RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 SP7Q8TDD2 431 aaPredicted RBP12.64□□□□□ -0.39
AFF3-215ENST00000498090 ACTRT2Q8TDY3 377 aa12.64□□□□□ -0.39
AFF3-215ENST00000498090 NRG4Q8WWG1 115 aa12.64□□□□□ -0.39
AFF3-215ENST00000498090 IRGQQ8WZA9 623 aa12.64□□□□□ -0.39
AFF3-215ENST00000498090 IGSF21Q96ID5 467 aa12.64□□□□□ -0.39
AFF3-215ENST00000498090 B3GALT6Q96L58 329 aa12.64□□□□□ -0.39
AFF3-215ENST00000498090 TMEM209Q96SK2 561 aa12.64□□□□□ -0.39
AFF3-215ENST00000498090 SORT1Q99523 831 aa12.64□□□□□ -0.39
AFF3-215ENST00000498090 EBF4Q9BQW3 602 aa12.64□□□□□ -0.39
AFF3-215ENST00000498090 FAM167BQ9BTA0 163 aa12.64□□□□□ -0.39
AFF3-215ENST00000498090 MED10Q9BTT4 135 aa12.64□□□□□ -0.39
AFF3-215ENST00000498090 ZNF395Q9H8N7 513 aaPredicted RBP12.64□□□□□ -0.39
AFF3-215ENST00000498090 CRTAC1Q9NQ79 661 aa12.64□□□□□ -0.39
AFF3-215ENST00000498090 PIGVQ9NUD9 493 aa12.64□□□□□ -0.39
AFF3-215ENST00000498090 TMEM216Q9P0N5 145 aa12.64□□□□□ -0.39
AFF3-215ENST00000498090 MFHAS1Q9Y4C4 1052 aa12.64□□□□□ -0.39
AFF3-215ENST00000498090 SZT2Q5T011 3432 aa12.63□□□□□ -0.39
AFF3-215ENST00000498090 KIAA1671Q9BY89 1806 aa12.63□□□□□ -0.39
AFF3-215ENST00000498090 SLCO1B7G3V0H7 640 aa12.63□□□□□ -0.39
AFF3-215ENST00000498090 ITM2AO43736 263 aa12.63□□□□□ -0.39
AFF3-215ENST00000498090 ARHGEF15O94989 841 aa12.63□□□□□ -0.39
AFF3-215ENST00000498090 SRGAP2BP0DMP2 458 aa12.63□□□□□ -0.39
AFF3-215ENST00000498090 ERVK-10P10266 1014 aa12.63□□□□□ -0.39
AFF3-215ENST00000498090 COL6A2P12110 1019 aa12.63□□□□□ -0.39
AFF3-215ENST00000498090 LAG3P18627 525 aa12.63□□□□□ -0.39
AFF3-215ENST00000498090 FGFR3P22607 806 aa12.63□□□□□ -0.39
AFF3-215ENST00000498090 RPL26P61254 145 aaKnown RBP12.63□□□□□ -0.39
AFF3-215ENST00000498090 CRADDP78560 199 aa12.63□□□□□ -0.39
AFF3-215ENST00000498090 DSG1Q02413 1049 aa12.63□□□□□ -0.39
AFF3-215ENST00000498090 NME3Q13232 169 aa12.63□□□□□ -0.39
AFF3-215ENST00000498090 SHHQ15465 462 aa12.63□□□□□ -0.39
AFF3-215ENST00000498090 RAB41Q5JT25 222 aa12.63□□□□□ -0.39
AFF3-215ENST00000498090 CFAP157Q5JU67 520 aa12.63□□□□□ -0.39
AFF3-215ENST00000498090 SPOUT1Q5T280 376 aaKnown RBP12.63□□□□□ -0.39
AFF3-215ENST00000498090 FAM171A1Q5VUB5 890 aa12.63□□□□□ -0.39
AFF3-215ENST00000498090 BSPRYQ5W0U4 402 aa12.63□□□□□ -0.39
AFF3-215ENST00000498090 PDPK2PQ6A1A2 396 aa12.63□□□□□ -0.39
AFF3-215ENST00000498090 OVOS1Q6IE37 1185 aa12.63□□□□□ -0.39
AFF3-215ENST00000498090 C16orf46Q6P387 395 aa12.63□□□□□ -0.39
AFF3-215ENST00000498090 PAQR9Q6ZVX9 377 aa12.63□□□□□ -0.39
AFF3-215ENST00000498090 BEND5Q7L4P6 421 aa12.63□□□□□ -0.39
AFF3-215ENST00000498090 TAS1R1Q7RTX1 841 aa12.63□□□□□ -0.39
AFF3-215ENST00000498090 STRA8Q7Z7C7 330 aa12.63□□□□□ -0.39
AFF3-215ENST00000498090 CLEC14AQ86T13 490 aa12.63□□□□□ -0.39
AFF3-215ENST00000498090 CCDC117Q8IWD4 279 aaPredicted RBP12.63□□□□□ -0.39
AFF3-215ENST00000498090 KLHDC8BQ8IXV7 354 aa12.63□□□□□ -0.39
AFF3-215ENST00000498090 UNC5BQ8IZJ1 945 aa12.63□□□□□ -0.39
AFF3-215ENST00000498090 KIRREL3Q8IZU9 778 aa12.63□□□□□ -0.39
AFF3-215ENST00000498090 DCLK2Q8N568 766 aa12.63□□□□□ -0.39
AFF3-215ENST00000498090 DNAAF3Q8N9W5 541 aa12.63□□□□□ -0.39
AFF3-215ENST00000498090 SLC7A14Q8TBB6 771 aa12.63□□□□□ -0.39
AFF3-215ENST00000498090 ZNF669Q96BR6 464 aaPredicted RBP12.63□□□□□ -0.39
AFF3-215ENST00000498090 ZNF778Q96MU6 729 aa12.63□□□□□ -0.39
AFF3-215ENST00000498090 TSNARE1Q96NA8 513 aa12.63□□□□□ -0.39
AFF3-215ENST00000498090 ZNF558Q96NG5 402 aa12.63□□□□□ -0.39
AFF3-215ENST00000498090 PANX3Q96QZ0 392 aa12.63□□□□□ -0.39
AFF3-215ENST00000498090 PKMYT1Q99640 499 aa12.63□□□□□ -0.39
AFF3-215ENST00000498090 SYT15Q9BQS2 421 aa12.63□□□□□ -0.39
AFF3-215ENST00000498090 MAGEB5Q9BZ81 275 aa12.63□□□□□ -0.39
AFF3-215ENST00000498090 WDR6Q9NNW5 1121 aaKnown RBP12.63□□□□□ -0.39
AFF3-215ENST00000498090 SPATS2LQ9NUQ6 558 aaKnown RBP12.63□□□□□ -0.39
AFF3-215ENST00000498090 MRGBPQ9NV56 204 aa12.63□□□□□ -0.39
AFF3-215ENST00000498090 DSEQ9UL01 958 aa12.63□□□□□ -0.39
AFF3-215ENST00000498090 INSL6Q9Y581 213 aa12.63□□□□□ -0.39
AFF3-215ENST00000498090 PSAT1Q9Y617 370 aa12.63□□□□□ -0.39
AFF3-215ENST00000498090 A0A088AWK7 358 aa12.62□□□□□ -0.39
AFF3-215ENST00000498090 ZCWPW2A0A1B0GU75 182 aa12.62□□□□□ -0.39
AFF3-215ENST00000498090 ZNF195O14628 629 aa12.62□□□□□ -0.39
AFF3-215ENST00000498090 SYN3O14994 580 aa12.62□□□□□ -0.39
AFF3-215ENST00000498090 TRIM13O60858 407 aa12.62□□□□□ -0.39
AFF3-215ENST00000498090 PRKCGP05129 697 aa12.62□□□□□ -0.39
AFF3-215ENST00000498090 PAX7P23759 505 aa12.62□□□□□ -0.39
AFF3-215ENST00000498090 CRABP2P29373 138 aa12.62□□□□□ -0.39
AFF3-215ENST00000498090 ALDH7A1P49419 539 aaKnown RBP12.62□□□□□ -0.39
AFF3-215ENST00000498090 RABGGTBP53611 331 aa12.62□□□□□ -0.39
AFF3-215ENST00000498090 YWHAHQ04917 246 aaPredicted RBP12.62□□□□□ -0.39
AFF3-215ENST00000498090 ASPHQ12797 758 aa12.62□□□□□ -0.39
AFF3-215ENST00000498090 CDH17Q12864 832 aa12.62□□□□□ -0.39
AFF3-215ENST00000498090 MPP3Q13368 585 aa12.62□□□□□ -0.39
AFF3-215ENST00000498090 UBAP2LQ14157 1087 aaKnown RBP12.62□□□□□ -0.39
AFF3-215ENST00000498090 UGP2Q16851 508 aa12.62□□□□□ -0.39
AFF3-215ENST00000498090 RTP2Q5QGT7 225 aa12.62□□□□□ -0.39
AFF3-215ENST00000498090 VARS2Q5ST30 1063 aaKnown RBP12.62□□□□□ -0.39
AFF3-215ENST00000498090 SYPL2Q5VXT5 272 aa12.62□□□□□ -0.39
AFF3-215ENST00000498090 FSTL4Q6MZW2 842 aa12.62□□□□□ -0.39
AFF3-215ENST00000498090 SETD3Q86TU7 594 aaPredicted RBP12.62□□□□□ -0.39
AFF3-215ENST00000498090 METTL23Q86XA0 190 aa12.62□□□□□ -0.39
AFF3-215ENST00000498090 FIBCD1Q8N539 461 aa12.62□□□□□ -0.39
AFF3-215ENST00000498090 OR52K1Q8NGK4 314 aa12.62□□□□□ -0.39
AFF3-215ENST00000498090 RAD9AQ99638 391 aa12.62□□□□□ -0.39
AFF3-215ENST00000498090 ZBED2Q9BTP6 218 aa12.62□□□□□ -0.39
AFF3-215ENST00000498090 CDH19Q9H159 772 aa12.62□□□□□ -0.39
AFF3-215ENST00000498090 MTIF3Q9H2K0 278 aaKnown RBP12.62□□□□□ -0.39
AFF3-215ENST00000498090 KRT82Q9NSB4 513 aa12.62□□□□□ -0.39
AFF3-215ENST00000498090 PDP2Q9P2J9 529 aa12.62□□□□□ -0.39
AFF3-215ENST00000498090 CDH9Q9ULB4 789 aa12.62□□□□□ -0.39
AFF3-215ENST00000498090 SSX2IPQ9Y2D8 614 aa12.62□□□□□ -0.39
AFF3-215ENST00000498090 AAR2Q9Y312 384 aaKnown RBP12.62□□□□□ -0.39
AFF3-215ENST00000498090 VWA8A3KMH1 1905 aa12.61□□□□□ -0.39
AFF3-215ENST00000498090 A0A096LPK6 155 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms