aa4.29□□□□□ -1.72
USP54-217ENST00000498213 CYTH3O43739 400 aa4.29□□□□□ -1.72
USP54-217ENST00000498213 KATNA1O75449 491 aa4.29□□□□□ -1.72
USP54-217ENST00000498213 AKAP3O75969 853 aa4.29□□□□□ -1.72
USP54-217ENST00000498213 CD59P13987 128 aa4.29□□□□□ -1.72
USP54-217ENST00000498213 C5AR1P21730 350 aa4.29□□□□□ -1.72
USP54-217ENST00000498213 LMO1P25800 156 aa4.29□□□□□ -1.72
USP54-217ENST00000498213 GNA11P29992 359 aa4.29□□□□□ -1.72
USP54-217ENST00000498213 GDI1P31150 447 aa4.29□□□□□ -1.72
USP54-217ENST00000498213 HOXA13P31271 388 aaPredicted RBP4.29□□□□□ -1.72
USP54-217ENST00000498213 CIITAP33076 1130 aa4.29□□□□□ -1.72
USP54-217ENST00000498213 WASP42768 502 aa4.29□□□□□ -1.72
USP54-217ENST00000498213 VAV2P52735 878 aa4.29□□□□□ -1.72
USP54-217ENST00000498213 HAND2P61296 217 aa4.29□□□□□ -1.72
USP54-217ENST00000498213 MRPS35P82673 323 aaKnown RBP4.29□□□□□ -1.72
USP54-217ENST00000498213 RNASELQ05823 741 aaKnown RBP4.29□□□□□ -1.72
USP54-217ENST00000498213 ZNF844Q08AG5 666 aa4.29□□□□□ -1.72
USP54-217ENST00000498213 LMAN2Q12907 356 aa4.29□□□□□ -1.72
USP54-217ENST00000498213 KRT32Q14532 448 aa4.29□□□□□ -1.72
USP54-217ENST00000498213 GEN1Q17RS7 908 aa4.29□□□□□ -1.72
USP54-217ENST00000498213 LONRF3Q496Y0 759 aa4.29□□□□□ -1.72
USP54-217ENST00000498213 PABPC1LQ4VXU2 614 aaKnown RBP4.29□□□□□ -1.72
USP54-217ENST00000498213 CCDC157Q569K6 752 aa4.29□□□□□ -1.72
USP54-217ENST00000498213 GALNT17Q6IS24 598 aa4.29□□□□□ -1.72
USP54-217ENST00000498213 PDXDC1Q6P996 788 aa4.29□□□□□ -1.72
USP54-217ENST00000498213 C1orf228Q6PIY5 440 aa4.29□□□□□ -1.72
USP54-217ENST00000498213 MTHFD1LQ6UB35 978 aa4.29□□□□□ -1.72
USP54-217ENST00000498213 MOXD1Q6UVY6 613 aa4.29□□□□□ -1.72
USP54-217ENST00000498213 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.29□□□□□ -1.72
USP54-217ENST00000498213 Q6ZNX1 250 aa4.29□□□□□ -1.72
USP54-217ENST00000498213 TOGARAM2Q6ZUX3 1019 aa4.29□□□□□ -1.72
USP54-217ENST00000498213 ZNF410Q86VK4 478 aa4.29□□□□□ -1.72
USP54-217ENST00000498213 ADGRG3Q86Y34 549 aa4.29□□□□□ -1.72
USP54-217ENST00000498213 SRRM1Q8IYB3 904 aaKnown RBP4.29□□□□□ -1.72
USP54-217ENST00000498213 TTC8Q8TAM2 541 aa4.29□□□□□ -1.72
USP54-217ENST00000498213 DNASE1L2Q92874 299 aa4.29□□□□□ -1.72
USP54-217ENST00000498213 RILPL2Q969X0 211 aa4.29□□□□□ -1.72
USP54-217ENST00000498213 CCDC51Q96ER9 411 aa4.29□□□□□ -1.72
USP54-217ENST00000498213 MED8Q96G25 268 aa4.29□□□□□ -1.72
USP54-217ENST00000498213 PIGSQ96S52 555 aa4.29□□□□□ -1.72
USP54-217ENST00000498213 RIT2Q99578 217 aa4.29□□□□□ -1.72
USP54-217ENST00000498213 SMAD5Q99717 465 aaKnown RBP4.29□□□□□ -1.72
USP54-217ENST00000498213 NAP1L4Q99733 375 aaKnown RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms